RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 RARRES2Q99969 163 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 SHANK2-AS3Q9BTD1 123 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 UQCC1Q9NVA1 299 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 FRAS1Q86XX4 4008 aa11.68□□□□□ -0.54
BRCA1-228ENST00000618469 ISLRO14498 428 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 SSNA1O43805 119 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 HLA-DRB4P13762 266 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 EWSR1Q01844 656 aaKnown RBP eCLIP11.67□□□□□ -0.54
BRCA1-228ENST00000618469 SAMD13Q5VXD3 122 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 C16orf92Q96LL3 132 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 GPR82Q96P67 336 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 RSG1Q9BU20 258 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 NMES1Q9C002 83 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 ARV1Q9H2C2 271 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 HLA-DRB4X5D2U9 266 aa11.67□□□□□ -0.54
BRCA1-228ENST00000618469 PLECQ15149 4684 aaKnown RBP11.66□□□□□ -0.54
BRCA1-228ENST00000618469 H3BMM0 161 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 GIG44P09565 113 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-228ENST00000618469 ATF4P18848 351 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-228ENST00000618469 CAMLGP49069 296 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 HBG1P69891 147 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 HBG2P69892 147 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 BAXQ07812 192 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 PMS2P11Q13670 270 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 TMEM41BQ5BJD5 291 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 GDF5OSQ5U4N7 250 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 S100A7AQ86SG5 101 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 CLEC5AQ9NY25 188 aa11.66□□□□□ -0.54
BRCA1-228ENST00000618469 COX7A2P2O60397 106 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 RPL7P18124 248 aaKnown RBP11.65□□□□□ -0.54
BRCA1-228ENST00000618469 S100A11P31949 105 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 H2BFSP57053 126 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 FGL1Q08830 312 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 VWC2Q2TAL6 325 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 PXDC1Q5TGL8 231 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 PATE2Q6UY27 113 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 FOXI2Q6ZQN5 318 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 C17orf77Q96MU5 243 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 SAV1Q9H4B6 383 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-228ENST00000618469 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 WDR83OSQ9Y284 106 aa11.65□□□□□ -0.54
BRCA1-228ENST00000618469 CXorf65A6NEN9 183 aa11.64□□□□□ -0.55
BRCA1-228ENST00000618469 IGKV3-20P01619 116 aa11.64□□□□□ -0.55
BRCA1-228ENST00000618469 RLN2P04090 185 aa11.64□□□□□ -0.55
BRCA1-228ENST00000618469 NUTF2P61970 127 aaKnown RBP11.64□□□□□ -0.55
BRCA1-228ENST00000618469 RAB31Q13636 194 aa11.64□□□□□ -0.55
BRCA1-228ENST00000618469 C20orf173Q96LM9 149 aa11.64□□□□□ -0.55
BRCA1-228ENST00000618469 C11orf68Q9H3H3 251 aaKnown RBP11.64□□□□□ -0.55
BRCA1-228ENST00000618469 RPRMQ9NS64 109 aa11.64□□□□□ -0.55
BRCA1-228ENST00000618469 E5RGE8 158 aa11.63□□□□□ -0.55
BRCA1-228ENST00000618469 F6UB75 175 aa11.63□□□□□ -0.55
BRCA1-228ENST00000618469 DEFB4AO15263 64 aa11.63□□□□□ -0.55
BRCA1-228ENST00000618469 PTTG1O95997 202 aa11.63□□□□□ -0.55
BRCA1-228ENST00000618469 FGF7P21781 194 aa11.63□□□□□ -0.55
BRCA1-228ENST00000618469 CYCSP99999 105 aaKnown RBP11.63□□□□□ -0.55
BRCA1-228ENST00000618469 MIC13Q5XKP0 118 aa11.63□□□□□ -0.55
BRCA1-228ENST00000618469 LINC00305Q7Z4B0 112 aa11.63□□□□□ -0.55
BRCA1-228ENST00000618469 PPP1R1CQ8WVI7 109 aa11.63□□□□□ -0.55
BRCA1-228ENST00000618469 XCL2Q9UBD3 114 aa11.63□□□□□ -0.55
BRCA1-228ENST00000618469 H0YIZ8 118 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 OPCMLQ14982 345 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 C10orf113Q5VZT2 155 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 IGFL4Q6B9Z1 124 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 OR4B1Q8NGF8 309 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 C1QTNF4Q9BXJ3 329 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 SLC25A31Q9H0C2 315 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 RNF24Q9Y225 148 aa11.62□□□□□ -0.55
BRCA1-228ENST00000618469 A0A087X0K7 114 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 TRAV8-2A0A0B4J237 113 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 LY6G6CO95867 125 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 PET100P0DJ07 73 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 FXYD7P58549 80 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 B2MP61769 119 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 PRR20EP86478 221 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 PRR20CP86479 221 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 PRR20DP86480 221 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 PRR20BP86481 221 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 PRR20AP86496 221 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 NHLH2Q02577 135 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 ATP6V1FQ16864 119 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 MORN5Q5VZ52 161 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 Q6ZRG5 221 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 Q8NAQ8 132 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 OR5C1Q8NGR4 320 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 THAP6Q8TBB0 222 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 TMEM37Q8WXS4 190 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 ALG5Q9Y673 324 aa11.61□□□□□ -0.55
BRCA1-228ENST00000618469 ELOA3CA0A087WX78 387 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-228ENST00000618469 IGHV4-28A0A0C4DH34 117 aa11.6□□□□□ -0.55
BRCA1-228ENST00000618469 A0A0J9YX75 114 aa11.6□□□□□ -0.55
BRCA1-228ENST00000618469 ZNF705EA8MWA4 302 aaPredicted RBP11.6□□□□□ -0.55
BRCA1-228ENST00000618469 CLINT1Q14677 625 aa11.6□□□□□ -0.55
BRCA1-228ENST00000618469 FAM78BQ5VT40 261 aa11.6□□□□□ -0.55
BRCA1-228ENST00000618469 SPATA31B1PQ5VZV4 182 aa11.6□□□□□ -0.55
BRCA1-228ENST00000618469 CSNK1G2-AS1Q8NCQ2 148 aa11.6□□□□□ -0.55
BRCA1-228ENST00000618469 ZNF738Q8NE65 137 aa11.6□□□□□ -0.55
BRCA1-228ENST00000618469 OR1L4Q8NGR5 311 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms