RNA–Protein interactions for RNA: ENST00000628018.2

CAPNS1-215, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-215ENST00000628018 CRYBB3P26998 211 aa19.09■□□□□ 0.65
CAPNS1-215ENST00000628018 CYB561D1Q8N8Q1 229 aa19.09■□□□□ 0.65
CAPNS1-215ENST00000628018 OR4F5Q8NH21 305 aa19.09■□□□□ 0.65
CAPNS1-215ENST00000628018 OR4F4Q96R69 305 aa19.09■□□□□ 0.65
CAPNS1-215ENST00000628018 METTL26Q96S19 204 aa19.09■□□□□ 0.65
CAPNS1-215ENST00000628018 C20orf24Q9BUV8 137 aa19.09■□□□□ 0.65
CAPNS1-215ENST00000628018 U3KQE9 123 aa19.09■□□□□ 0.65
CAPNS1-215ENST00000628018 NBEAP1P0C6P0 100 aa19.08■□□□□ 0.64
CAPNS1-215ENST00000628018 NPPCP23582 126 aa19.08■□□□□ 0.64
CAPNS1-215ENST00000628018 GPHB5Q86YW7 130 aa19.08■□□□□ 0.64
CAPNS1-215ENST00000628018 TMEM190Q8WZ59 177 aa19.08■□□□□ 0.64
CAPNS1-215ENST00000628018 BUB3O43684 328 aa19.07■□□□□ 0.64
CAPNS1-215ENST00000628018 HIST1H1EP10412 219 aaKnown RBP19.07■□□□□ 0.64
CAPNS1-215ENST00000628018 WFDC12Q8WWY7 111 aa19.07■□□□□ 0.64
CAPNS1-215ENST00000628018 TMEM250H0YL14 139 aa19.06■□□□□ 0.64
CAPNS1-215ENST00000628018 ZNF207O43670 478 aaKnown RBP19.06■□□□□ 0.64
CAPNS1-215ENST00000628018 IGLC2P0DOY2 106 aa19.06■□□□□ 0.64
CAPNS1-215ENST00000628018 C18orf65Q6ZTR6 163 aa19.06■□□□□ 0.64
CAPNS1-215ENST00000628018 CCDC28AQ8IWP9 274 aa19.06■□□□□ 0.64
CAPNS1-215ENST00000628018 CARHSP1Q9Y2V2 147 aaKnown RBP19.06■□□□□ 0.64
CAPNS1-215ENST00000628018 IGHV4OR15-8A0A075B7B6 117 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 A0A087WW49 117 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 H3BQ15 152 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 PDE6DO43924 150 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 APOHP02749 345 aaPredicted RBP19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 SNRPCP09234 159 aaKnown RBP19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 SRSF2Q01130 221 aaKnown RBP19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 FAM106AQ4KMX7 169 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 OR4F17Q8NGA8 305 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 C4orf3Q8WVX3 66 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 ZNF586Q9NXT0 402 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 RNF114Q9Y508 228 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 RPL7P18124 248 aaKnown RBP19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 RPEL1Q2QD12 228 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 BLNKQ8WV28 456 aa19.05■□□□□ 0.64
CAPNS1-215ENST00000628018 ZNF320A2RRD8 509 aa19.04■□□□□ 0.64
CAPNS1-215ENST00000628018 GGTLC3B5MD39 225 aa19.04■□□□□ 0.64
CAPNS1-215ENST00000628018 CEBPGP53567 150 aa19.04■□□□□ 0.64
CAPNS1-215ENST00000628018 PROK1P58294 105 aa19.04■□□□□ 0.64
CAPNS1-215ENST00000628018 SOHLH1Q5JUK2 328 aa19.04■□□□□ 0.64
CAPNS1-215ENST00000628018 C1orf194Q5T5A4 169 aa19.04■□□□□ 0.64
CAPNS1-215ENST00000628018 FAM90A2PQ658T7 463 aa19.04■□□□□ 0.64
CAPNS1-215ENST00000628018 OR8I2Q8N0Y5 310 aa19.04■□□□□ 0.64
CAPNS1-215ENST00000628018 NKX6-2Q9C056 277 aaPredicted RBP19.04■□□□□ 0.64
CAPNS1-215ENST00000628018 F6UZH7 168 aa19.03■□□□□ 0.64
CAPNS1-215ENST00000628018 APOC3P02656 99 aa19.03■□□□□ 0.64
CAPNS1-215ENST00000628018 CD28P10747 220 aa19.03■□□□□ 0.64
CAPNS1-215ENST00000628018 K7EMT4 169 aa19.02■□□□□ 0.64
CAPNS1-215ENST00000628018 HAX1O00165 279 aa19.02■□□□□ 0.64
CAPNS1-215ENST00000628018 MYCNOSP40205 109 aa19.02■□□□□ 0.64
CAPNS1-215ENST00000628018 SUMO1P63165 101 aaKnown RBP19.02■□□□□ 0.64
CAPNS1-215ENST00000628018 KHDC1LQ5JSQ8 128 aa19.02■□□□□ 0.64
CAPNS1-215ENST00000628018 GPR82Q96P67 336 aa19.02■□□□□ 0.64
CAPNS1-215ENST00000628018 TRBV19A0A075B6N1 114 aa19.01■□□□□ 0.63
CAPNS1-215ENST00000628018 H3BTX0 84 aa19.01■□□□□ 0.63
CAPNS1-215ENST00000628018 RANP62826 216 aaKnown RBP19.01■□□□□ 0.63
CAPNS1-215ENST00000628018 DAZ1Q9NQZ3 744 aaKnown RBP19.01■□□□□ 0.63
CAPNS1-215ENST00000628018 SMAD5-AS1Q9Y6J3 95 aa19.01■□□□□ 0.63
CAPNS1-215ENST00000628018 IGHV3OR16-13A0A075B7E8 117 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 IGHV3-49A0A0A0MS15 119 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 IGHV3-74A0A0B4J1X5 117 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 IGHV3-66A0A0C4DH42 116 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 KLHL30-AS1Q8NEE0 82 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 C17orf77Q96MU5 243 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 LGALS9O00182 355 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 NDUFB4O95168 129 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 HOXD3P31249 432 aaPredicted RBP19■□□□□ 0.63
CAPNS1-215ENST00000628018 GUCA2BQ16661 112 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 DEFB136Q30KP8 78 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 TM4SF20Q53R12 229 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 HIST2H2BDQ6DRA6 164 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 C16orf54Q6UWD8 224 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 REC114Q7Z4M0 266 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 C11orf44Q8N8P7 122 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 C11orf52Q96A22 123 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 ELOVL1Q9BW60 279 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 UFC1Q9Y3C8 167 aa19■□□□□ 0.63
CAPNS1-215ENST00000628018 SCO2A0A1W2PP80 73 aa18.99■□□□□ 0.63
CAPNS1-215ENST00000628018 IGHV7-4-1A0A0J9YVY3 117 aa18.98■□□□□ 0.63
CAPNS1-215ENST00000628018 LINC01619G3V211 115 aa18.98■□□□□ 0.63
CAPNS1-215ENST00000628018 PDE6HQ13956 83 aa18.98■□□□□ 0.63
CAPNS1-215ENST00000628018 OR11H1Q8NG94 326 aa18.98■□□□□ 0.63
CAPNS1-215ENST00000628018 GLMPQ8WWB7 406 aa18.98■□□□□ 0.63
CAPNS1-215ENST00000628018 CITED2Q99967 270 aaPredicted RBP18.98■□□□□ 0.63
CAPNS1-215ENST00000628018 PARLQ9H300 379 aa18.98■□□□□ 0.63
CAPNS1-215ENST00000628018 Q9H3A6 140 aa18.98■□□□□ 0.63
CAPNS1-215ENST00000628018 TSSC4Q9Y5U2 329 aaPredicted RBP18.98■□□□□ 0.63
CAPNS1-215ENST00000628018 A0A087X0K7 114 aa18.97■□□□□ 0.63
CAPNS1-215ENST00000628018 A0A1W2PS18 150 aa18.97■□□□□ 0.63
CAPNS1-215ENST00000628018 A8MWP6 167 aa18.97■□□□□ 0.63
CAPNS1-215ENST00000628018 GALR1P47211 349 aa18.97■□□□□ 0.63
CAPNS1-215ENST00000628018 KLF5Q13887 457 aaPredicted RBP18.97■□□□□ 0.63
CAPNS1-215ENST00000628018 LYPD1Q8N2G4 141 aa18.97■□□□□ 0.63
CAPNS1-215ENST00000628018 OR1N2Q8NGR9 330 aa18.97■□□□□ 0.63
CAPNS1-215ENST00000628018 RPUSD4Q96CM3 377 aaKnown RBP18.97■□□□□ 0.63
CAPNS1-215ENST00000628018 PGPA6NDG6 321 aa18.96■□□□□ 0.63
CAPNS1-215ENST00000628018 SLC17A3O00476 420 aa18.96■□□□□ 0.63
CAPNS1-215ENST00000628018 ATF4P18848 351 aaPredicted RBP18.96■□□□□ 0.63
CAPNS1-215ENST00000628018 SYNJ2BPP57105 145 aa18.96■□□□□ 0.63
CAPNS1-215ENST00000628018 C1QL4Q86Z23 238 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms