RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 PRELID1Q9Y255 219 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 PGPEP1LA6NFU8 196 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 PEX7O00628 323 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 IGHG4P01861 327 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 MYCNOSP40205 109 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 TCEAL7Q9BRU2 100 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 CTDSP1Q9GZU7 261 aa16.59■□□□□ 0.25
SPAST-204ENST00000621856 HECTD1Q9ULT8 2610 aa16.58■□□□□ 0.24
SPAST-204ENST00000621856 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.58■□□□□ 0.24
SPAST-204ENST00000621856 C9JCJ5 164 aa16.58■□□□□ 0.24
SPAST-204ENST00000621856 IGLC2P0DOY2 106 aa16.58■□□□□ 0.24
SPAST-204ENST00000621856 TMEM86BQ8N661 226 aa16.58■□□□□ 0.24
SPAST-204ENST00000621856 OR4X2Q8NGF9 303 aa16.58■□□□□ 0.24
SPAST-204ENST00000621856 MRPS12O15235 138 aaKnown RBP16.57■□□□□ 0.24
SPAST-204ENST00000621856 RPL7P18124 248 aaKnown RBP16.57■□□□□ 0.24
SPAST-204ENST00000621856 CNN1P51911 297 aaKnown RBP16.57■□□□□ 0.24
SPAST-204ENST00000621856 GNG5P63218 68 aa16.57■□□□□ 0.24
SPAST-204ENST00000621856 CENPWQ5EE01 88 aa16.57■□□□□ 0.24
SPAST-204ENST00000621856 OTORQ9NRC9 128 aa16.57■□□□□ 0.24
SPAST-204ENST00000621856 EPDR1Q9UM22 224 aa16.57■□□□□ 0.24
SPAST-204ENST00000621856 RPH3ALQ9UNE2 315 aa16.57■□□□□ 0.24
SPAST-204ENST00000621856 FASNP49327 2511 aaKnown RBP16.57■□□□□ 0.24
SPAST-204ENST00000621856 TRBV19A0A075B6N1 114 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 TMEM89A2RUT3 159 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 COLCA2A8K830 154 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 TRBV12-3P01733 135 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 GNG4P50150 75 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 RPL15P61313 204 aaKnown RBP16.56■□□□□ 0.24
SPAST-204ENST00000621856 SLC35B1P78383 322 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 OR8I2Q8N0Y5 310 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 OCC1Q8TAD7 63 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 HIST1H2BAQ96A08 127 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 CLDN34H7C241 214 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 PSMB8P28062 276 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 FAM24BQ8N5W8 94 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 C5orf17Q8NAS9 161 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 METTL26Q96S19 204 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 TMEM242Q9NWH2 141 aa16.56■□□□□ 0.24
SPAST-204ENST00000621856 CXorf65A6NEN9 183 aa16.55■□□□□ 0.24
SPAST-204ENST00000621856 C17orf77Q96MU5 243 aa16.55■□□□□ 0.24
SPAST-204ENST00000621856 LY96Q9Y6Y9 160 aa16.55■□□□□ 0.24
SPAST-204ENST00000621856 TLN2Q9Y4G6 2542 aa16.55■□□□□ 0.24
SPAST-204ENST00000621856 H7BYZ3 331 aa16.54■□□□□ 0.24
SPAST-204ENST00000621856 ZNF207O43670 478 aaKnown RBP16.54■□□□□ 0.24
SPAST-204ENST00000621856 C10orf99Q6UWK7 81 aa16.54■□□□□ 0.24
SPAST-204ENST00000621856 CLPSL1A2RUU4 121 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 TAS2R60P59551 318 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 EXOC3-AS1Q8N2X6 119 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 CMTM2Q8TAZ6 248 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 ANAPC16Q96DE5 110 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 LINC00479Q96M42 142 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 URGCP-MRPS24S4R325 110 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 DNAJC9-AS1A6NH13 148 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 NDUFA4O00483 81 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 ATF4P18848 351 aaPredicted RBP16.53■□□□□ 0.24
SPAST-204ENST00000621856 TEX38Q6PEX7 206 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 ATG101Q9BSB4 218 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 CDC42EP3Q9UKI2 254 aa16.53■□□□□ 0.24
SPAST-204ENST00000621856 TRAV34A0A0B4J273 112 aa16.52■□□□□ 0.24
SPAST-204ENST00000621856 SLC17A3O00476 420 aa16.52■□□□□ 0.24
SPAST-204ENST00000621856 UBE2G1P62253 170 aa16.52■□□□□ 0.24
SPAST-204ENST00000621856 LYPD1Q8N2G4 141 aa16.52■□□□□ 0.24
SPAST-204ENST00000621856 IGF2BP2-AS1Q96M15 143 aa16.52■□□□□ 0.24
SPAST-204ENST00000621856 OR5B12Q96R08 314 aa16.52■□□□□ 0.24
SPAST-204ENST00000621856 MXRA5Q9NR99 2828 aa16.52■□□□□ 0.24
SPAST-204ENST00000621856 ZNF469Q96JG9 3925 aaPredicted RBP16.52■□□□□ 0.23
SPAST-204ENST00000621856 IGHV3-66A0A0C4DH42 116 aa16.51■□□□□ 0.23
SPAST-204ENST00000621856 BUB3O43684 328 aa16.51■□□□□ 0.23
SPAST-204ENST00000621856 FOXE3Q13461 319 aa16.51■□□□□ 0.23
SPAST-204ENST00000621856 PDE6HQ13956 83 aa16.51■□□□□ 0.23
SPAST-204ENST00000621856 FAM209BQ5JX69 171 aa16.51■□□□□ 0.23
SPAST-204ENST00000621856 SIGLEC15Q6ZMC9 328 aa16.51■□□□□ 0.23
SPAST-204ENST00000621856 Q8N2B8 174 aa16.51■□□□□ 0.23
SPAST-204ENST00000621856 SFRP2Q96HF1 295 aa16.51■□□□□ 0.23
SPAST-204ENST00000621856 PEF1Q9UBV8 284 aaKnown RBP16.51■□□□□ 0.23
SPAST-204ENST00000621856 IGHV3-49A0A0A0MS15 119 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 K7EN84 100 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 GGCTO75223 188 aaKnown RBP16.5■□□□□ 0.23
SPAST-204ENST00000621856 TCRAP04437 139 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 CD99P14209 185 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 SCGB2A2Q13296 93 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 TMEM190Q8WZ59 177 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 YPEL4Q96NS1 127 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 AAMDCQ9H7C9 122 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 IGHV3OR16-13A0A075B7E8 117 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 IGHV3-74A0A0B4J1X5 117 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 PPP1R2P9O14990 202 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 ELANEP08246 267 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 ELOBQ15370 118 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 TMEM183BQ1AE95 376 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 GPR82Q96P67 336 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 SMAD5-AS1Q9Y6J3 95 aa16.5■□□□□ 0.23
SPAST-204ENST00000621856 ZNF785A8K8V0 405 aa16.49■□□□□ 0.23
SPAST-204ENST00000621856 ISLRO14498 428 aa16.49■□□□□ 0.23
SPAST-204ENST00000621856 APOHP02749 345 aaPredicted RBP16.49■□□□□ 0.23
SPAST-204ENST00000621856 RPLP1P05386 114 aaKnown RBP16.49■□□□□ 0.23
SPAST-204ENST00000621856 MGST1P10620 155 aaKnown RBP16.49■□□□□ 0.23
SPAST-204ENST00000621856 GALR1P47211 349 aa16.49■□□□□ 0.23
SPAST-204ENST00000621856 PSG9Q00887 426 aa16.49■□□□□ 0.23
SPAST-204ENST00000621856 C1orf194Q5T5A4 169 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms