RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 ORAOV1Q8WV07 137 aa12.72□□□□□ -0.37
SNAP47-213ENST00000617596 IGLV11-55A0A075B6I3 123 aa12.71□□□□□ -0.37
SNAP47-213ENST00000617596 CTXND1A0A1B0GTU2 59 aa12.71□□□□□ -0.37
SNAP47-213ENST00000617596 CD69Q07108 199 aa12.71□□□□□ -0.37
SNAP47-213ENST00000617596 PVRIGQ6DKI7 326 aa12.71□□□□□ -0.37
SNAP47-213ENST00000617596 OR4B1Q8NGF8 309 aa12.71□□□□□ -0.37
SNAP47-213ENST00000617596 WDR61Q9GZS3 305 aaKnown RBP12.71□□□□□ -0.37
SNAP47-213ENST00000617596 ZNF705FA8MVS1 300 aaPredicted RBP12.7□□□□□ -0.38
SNAP47-213ENST00000617596 K7EP13 123 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 ZNF705DP0CH99 300 aaPredicted RBP12.7□□□□□ -0.38
SNAP47-213ENST00000617596 ZNF705BP0CI00 300 aaPredicted RBP12.7□□□□□ -0.38
SNAP47-213ENST00000617596 ATP5IP56385 69 aaPredicted RBP12.7□□□□□ -0.38
SNAP47-213ENST00000617596 DMRTA1Q5VZB9 504 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 TMEM147Q9BVK8 224 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 SLC39A9Q9NUM3 307 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 TRAPPC1Q9Y5R8 145 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 NDUFB8O95169 186 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 IGHV3-23P01764 117 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 RNASE1P07998 156 aaKnown RBP12.7□□□□□ -0.38
SNAP47-213ENST00000617596 PPIFP30405 207 aaKnown RBP12.7□□□□□ -0.38
SNAP47-213ENST00000617596 CDKN1BP46527 198 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 CRIP2P52943 208 aaPredicted RBP12.7□□□□□ -0.38
SNAP47-213ENST00000617596 TREML4Q6UXN2 200 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 Q6ZSV7 163 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 SSX7Q7RTT5 188 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 OR2D3Q8NGH3 330 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 CMTM2Q8TAZ6 248 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 RSG1Q9BU20 258 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 VAMP8Q9BV40 100 aa12.7□□□□□ -0.38
SNAP47-213ENST00000617596 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.38
SNAP47-213ENST00000617596 I3L2K1 104 aa12.69□□□□□ -0.38
SNAP47-213ENST00000617596 K7EIM0 57 aa12.69□□□□□ -0.38
SNAP47-213ENST00000617596 ELOVL1Q9BW60 279 aa12.69□□□□□ -0.38
SNAP47-213ENST00000617596 IGKV1OR2-108A0A075B7D4 117 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 OR5I1Q13606 314 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 ATP6V1FQ16864 119 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 VWC2Q2TAL6 325 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 NECAP1Q8NC96 275 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 NPIPB3Q92617 1050 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 SLC35E1Q96K37 410 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 TXNDC17Q9BRA2 123 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 KLK15Q9H2R5 256 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 VSIRQ9H7M9 311 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 FBXL7Q9UJT9 491 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
SNAP47-213ENST00000617596 RBX1P62877 108 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 RHOGP84095 191 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 DNAJC4Q9NNZ3 241 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 SERTAD4Q9NUC0 356 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 SLC45A2Q9UMX9 530 aa12.68□□□□□ -0.38
SNAP47-213ENST00000617596 PDE6DO43924 150 aa12.67□□□□□ -0.38
SNAP47-213ENST00000617596 CFHR3Q02985 330 aa12.67□□□□□ -0.38
SNAP47-213ENST00000617596 LEMD1Q68G75 181 aa12.67□□□□□ -0.38
SNAP47-213ENST00000617596 TOMM20LQ6UXN7 152 aa12.67□□□□□ -0.38
SNAP47-213ENST00000617596 RPUSD4Q96CM3 377 aaKnown RBP12.67□□□□□ -0.38
SNAP47-213ENST00000617596 NPVFQ9HCQ7 196 aa12.67□□□□□ -0.38
SNAP47-213ENST00000617596 CORTO00230 105 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 PF4V1P10720 104 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 Q0VG73 95 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 C15orf32Q32M92 178 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 Q8N2B8 174 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 RPP25LQ8N5L8 163 aaKnown RBP12.66□□□□□ -0.38
SNAP47-213ENST00000617596 OR1L6Q8NGR2 347 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 CACNG8Q8WXS5 425 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 TRBV9A0A0B4J1U6 114 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 C20orf202A1L168 122 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 TCF21O43680 179 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 TOMM40O96008 361 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 TRGV3P03979 118 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 HIST2H2BDQ6DRA6 164 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 ACSM6Q6P461 480 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 RNF2Q99496 336 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 MGST2Q99735 147 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 WDR83OSQ9Y284 106 aa12.66□□□□□ -0.38
SNAP47-213ENST00000617596 F6UZH7 168 aa12.65□□□□□ -0.38
SNAP47-213ENST00000617596 RPS20P60866 119 aaKnown RBP12.65□□□□□ -0.38
SNAP47-213ENST00000617596 Q6ZWC4 215 aa12.65□□□□□ -0.38
SNAP47-213ENST00000617596 TMEM256Q8N2U0 113 aa12.65□□□□□ -0.38
SNAP47-213ENST00000617596 NPCDR1Q9BY65 106 aa12.65□□□□□ -0.38
SNAP47-213ENST00000617596 LSM4Q9Y4Z0 139 aaKnown RBP12.65□□□□□ -0.38
SNAP47-213ENST00000617596 ZNF320A2RRD8 509 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 IGLV1-40P01703 118 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 GATA2P23769 480 aaPredicted RBP12.64□□□□□ -0.39
SNAP47-213ENST00000617596 ETFRF1Q6IPR1 90 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 TEPPQ6URK8 271 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 LINC01551Q86U37 167 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 JMJD8Q96S16 334 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 THYN1Q9P016 225 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 UQCR10Q9UDW1 63 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 SETD2Q9BYW2 2564 aaPredicted RBP12.64□□□□□ -0.39
SNAP47-213ENST00000617596 JMJD1CQ15652 2540 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 CTRLP40313 264 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 ZNF90Q03938 601 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 FAM78BQ5VT40 261 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 OR5AU1Q8NGC0 362 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 OR4F5Q8NH21 305 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 OR4F4Q96R69 305 aa12.64□□□□□ -0.39
SNAP47-213ENST00000617596 IGKV1D-37A0A075B6S9 117 aa12.63□□□□□ -0.39
SNAP47-213ENST00000617596 PSMB11A5LHX3 300 aa12.63□□□□□ -0.39
SNAP47-213ENST00000617596 F8W735 103 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms