RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 DEFB130BP0DP73 79 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 DEFB130AP0DP74 79 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 AZU1P20160 251 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 CNN1P51911 297 aaKnown RBP3.06□□□□□ -1.92
SNCA-213ENST00000618500 FXYD7P58549 80 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 ACOT6Q3I5F7 207 aaPredicted RBP3.06□□□□□ -1.92
SNCA-213ENST00000618500 CROCCP3Q8IVE0 287 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 FCGR1BQ92637 280 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 IL22RA2Q969J5 263 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 VGLL1Q99990 258 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 TMEM208Q9BTX3 173 aa3.06□□□□□ -1.92
SNCA-213ENST00000618500 RRP15Q9Y3B9 282 aaKnown RBP3.06□□□□□ -1.92
SNCA-213ENST00000618500 IGKV1D-37A0A075B6S9 117 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 TRAV8-2A0A0B4J237 113 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 ZNF324O75467 553 aaPredicted RBP3.05□□□□□ -1.92
SNCA-213ENST00000618500 UCP1P25874 307 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 HRH1P35367 487 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 LINC01556Q5JQF7 62 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 IBA57Q5T440 356 aaKnown RBP3.05□□□□□ -1.92
SNCA-213ENST00000618500 LYPD5Q6UWN5 251 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 OR4B1Q8NGF8 309 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 ZNF2Q9BSG1 426 aaPredicted RBP3.05□□□□□ -1.92
SNCA-213ENST00000618500 A0A075B6Q4 140 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 PIGBOS1A0A0B4J2F0 54 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 SPINK4O60575 86 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 NXPH3O95157 252 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 PSG1P11464 419 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 EVI2AP22794 236 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 CDKN1BP46527 198 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 RND2P52198 227 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 FXYD4P59646 89 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 OR2F1Q13607 317 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 GAMTQ14353 236 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 OR5H2Q8NGV7 314 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 ZFAND1Q8TCF1 268 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 TMEM37Q8WXS4 190 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 MRGPRFQ96AM1 343 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 MGLLQ99685 303 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 PYGO2Q9BRQ0 406 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 SLC25A32Q9H2D1 315 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 EHFQ9NZC4 300 aa3.05□□□□□ -1.92
SNCA-213ENST00000618500 RGS10O43665 173 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 ORM1P02763 201 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 ELK1P19419 428 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 TBPP20226 339 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 LEPP41159 167 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 PLP1P60201 277 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 MRPL23Q16540 153 aaKnown RBP3.04□□□□□ -1.92
SNCA-213ENST00000618500 GGNBP1Q5YKI7 109 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 LHFPL1Q86WI0 220 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 CCDC28AQ8IWP9 274 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 TMEM170AQ8WVE7 144 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 ST6GAL2Q96JF0 529 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 LINC00052Q96N35 136 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 FAM30AQ9NZY2 134 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 U3KQ87 197 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 J3QRK9 145 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 NMBP08949 121 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 RCVRNP35243 200 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 TAS2R20P59543 309 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 GABARAPL2P60520 117 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 SRSF3P84103 164 aaKnown RBP3.04□□□□□ -1.92
SNCA-213ENST00000618500 PXDC1Q5TGL8 231 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 TMED4Q7Z7H5 227 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 S100A7AQ86SG5 101 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 C11orf72Q8NBR9 251 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 OR8A1Q8NGG7 326 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 MRPL53Q96EL3 112 aaKnown RBP3.04□□□□□ -1.92
SNCA-213ENST00000618500 TM2D2Q9BX73 214 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 TMPRSS5Q9H3S3 457 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 NOP10Q9NPE3 64 aaKnown RBP3.04□□□□□ -1.92
SNCA-213ENST00000618500 IFT46Q9NQC8 304 aa3.04□□□□□ -1.92
SNCA-213ENST00000618500 H3BRN7 92 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 K7EPK0 472 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 IGHV3-48P01763 117 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 CRYBA4P53673 196 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 TMEM17Q86X19 198 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 SPARTQ8N0X7 666 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 ARRDC1Q8N5I2 433 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 CCDC71LQ8N9Z2 235 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 OR1S1Q8NH92 325 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 FAM19A4Q96LR4 140 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 LINC01587Q99440 93 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.03□□□□□ -1.92
SNCA-213ENST00000618500 PRO0255Q9UI72 69 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 SNURFLB1AK76 121 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 CIDEAO60543 219 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 SPINK13Q1W4C9 94 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 UBE2NLQ5JXB2 153 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 ACOT7LQ6ZUV0 252 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 CCDC190Q86UF4 302 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 CHAC1Q9BUX1 264 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 TRAV18A0A075B6X5 111 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 GABARAPH6UMI1 98 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 GABARAPO95166 117 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 TCL1AP56279 114 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 PSG3Q16557 428 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 SCXQ7RTU7 201 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 BAP18Q8IXM2 172 aa3.03□□□□□ -1.92
SNCA-213ENST00000618500 GPX8Q8TED1 209 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms