RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 GCSAMLQ5JQS6 135 aa10.61□□□□□ -0.71
CBWD3-217ENST00000621474 LINC00305Q7Z4B0 112 aa10.61□□□□□ -0.71
CBWD3-217ENST00000621474 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
CBWD3-217ENST00000621474 RSG1Q9BU20 258 aa10.61□□□□□ -0.71
CBWD3-217ENST00000621474 TENM3Q9P273 2699 aa10.61□□□□□ -0.71
CBWD3-217ENST00000621474 PARD6GQ9BYG4 376 aaPredicted RBP10.6□□□□□ -0.71
CBWD3-217ENST00000621474 RFNGQ9Y644 331 aa10.6□□□□□ -0.71
CBWD3-217ENST00000621474 ELOA3CA0A087WX78 387 aaPredicted RBP10.59□□□□□ -0.71
CBWD3-217ENST00000621474 ZNF688P0C7X2 276 aa10.59□□□□□ -0.71
CBWD3-217ENST00000621474 Q6ZRG5 221 aa10.59□□□□□ -0.71
CBWD3-217ENST00000621474 OR11H4Q8NGC9 324 aa10.59□□□□□ -0.71
CBWD3-217ENST00000621474 ASCL2Q99929 193 aa10.59□□□□□ -0.71
CBWD3-217ENST00000621474 TUBA4BQ9H853 241 aa10.59□□□□□ -0.71
CBWD3-217ENST00000621474 DNAJC4Q9NNZ3 241 aa10.59□□□□□ -0.71
CBWD3-217ENST00000621474 COX7A2P2O60397 106 aa10.58□□□□□ -0.72
CBWD3-217ENST00000621474 DEFB131AP59861 70 aa10.58□□□□□ -0.72
CBWD3-217ENST00000621474 C10orf113Q5VZT2 155 aa10.58□□□□□ -0.72
CBWD3-217ENST00000621474 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.58□□□□□ -0.72
CBWD3-217ENST00000621474 ST6GAL2Q96JF0 529 aa10.58□□□□□ -0.72
CBWD3-217ENST00000621474 HAGHQ16775 308 aa10.58□□□□□ -0.72
CBWD3-217ENST00000621474 GPR82Q96P67 336 aa10.58□□□□□ -0.72
CBWD3-217ENST00000621474 TRAV5A0A0B4J249 113 aa10.57□□□□□ -0.72
CBWD3-217ENST00000621474 ARPC5O15511 151 aa10.57□□□□□ -0.72
CBWD3-217ENST00000621474 GALR1P47211 349 aa10.57□□□□□ -0.72
CBWD3-217ENST00000621474 INO80EQ8NBZ0 244 aaPredicted RBP10.57□□□□□ -0.72
CBWD3-217ENST00000621474 OR1L4Q8NGR5 311 aa10.57□□□□□ -0.72
CBWD3-217ENST00000621474 GATAD1Q8WUU5 269 aa10.57□□□□□ -0.72
CBWD3-217ENST00000621474 PFDN5Q99471 154 aa10.57□□□□□ -0.72
CBWD3-217ENST00000621474 TM2D3Q9BRN9 247 aa10.57□□□□□ -0.72
CBWD3-217ENST00000621474 SEPSECSQ9HD40 501 aaKnown RBP10.57□□□□□ -0.72
CBWD3-217ENST00000621474 IFNA5P01569 189 aa10.56□□□□□ -0.72
CBWD3-217ENST00000621474 RPL7P18124 248 aaKnown RBP10.56□□□□□ -0.72
CBWD3-217ENST00000621474 S100A7P31151 101 aa10.56□□□□□ -0.72
CBWD3-217ENST00000621474 PSMG4Q5JS54 123 aa10.56□□□□□ -0.72
CBWD3-217ENST00000621474 NBEAL2Q6ZNJ1 2754 aa10.56□□□□□ -0.72
CBWD3-217ENST00000621474 hCG_2014768A0A024R1R8 64 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 A0A087X0K7 114 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 A0A1B0GVG6 124 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 C17orf112F2Z3M2 114 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 CMC4P56277 68 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-217ENST00000621474 ZNF266Q14584 549 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 SPATA31B1PQ5VZV4 182 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 LOC102724200A0A096LPH7 203 aaPredicted RBP10.55□□□□□ -0.72
CBWD3-217ENST00000621474 TRAV8-2A0A0B4J237 113 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 SNRPCP09234 159 aaKnown RBP10.55□□□□□ -0.72
CBWD3-217ENST00000621474 IGLC2P0DOY2 106 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 PSMB3P49720 205 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 DEFB1P60022 68 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 SNRPD3P62318 126 aaKnown RBP10.55□□□□□ -0.72
CBWD3-217ENST00000621474 FAM78BQ5VT40 261 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 RPL7L1Q6DKI1 246 aaKnown RBP10.55□□□□□ -0.72
CBWD3-217ENST00000621474 S100A7AQ86SG5 101 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 ZNF709Q8N972 641 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 SCGB1C1Q8TD33 95 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 FAM167A-AS1Q96KT0 104 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 C20orf173Q96LM9 149 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 KCNIP2Q9NS61 270 aa10.55□□□□□ -0.72
CBWD3-217ENST00000621474 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 HMSDA8MTL9 139 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 H3BQ15 152 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 ISLRO14498 428 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 MEOX2P50222 304 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 FFAR4Q5NUL3 377 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 IGFL4Q6B9Z1 124 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 BPIFA4PQ86YQ2 179 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 HSD17B11Q8NBQ5 300 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 SLC25A2Q9BXI2 301 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 MFFQ9GZY8 342 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 CYTL1Q9NRR1 136 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 TIMM9Q9Y5J7 89 aa10.54□□□□□ -0.72
CBWD3-217ENST00000621474 KNCNA6PVL3 124 aa10.53□□□□□ -0.72
CBWD3-217ENST00000621474 NHLRC4P0CG21 123 aaPredicted RBP10.53□□□□□ -0.72
CBWD3-217ENST00000621474 RPL35AP18077 110 aaKnown RBP10.53□□□□□ -0.72
CBWD3-217ENST00000621474 ATP6V0CP27449 155 aa10.53□□□□□ -0.72
CBWD3-217ENST00000621474 ZNF345Q14585 488 aa10.53□□□□□ -0.72
CBWD3-217ENST00000621474 GDF5OSQ5U4N7 250 aa10.53□□□□□ -0.72
CBWD3-217ENST00000621474 MIR17HGQ75NE6 70 aa10.53□□□□□ -0.72
CBWD3-217ENST00000621474 TCTE3Q8IZS6 198 aa10.53□□□□□ -0.72
CBWD3-217ENST00000621474 SH3BGRL3Q9H299 93 aa10.53□□□□□ -0.72
CBWD3-217ENST00000621474 RNF24Q9Y225 148 aa10.53□□□□□ -0.72
CBWD3-217ENST00000621474 SLC17A3O00476 420 aa10.52□□□□□ -0.73
CBWD3-217ENST00000621474 ATF4P18848 351 aaPredicted RBP10.52□□□□□ -0.73
CBWD3-217ENST00000621474 CXCL2P19875 107 aa10.52□□□□□ -0.73
CBWD3-217ENST00000621474 CD300CQ08708 224 aa10.52□□□□□ -0.73
CBWD3-217ENST00000621474 TRPT1Q86TN4 253 aaKnown RBP10.52□□□□□ -0.73
CBWD3-217ENST00000621474 RNF182Q8N6D2 247 aa10.52□□□□□ -0.73
CBWD3-217ENST00000621474 SAT2Q96F10 170 aaPredicted RBP10.52□□□□□ -0.73
CBWD3-217ENST00000621474 C16orf92Q96LL3 132 aa10.52□□□□□ -0.73
CBWD3-217ENST00000621474 HRH4Q9H3N8 390 aa10.52□□□□□ -0.73
CBWD3-217ENST00000621474 H3BTX0 84 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 PYYP10082 97 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 HLA-DMBP28068 263 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 ACTL10Q5JWF8 245 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 SAMD13Q5VXD3 122 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 KCNRGQ8N5I3 272 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 OR2G3Q8NGZ4 309 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 ZNF503Q96F45 646 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 LINC00052Q96N35 136 aa10.51□□□□□ -0.73
CBWD3-217ENST00000621474 PSMG3Q9BT73 122 aaPredicted RBP10.51□□□□□ -0.73
CBWD3-217ENST00000621474 MRPL32Q9BYC8 188 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms