RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 TMEM189A5PLL7 270 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 A8MTW9 85 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 FNDC10F2Z333 226 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 H3BRN7 92 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 PLA2G10O15496 165 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 HYPMO75409 117 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 SCGB1D2O95969 90 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 METTL15P1P0C7V9 234 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 PLP1P60201 277 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 DLK1P80370 383 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 IAH1Q2TAA2 248 aaPredicted RBP8.68□□□□□ -1.02
UBR1-212ENST00000627960 SCRT1Q9BWW7 348 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 SLC25A39Q9BZJ4 359 aaPredicted RBP8.68□□□□□ -1.02
UBR1-212ENST00000627960 NPVFQ9HCQ7 196 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 GSKIPQ9P0R6 139 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 DOK5Q9P104 306 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 RFNGQ9Y644 331 aa8.68□□□□□ -1.02
UBR1-212ENST00000627960 TRAV8-2A0A0B4J237 113 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 TSC22D2O75157 780 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 LINC00869P0C866 280 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 SPART-AS1P0CW21 52 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 TAS2R30P59541 319 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 RAP2BP61225 183 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 RRAS2P62070 204 aaPredicted RBP8.67□□□□□ -1.02
UBR1-212ENST00000627960 SELENOTP62341 195 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 AMTNQ6UX39 209 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 OR10P1Q8NGE3 313 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 SHANK2-AS3Q9BTD1 123 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 NDUFA13Q9P0J0 144 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 HIGD1AQ9Y241 93 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 GOLT1BQ9Y3E0 138 aa8.67□□□□□ -1.02
UBR1-212ENST00000627960 K7EPK0 472 aa8.66□□□□□ -1.02
UBR1-212ENST00000627960 LYRM1O43325 122 aa8.66□□□□□ -1.02
UBR1-212ENST00000627960 AMBPP02760 352 aa8.66□□□□□ -1.02
UBR1-212ENST00000627960 OR5G3P0C626 314 aa8.66□□□□□ -1.02
UBR1-212ENST00000627960 EMP1P54849 157 aa8.66□□□□□ -1.02
UBR1-212ENST00000627960 IGFL4Q6B9Z1 124 aa8.66□□□□□ -1.02
UBR1-212ENST00000627960 C20orf85Q9H1P6 137 aa8.66□□□□□ -1.02
UBR1-212ENST00000627960 MGAT4CQ9UBM8 478 aa8.66□□□□□ -1.02
UBR1-212ENST00000627960 RCL1Q9Y2P8 373 aaKnown RBP8.66□□□□□ -1.02
UBR1-212ENST00000627960 C7orf66A4D0T2 115 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 DUSP14O95147 198 aaKnown RBP8.65□□□□□ -1.02
UBR1-212ENST00000627960 HBE1P02100 147 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 MBPP02686 304 aaPredicted RBP8.65□□□□□ -1.02
UBR1-212ENST00000627960 TCRBP04435 133 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 RPL7P18124 248 aaKnown RBP8.65□□□□□ -1.02
UBR1-212ENST00000627960 FGL1Q08830 312 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 ARL16Q0P5N6 197 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 TEPPQ6URK8 271 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 PATE2Q6UY27 113 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 S100A7AQ86SG5 101 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 RNF182Q8N6D2 247 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 IGF2BP2-AS1Q96M15 143 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 UHRF2Q96PU4 802 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 ARL6Q9H0F7 186 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 DKK2Q9UBU2 259 aa8.65□□□□□ -1.02
UBR1-212ENST00000627960 A0A087X0K7 114 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 TEX48A0A1B0GUV7 120 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 LOC102723971A0A1B0GUV8 181 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 CCSO14618 274 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 CNN1P51911 297 aaKnown RBP8.64□□□□□ -1.03
UBR1-212ENST00000627960 SLC38A11Q08AI6 406 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 RRN3P1Q2M238 152 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 PXDC1Q5TGL8 231 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 FAM222AQ5U5X8 452 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 OR11H7Q8NGC8 314 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 NDUFAF3Q9BU61 184 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 GGACTQ9BVM4 153 aa8.64□□□□□ -1.03
UBR1-212ENST00000627960 TRAV6A0A075B6T7 132 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 L7N2F9 121 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 GOSR2O14653 212 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 AGPAT2O15120 278 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 VAMP2P63027 116 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 ZNF846Q147U1 533 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 OXA1LQ15070 435 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 ZNF546Q86UE3 836 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 ZNF738Q8NE65 137 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 ZNF431Q8TF32 576 aaPredicted RBP8.63□□□□□ -1.03
UBR1-212ENST00000627960 SEC22CQ9BRL7 303 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 NIPSNAP3BQ9BS92 247 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 TMEM208Q9BTX3 173 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 ARV1Q9H2C2 271 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 RNF24Q9Y225 148 aa8.63□□□□□ -1.03
UBR1-212ENST00000627960 YTHDF2Q9Y5A9 579 aaKnown RBP8.63□□□□□ -1.03
UBR1-212ENST00000627960 FAM25EA8MYX2 175 aa8.62□□□□□ -1.03
UBR1-212ENST00000627960 M0R2Z0 102 aa8.62□□□□□ -1.03
UBR1-212ENST00000627960 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
UBR1-212ENST00000627960 CRXO43186 299 aaPredicted RBP8.62□□□□□ -1.03
UBR1-212ENST00000627960 P0DMU3 169 aa8.62□□□□□ -1.03
UBR1-212ENST00000627960 FAM231AP0DMU4 169 aa8.62□□□□□ -1.03
UBR1-212ENST00000627960 FAM231CP0DMU5 169 aa8.62□□□□□ -1.03
UBR1-212ENST00000627960 CXCL3P19876 107 aa8.62□□□□□ -1.03
UBR1-212ENST00000627960 PSG3Q16557 428 aa8.62□□□□□ -1.03
UBR1-212ENST00000627960 SPINK13Q1W4C9 94 aa8.62□□□□□ -1.03
UBR1-212ENST00000627960 FAM210BQ96KR6 192 aa8.62□□□□□ -1.03
UBR1-212ENST00000627960 LSM5Q9Y4Y9 91 aaKnown RBP8.62□□□□□ -1.03
UBR1-212ENST00000627960 C5orf51A6NDU8 294 aa8.61□□□□□ -1.03
UBR1-212ENST00000627960 INSP01308 110 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms