RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 TMEM11P17152 192 aa12.79□□□□□ -0.36
DKC1-213ENST00000620277 ITGB1BP1O14713 200 aa12.79□□□□□ -0.36
DKC1-213ENST00000620277 FSTL3O95633 263 aa12.79□□□□□ -0.36
DKC1-213ENST00000620277 LINC00614P0C842 121 aa12.79□□□□□ -0.36
DKC1-213ENST00000620277 IGFL2Q6UWQ7 119 aa12.79□□□□□ -0.36
DKC1-213ENST00000620277 PNKDQ8N490 385 aa12.79□□□□□ -0.36
DKC1-213ENST00000620277 LINC01560Q8TB33 94 aa12.79□□□□□ -0.36
DKC1-213ENST00000620277 ONECUT1Q9UBC0 465 aa12.79□□□□□ -0.36
DKC1-213ENST00000620277 IGHV1-8P0DP01 117 aa12.78□□□□□ -0.36
DKC1-213ENST00000620277 FCGR2BP31994 310 aaPredicted RBP12.78□□□□□ -0.36
DKC1-213ENST00000620277 HIGD1AQ9Y241 93 aa12.78□□□□□ -0.36
DKC1-213ENST00000620277 IGHV3OR16-13A0A075B7E8 117 aa12.78□□□□□ -0.36
DKC1-213ENST00000620277 IGHV3-74A0A0B4J1X5 117 aa12.78□□□□□ -0.36
DKC1-213ENST00000620277 THBDP07204 575 aa12.78□□□□□ -0.36
DKC1-213ENST00000620277 ZNF738Q8NE65 137 aa12.78□□□□□ -0.36
DKC1-213ENST00000620277 APOHP02749 345 aaPredicted RBP12.77□□□□□ -0.36
DKC1-213ENST00000620277 RASL11BQ9BPW5 248 aa12.77□□□□□ -0.36
DKC1-213ENST00000620277 TMEM133Q9H2Q1 129 aa12.77□□□□□ -0.36
DKC1-213ENST00000620277 SMKR1H3BMG3 65 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 SYS1-DBNDD2H3BUS1 97 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 TMEM186Q96B77 213 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 ABHD17AQ96GS6 310 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 C8orf49Q96NF6 230 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 FNDC10F2Z333 226 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 PRRG2O14669 202 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 ARF6P62330 175 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 LOXL1Q08397 574 aaPredicted RBP12.77□□□□□ -0.37
DKC1-213ENST00000620277 COX19Q49B96 90 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 GFRALQ6UXV0 394 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 PRSS3P2Q8NHM4 247 aa12.77□□□□□ -0.37
DKC1-213ENST00000620277 MRPL27Q9P0M9 148 aaKnown RBP12.77□□□□□ -0.37
DKC1-213ENST00000620277 NCR2O95944 276 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 IL4P05112 153 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 TEX36Q5VZQ5 186 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 C5orf17Q8NAS9 161 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 RPEQ96AT9 228 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 SLC25A39Q9BZJ4 359 aaPredicted RBP12.76□□□□□ -0.37
DKC1-213ENST00000620277 C7orf69Q9H7B7 122 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 COX11Q9Y6N1 276 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 HSBP1L1C9JCN9 74 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 KLRD1Q13241 179 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 TM4SF20Q53R12 229 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 OR4F17Q8NGA8 305 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 RNASE6Q93091 150 aaKnown RBP12.76□□□□□ -0.37
DKC1-213ENST00000620277 CREBBPQ92793 2442 aa12.76□□□□□ -0.37
DKC1-213ENST00000620277 GP9P14770 177 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 GAGE1Q13065 139 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 MRGPRG-AS1Q2M3A8 158 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 PPP1R27Q86WC6 154 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 SIGLEC9Q9Y336 463 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.75□□□□□ -0.37
DKC1-213ENST00000620277 TMEM213A2RRL7 107 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 RBPMS2Q6ZRY4 209 aaKnown RBP12.75□□□□□ -0.37
DKC1-213ENST00000620277 CBY1Q9Y3M2 126 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 IGHV2-26A0A0B4J1V2 119 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 SFTPCP11686 197 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 GRNP28799 593 aaKnown RBP12.75□□□□□ -0.37
DKC1-213ENST00000620277 PPIFP30405 207 aaKnown RBP12.75□□□□□ -0.37
DKC1-213ENST00000620277 FBLN7Q53RD9 439 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 Q8TAT8 98 aa12.75□□□□□ -0.37
DKC1-213ENST00000620277 HRNRQ86YZ3 2850 aaPredicted RBP12.74□□□□□ -0.37
DKC1-213ENST00000620277 IGHV3-66A0A0C4DH42 116 aa12.74□□□□□ -0.37
DKC1-213ENST00000620277 E7EQL1 145 aa12.74□□□□□ -0.37
DKC1-213ENST00000620277 FAM120AOSQ5T036 256 aa12.74□□□□□ -0.37
DKC1-213ENST00000620277 AMMECR1LQ6DCA0 310 aa12.74□□□□□ -0.37
DKC1-213ENST00000620277 FAM231DQ6ZW35 169 aa12.74□□□□□ -0.37
DKC1-213ENST00000620277 A0A1B0GXF2 115 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 FAM90A27PA6NNH2 459 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 TMEM75Q8N9X5 138 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 IGHV1-3A0A0C4DH29 117 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 IGHV1-69-2A0A0G2JMI3 117 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 MYCNOSP40205 109 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 IFI27P40305 119 aaPredicted RBP12.73□□□□□ -0.37
DKC1-213ENST00000620277 MEF2CQ06413 473 aaPredicted RBP12.73□□□□□ -0.37
DKC1-213ENST00000620277 PRSS57Q6UWY2 283 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 Q86TA4 180 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 FAM169BQ8N8A8 192 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 C8orf46Q8TAG6 207 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 FAM57AQ8TBR7 257 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 C18orf15Q96N68 181 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 MLST8Q9BVC4 326 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 MAP1LC3CQ9BXW4 147 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 IGHV3-49A0A0A0MS15 119 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 NCBP2LA6PVI3 153 aaKnown RBP12.73□□□□□ -0.37
DKC1-213ENST00000620277 HLA-DMBP28068 263 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 Q6ZS92 163 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 RAB37Q96AX2 223 aa12.73□□□□□ -0.37
DKC1-213ENST00000620277 IGKV2-40A0A087WW87 121 aaPredicted RBP12.72□□□□□ -0.37
DKC1-213ENST00000620277 TIMM23O14925 209 aa12.72□□□□□ -0.37
DKC1-213ENST00000620277 TOMM40O96008 361 aa12.72□□□□□ -0.37
DKC1-213ENST00000620277 IGKV2D-40P01614 121 aaPredicted RBP12.72□□□□□ -0.37
DKC1-213ENST00000620277 UBE2V1Q13404 147 aa12.72□□□□□ -0.37
DKC1-213ENST00000620277 SLC25A34Q6PIV7 304 aa12.72□□□□□ -0.37
DKC1-213ENST00000620277 THAP8Q8NA92 274 aa12.72□□□□□ -0.37
DKC1-213ENST00000620277 LTAP01374 205 aa12.72□□□□□ -0.37
DKC1-213ENST00000620277 LDLRAD2Q5SZI1 272 aa12.72□□□□□ -0.37
DKC1-213ENST00000620277 AMN1Q8IY45 258 aa12.72□□□□□ -0.37
DKC1-213ENST00000620277 LOC105371242A0A075B767 164 aa12.71□□□□□ -0.37
DKC1-213ENST00000620277 FA2HQ7L5A8 372 aa12.71□□□□□ -0.37
DKC1-213ENST00000620277 WIPF2Q8TF74 440 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms