RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TPSG1Q9NRR2 321 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 A1L4Q6 167 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
LDB3-209ENST00000623056 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 FAM169BQ8N8A8 192 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 THYN1Q9P016 225 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 LINC00312Q9Y6C7 94 aa11.25□□□□□ -0.61
LDB3-209ENST00000623056 IGHV3-21A0A0B4J1V1 117 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 APOBEC3AP31941 199 aaPredicted RBP11.24□□□□□ -0.61
LDB3-209ENST00000623056 GLRXP35754 106 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 TNFAIP6P98066 277 aaPredicted RBP11.24□□□□□ -0.61
LDB3-209ENST00000623056 C8orf46Q8TAG6 207 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 RAB37Q96AX2 223 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 PROCRQ9UNN8 238 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 CHTOPQ9Y3Y2 248 aaKnown RBP11.24□□□□□ -0.61
LDB3-209ENST00000623056 LOC400499M0QZD8 3231 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 PIEZO1Q92508 2521 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 SLC25A17O43808 307 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 CCL3L1P16619 93 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 HOXB4P17483 251 aaPredicted RBP11.24□□□□□ -0.61
LDB3-209ENST00000623056 ADAMTSL5Q6ZMM2 481 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 DEFB124Q8NES8 71 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 OR9G4Q8NGQ1 327 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 JKAMPQ9P055 326 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 ZFHX4Q86UP3 3567 aa11.24□□□□□ -0.61
LDB3-209ENST00000623056 SPENQ96T58 3664 aaKnown RBP11.23□□□□□ -0.61
LDB3-209ENST00000623056 IGLV3-9A0A075B6K5 115 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 LGALS9BQ3B8N2 356 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 LGALS9CQ6DKI2 356 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 ASCL2Q99929 193 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 LOC389332A0A1B0GUA5 103 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 SPAARA0A1B0GVQ0 90 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 A0A1W2PPM0 123 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 IGHV1-46P01743 117 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 PLP1P60201 277 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 CACNG7P62955 275 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 MRGPRG-AS1Q2M3A8 158 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 RITA1Q96K30 269 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 HIGD1AQ9Y241 93 aa11.23□□□□□ -0.61
LDB3-209ENST00000623056 SVILO95425 2214 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 A0A1B0GW15 77 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 SIVA1O15304 175 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 ZADH2Q8N4Q0 377 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 OR4X2Q8NGF9 303 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 TPPP3Q9BW30 176 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 SIGLEC8Q9NYZ4 499 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 SPCS1Q9Y6A9 102 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 CFAP47Q6ZTR5 3102 aa11.22□□□□□ -0.61
LDB3-209ENST00000623056 TRBV6-1A0A0K0K1D8 114 aa11.21□□□□□ -0.61
LDB3-209ENST00000623056 D6R8Y8 96 aa11.21□□□□□ -0.61
LDB3-209ENST00000623056 CIDEAO60543 219 aa11.21□□□□□ -0.61
LDB3-209ENST00000623056 APELAP0DMC3 54 aa11.21□□□□□ -0.61
LDB3-209ENST00000623056 TMEM11P17152 192 aa11.21□□□□□ -0.61
LDB3-209ENST00000623056 VMA21Q3ZAQ7 101 aa11.21□□□□□ -0.61
LDB3-209ENST00000623056 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.61
LDB3-209ENST00000623056 INSIG2Q9Y5U4 225 aa11.21□□□□□ -0.61
LDB3-209ENST00000623056 TNFRSF1AP19438 455 aa11.21□□□□□ -0.62
LDB3-209ENST00000623056 LYZP61626 148 aa11.21□□□□□ -0.62
LDB3-209ENST00000623056 PLCE1Q9P212 2302 aa11.21□□□□□ -0.62
LDB3-209ENST00000623056 PRB4P10163 310 aaPredicted RBP11.2□□□□□ -0.62
LDB3-209ENST00000623056 FXYD7P58549 80 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 RBPJQ06330 500 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 PRSS57Q6UWY2 283 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 PCP2Q8IVA1 136 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 ABHD17AQ96GS6 310 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 TMEM14CQ9P0S9 112 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 SERTM2A0A1B0GWG4 89 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 LGALS7P47929 136 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 TEX36Q5VZQ5 186 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 CLEC2AQ6UVW9 174 aa11.2□□□□□ -0.62
LDB3-209ENST00000623056 SLC25A39Q9BZJ4 359 aaPredicted RBP11.2□□□□□ -0.62
LDB3-209ENST00000623056 CRIP1P50238 77 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 MEF2CQ06413 473 aaPredicted RBP11.19□□□□□ -0.62
LDB3-209ENST00000623056 TMEM200BQ69YZ2 307 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 ZNF493Q6ZR52 646 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 TMEM75Q8N9X5 138 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 PRSS33Q8NF86 280 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 TMEM186Q96B77 213 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 ABCA1O95477 2261 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 FTH1P19P0C7X4 201 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 CEACAM3P40198 252 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 NMUP48645 174 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 Q6AWC8 147 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 ZNF414Q96IQ9 312 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 PRELID3AQ96N28 172 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 U3KQK5 164 aa11.19□□□□□ -0.62
LDB3-209ENST00000623056 FCN3O75636 299 aa11.18□□□□□ -0.62
LDB3-209ENST00000623056 HBDP02042 147 aa11.18□□□□□ -0.62
LDB3-209ENST00000623056 SMIM17P0DL12 118 aa11.18□□□□□ -0.62
LDB3-209ENST00000623056 SRSF6Q13247 344 aaKnown RBP11.18□□□□□ -0.62
LDB3-209ENST00000623056 PSG8Q9UQ74 426 aa11.18□□□□□ -0.62
LDB3-209ENST00000623056 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
LDB3-209ENST00000623056 FABP2P12104 132 aa11.18□□□□□ -0.62
LDB3-209ENST00000623056 TIMM23BQ5SRD1 257 aa11.18□□□□□ -0.62
LDB3-209ENST00000623056 AMN1Q8IY45 258 aa11.18□□□□□ -0.62
LDB3-209ENST00000623056 C17orf77Q96MU5 243 aa11.18□□□□□ -0.62
LDB3-209ENST00000623056 IGHV3-72A0A0B4J1Y9 119 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms