RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SAMD13Q5VXD3 122 aa12.34□□□□□ -0.43
CLN6-212ENST00000636020 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
CLN6-212ENST00000636020 SLC24A4Q8NFF2 622 aa12.34□□□□□ -0.43
CLN6-212ENST00000636020 TRAV12-2A0A075B6T6 113 aa12.33□□□□□ -0.44
CLN6-212ENST00000636020 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
CLN6-212ENST00000636020 TMEM170AQ8WVE7 144 aa12.33□□□□□ -0.44
CLN6-212ENST00000636020 ACY3Q96HD9 319 aa12.33□□□□□ -0.44
CLN6-212ENST00000636020 C16orf92Q96LL3 132 aa12.33□□□□□ -0.44
CLN6-212ENST00000636020 MTFP1Q9UDX5 166 aa12.33□□□□□ -0.44
CLN6-212ENST00000636020 A0A096LPF7 62 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 HRH1P35367 487 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 UCP3P55916 312 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 SPCS3P61009 180 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 TRIQKQ629K1 86 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 ETFRF1Q6IPR1 90 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 ZNF493Q6ZR52 646 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 TMEM144Q7Z5S9 345 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 TMEM256Q8N2U0 113 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 RNASE8Q8TDE3 154 aaKnown RBP12.32□□□□□ -0.44
CLN6-212ENST00000636020 FAM30AQ9NZY2 134 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 LRP2P98164 4655 aa12.32□□□□□ -0.44
CLN6-212ENST00000636020 A0A0G2JRQ6 117 aa12.31□□□□□ -0.44
CLN6-212ENST00000636020 HTN1P15515 57 aa12.31□□□□□ -0.44
CLN6-212ENST00000636020 MEOX2P50222 304 aa12.31□□□□□ -0.44
CLN6-212ENST00000636020 SSBP1Q04837 148 aaKnown RBP12.31□□□□□ -0.44
CLN6-212ENST00000636020 OR8I2Q8N0Y5 310 aa12.31□□□□□ -0.44
CLN6-212ENST00000636020 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
CLN6-212ENST00000636020 PLA2G10O15496 165 aa12.3□□□□□ -0.44
CLN6-212ENST00000636020 ADAP1O75689 374 aa12.3□□□□□ -0.44
CLN6-212ENST00000636020 ATG12O94817 140 aa12.3□□□□□ -0.44
CLN6-212ENST00000636020 UCP1P25874 307 aa12.3□□□□□ -0.44
CLN6-212ENST00000636020 TSPAN5P62079 268 aa12.3□□□□□ -0.44
CLN6-212ENST00000636020 KLF9Q13886 244 aaPredicted RBP12.3□□□□□ -0.44
CLN6-212ENST00000636020 AARDQ4LEZ3 155 aa12.3□□□□□ -0.44
CLN6-212ENST00000636020 VSIG2Q96IQ7 327 aa12.3□□□□□ -0.44
CLN6-212ENST00000636020 TP53RKQ96S44 253 aa12.3□□□□□ -0.44
CLN6-212ENST00000636020 SLC25A39Q9BZJ4 359 aaPredicted RBP12.3□□□□□ -0.44
CLN6-212ENST00000636020 HEYLQ9NQ87 328 aaPredicted RBP12.3□□□□□ -0.44
CLN6-212ENST00000636020 IGLV5-52A0A0A0MRZ9 124 aa12.29□□□□□ -0.44
CLN6-212ENST00000636020 BOLA2-SMG1P6H3BVE0 249 aa12.29□□□□□ -0.44
CLN6-212ENST00000636020 NXPH4O95158 308 aa12.29□□□□□ -0.44
CLN6-212ENST00000636020 OXTP01178 125 aa12.29□□□□□ -0.44
CLN6-212ENST00000636020 RCVRNP35243 200 aa12.29□□□□□ -0.44
CLN6-212ENST00000636020 ASAH1Q13510 395 aa12.29□□□□□ -0.44
CLN6-212ENST00000636020 OR52E5Q8NH55 327 aa12.29□□□□□ -0.44
CLN6-212ENST00000636020 TMEM263Q8WUH6 116 aaKnown RBP12.29□□□□□ -0.44
CLN6-212ENST00000636020 PKHD1L1Q86WI1 4243 aa12.29□□□□□ -0.44
CLN6-212ENST00000636020 HLA-DMAP28067 261 aa12.28□□□□□ -0.44
CLN6-212ENST00000636020 RND3P61587 244 aa12.28□□□□□ -0.44
CLN6-212ENST00000636020 TOMM5Q8N4H5 51 aa12.28□□□□□ -0.44
CLN6-212ENST00000636020 GAGE12BA1L429 117 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 GAGE7O76087 117 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 GAGE12FP0CL80 117 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 GAGE12GP0CL81 117 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 GAGE12IP0CL82 117 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 INPP1P49441 399 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 ZNF90Q03938 601 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 TMED4Q7Z7H5 227 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 LINC00528Q8N1L1 170 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 TMEM229BQ8NBD8 167 aa12.27□□□□□ -0.45
CLN6-212ENST00000636020 RRNAD1Q96FB5 475 aaKnown RBP12.27□□□□□ -0.45
CLN6-212ENST00000636020 LINC00854A0A1B0GVQ3 168 aa12.26□□□□□ -0.45
CLN6-212ENST00000636020 DEFA1P59665 94 aa12.26□□□□□ -0.45
CLN6-212ENST00000636020 DEFA3P59666 94 aa12.26□□□□□ -0.45
CLN6-212ENST00000636020 AP3S2P59780 193 aa12.26□□□□□ -0.45
CLN6-212ENST00000636020 LYZP61626 148 aa12.26□□□□□ -0.45
CLN6-212ENST00000636020 DEDD2Q8WXF8 326 aa12.26□□□□□ -0.45
CLN6-212ENST00000636020 PPP1R14BQ96C90 147 aa12.26□□□□□ -0.45
CLN6-212ENST00000636020 RSG1Q9BU20 258 aa12.26□□□□□ -0.45
CLN6-212ENST00000636020 IGKV1D-37A0A075B6S9 117 aa12.25□□□□□ -0.45
CLN6-212ENST00000636020 LYRM1O43325 122 aa12.25□□□□□ -0.45
CLN6-212ENST00000636020 PI3P19957 117 aa12.25□□□□□ -0.45
CLN6-212ENST00000636020 BTCP35070 178 aa12.25□□□□□ -0.45
CLN6-212ENST00000636020 GALR1P47211 349 aa12.25□□□□□ -0.45
CLN6-212ENST00000636020 TAS2R19P59542 299 aa12.25□□□□□ -0.45
CLN6-212ENST00000636020 RGS21Q2M5E4 152 aa12.25□□□□□ -0.45
CLN6-212ENST00000636020 IGFL4Q6B9Z1 124 aa12.25□□□□□ -0.45
CLN6-212ENST00000636020 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.25□□□□□ -0.45
CLN6-212ENST00000636020 NTN5Q8WTR8 489 aaPredicted RBP12.25□□□□□ -0.45
CLN6-212ENST00000636020 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.25□□□□□ -0.45
CLN6-212ENST00000636020 TRAV8-2A0A0B4J237 113 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 C3orf85A0A1B0GTC6 90 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 ZNF98A6NK75 572 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 ZFP92A6NM28 416 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 NPIPB6E9PJ23 425 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 PTTG1O95997 202 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 C1QBP02746 253 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 CD3DP04234 171 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 AKAIN1P0CW23 69 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 PGAM2P15259 253 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 PIGPP57054 158 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 TRIM16LQ309B1 348 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 SP6Q3SY56 376 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 STEAP1BQ6NZ63 245 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 SLC25A32Q9H2D1 315 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 TMPRSS5Q9H3S3 457 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 MSRB1Q9NZV6 116 aa12.24□□□□□ -0.45
CLN6-212ENST00000636020 TRAV9-2A0A087WT02 112 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 NAP1L6A6NFF2 107 aa12.23□□□□□ -0.45
CLN6-212ENST00000636020 CEBPZOSA8MTT3 80 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms