RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 MPC2O95563 127 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 SPP1P10451 314 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 FGF7P21781 194 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 FGL1Q08830 312 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 VWC2Q2TAL6 325 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 TMEM41BQ5BJD5 291 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 MORN3Q6PF18 240 aaPredicted RBP12.55□□□□□ -0.4
LIN28B-202ENST00000635857 OR5C1Q8NGR4 320 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 OR1L4Q8NGR5 311 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 UHRF2Q96PU4 802 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 RSG1Q9BU20 258 aa12.55□□□□□ -0.4
LIN28B-202ENST00000635857 HUWE1Q7Z6Z7 4374 aaKnown RBP12.54□□□□□ -0.4
LIN28B-202ENST00000635857 C10orf113Q5VZT2 155 aa12.54□□□□□ -0.4
LIN28B-202ENST00000635857 LINC00305Q7Z4B0 112 aa12.54□□□□□ -0.4
LIN28B-202ENST00000635857 TRPT1Q86TN4 253 aaKnown RBP12.54□□□□□ -0.4
LIN28B-202ENST00000635857 IL17DQ8TAD2 202 aa12.54□□□□□ -0.4
LIN28B-202ENST00000635857 LRRC20Q8TCA0 184 aa12.54□□□□□ -0.4
LIN28B-202ENST00000635857 GATAD1Q8WUU5 269 aa12.54□□□□□ -0.4
LIN28B-202ENST00000635857 RNF183Q96D59 192 aa12.54□□□□□ -0.4
LIN28B-202ENST00000635857 PFDN5Q99471 154 aa12.54□□□□□ -0.4
LIN28B-202ENST00000635857 OVOL2Q9BRP0 275 aa12.54□□□□□ -0.4
LIN28B-202ENST00000635857 KCNIP2Q9NS61 270 aa12.54□□□□□ -0.4
LIN28B-202ENST00000635857 LYL1P12980 280 aa12.53□□□□□ -0.4
LIN28B-202ENST00000635857 B2MP61769 119 aa12.53□□□□□ -0.4
LIN28B-202ENST00000635857 NHLH2Q02577 135 aa12.53□□□□□ -0.4
LIN28B-202ENST00000635857 EBLN2Q6P2I7 272 aa12.53□□□□□ -0.4
LIN28B-202ENST00000635857 ZNF709Q8N972 641 aa12.53□□□□□ -0.4
LIN28B-202ENST00000635857 THAP6Q8TBB0 222 aa12.53□□□□□ -0.4
LIN28B-202ENST00000635857 EDA2RQ9HAV5 297 aa12.53□□□□□ -0.4
LIN28B-202ENST00000635857 RPRMQ9NS64 109 aa12.53□□□□□ -0.4
LIN28B-202ENST00000635857 H0YIZ8 118 aa12.52□□□□□ -0.41
LIN28B-202ENST00000635857 RPL29P47914 159 aaKnown RBP12.52□□□□□ -0.41
LIN28B-202ENST00000635857 CLINT1Q14677 625 aa12.52□□□□□ -0.41
LIN28B-202ENST00000635857 MIC13Q5XKP0 118 aa12.52□□□□□ -0.41
LIN28B-202ENST00000635857 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
LIN28B-202ENST00000635857 MBD2Q9UBB5 411 aa12.52□□□□□ -0.41
LIN28B-202ENST00000635857 C17orf112F2Z3M2 114 aa12.51□□□□□ -0.41
LIN28B-202ENST00000635857 OPCMLQ14982 345 aa12.51□□□□□ -0.41
LIN28B-202ENST00000635857 SPATA31B1PQ5VZV4 182 aa12.51□□□□□ -0.41
LIN28B-202ENST00000635857 FOXI2Q6ZQN5 318 aa12.51□□□□□ -0.41
LIN28B-202ENST00000635857 BPIFA4PQ86YQ2 179 aa12.51□□□□□ -0.41
LIN28B-202ENST00000635857 RARRES2Q99969 163 aa12.51□□□□□ -0.41
LIN28B-202ENST00000635857 DNAJC4Q9NNZ3 241 aa12.51□□□□□ -0.41
LIN28B-202ENST00000635857 SLC39A9Q9NUM3 307 aa12.51□□□□□ -0.41
LIN28B-202ENST00000635857 PXMP4Q9Y6I8 212 aa12.51□□□□□ -0.41
LIN28B-202ENST00000635857 STAB2Q8WWQ8 2551 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 SOCS3O14543 225 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 HLA-DRB4P13762 266 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 RPL12P30050 165 aaKnown RBP12.5□□□□□ -0.41
LIN28B-202ENST00000635857 PRR20EP86478 221 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 PRR20CP86479 221 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 PRR20DP86480 221 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 PRR20BP86481 221 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 PRR20AP86496 221 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 PATE2Q6UY27 113 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 ASB13Q8WXK3 278 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 ATP5SQ99766 215 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 HSPB11Q9Y547 144 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 HLA-DRB4X5D2U9 266 aa12.5□□□□□ -0.41
LIN28B-202ENST00000635857 IFNA5P01569 189 aa12.49□□□□□ -0.41
LIN28B-202ENST00000635857 FCN2Q15485 313 aa12.49□□□□□ -0.41
LIN28B-202ENST00000635857 CHAC2Q8WUX2 184 aa12.49□□□□□ -0.41
LIN28B-202ENST00000635857 SAV1Q9H4B6 383 aaPredicted RBP12.49□□□□□ -0.41
LIN28B-202ENST00000635857 NBEAL2Q6ZNJ1 2754 aa12.49□□□□□ -0.41
LIN28B-202ENST00000635857 TENM3Q9P273 2699 aa12.49□□□□□ -0.41
LIN28B-202ENST00000635857 A0A087X0K7 114 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 H3BMM0 161 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 CXCL2P19875 107 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 CXCL3P19876 107 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 LCN15Q6UWW0 184 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 ZNF738Q8NE65 137 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 OR4B1Q8NGF8 309 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 OR11H2Q8NH07 326 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 SCGB1C1Q8TD33 95 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 TMEM37Q8WXS4 190 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 RNF126Q9BV68 326 aa12.48□□□□□ -0.41
LIN28B-202ENST00000635857 A0A0J9YWU9 116 aa12.47□□□□□ -0.41
LIN28B-202ENST00000635857 IGKV3-20P01619 116 aa12.47□□□□□ -0.41
LIN28B-202ENST00000635857 SLC50A1Q9BRV3 221 aa12.47□□□□□ -0.41
LIN28B-202ENST00000635857 WDR61Q9GZS3 305 aaKnown RBP12.47□□□□□ -0.41
LIN28B-202ENST00000635857 AGRNO00468 2067 aa12.46□□□□□ -0.41
LIN28B-202ENST00000635857 GIPP09681 153 aaPredicted RBP12.46□□□□□ -0.41
LIN28B-202ENST00000635857 C4BPBP20851 252 aa12.46□□□□□ -0.41
LIN28B-202ENST00000635857 CASC10Q5T4H9 136 aa12.46□□□□□ -0.41
LIN28B-202ENST00000635857 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.41
LIN28B-202ENST00000635857 OR11H7Q8NGC8 314 aa12.46□□□□□ -0.41
LIN28B-202ENST00000635857 SMIM3Q9BZL3 60 aa12.46□□□□□ -0.41
LIN28B-202ENST00000635857 DUSP14O95147 198 aaKnown RBP12.45□□□□□ -0.42
LIN28B-202ENST00000635857 OXA1LQ15070 435 aa12.45□□□□□ -0.42
LIN28B-202ENST00000635857 GUK1Q16774 197 aa12.45□□□□□ -0.42
LIN28B-202ENST00000635857 GDF5OSQ5U4N7 250 aa12.45□□□□□ -0.42
LIN28B-202ENST00000635857 A0A0J9YX75 114 aa12.44□□□□□ -0.42
LIN28B-202ENST00000635857 DEFB1P60022 68 aa12.44□□□□□ -0.42
LIN28B-202ENST00000635857 PSG9Q00887 426 aa12.44□□□□□ -0.42
LIN28B-202ENST00000635857 FAM78BQ5VT40 261 aa12.44□□□□□ -0.42
LIN28B-202ENST00000635857 RNF182Q8N6D2 247 aa12.44□□□□□ -0.42
LIN28B-202ENST00000635857 C20orf173Q96LM9 149 aa12.44□□□□□ -0.42
LIN28B-202ENST00000635857 CLUHP3Q96NS8 147 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms