RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 AMN1Q8IY45 258 aa8.35□□□□□ -1.07
CUL4A-212ENST00000617546 UBE2WQ96B02 151 aa8.35□□□□□ -1.07
CUL4A-212ENST00000617546 PLA2G2EQ9NZK7 142 aa8.35□□□□□ -1.07
CUL4A-212ENST00000617546 DOCK6Q96HP0 2047 aa8.35□□□□□ -1.07
CUL4A-212ENST00000617546 NLRC5Q86WI3 1866 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 CCL3L1P16619 93 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 LINC01545Q5VT33 79 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 THAP8Q8NA92 274 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 INAFM2P0DMQ5 153 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 UCNP55089 124 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 NDUFA4L2Q9NRX3 87 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 PTPRDP23468 1912 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 CD28P10747 220 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 UTF1Q5T230 341 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 MYOD1P15172 320 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 C3orf36Q3SXR2 165 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 DUX5Q96PT3 197 aa8.34□□□□□ -1.07
CUL4A-212ENST00000617546 TRPM7Q96QT4 1865 aa8.34□□□□□ -1.08
CUL4A-212ENST00000617546 IGHV1-46P01743 117 aa8.34□□□□□ -1.08
CUL4A-212ENST00000617546 C9orf106Q8NAJ2 232 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 SPTBP11277 2137 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 K7EN84 100 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 NDUFB8O95169 186 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 GAGE5Q13069 117 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 GAGE6Q13070 117 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 FAM201AQ5SY85 155 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 CLEC19AQ6UXS0 136 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 RCHY1Q96PM5 261 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 SCRT2Q9NQ03 307 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 IGKV2-40A0A087WW87 121 aaPredicted RBP8.33□□□□□ -1.08
CUL4A-212ENST00000617546 IGKV2D-40P01614 121 aaPredicted RBP8.33□□□□□ -1.08
CUL4A-212ENST00000617546 SIGLEC15Q6ZMC9 328 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 ZNF747Q9BV97 191 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 HIGD1BQ9P298 99 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 C9JAW5 83 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 NTN3O00634 580 aaPredicted RBP8.33□□□□□ -1.08
CUL4A-212ENST00000617546 NUP37Q8NFH4 326 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 C1QTNF4Q9BXJ3 329 aa8.33□□□□□ -1.08
CUL4A-212ENST00000617546 LTAP01374 205 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 SLC25A16P16260 332 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 UNQ6494/PRO21346Q6UXR6 183 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 TRAV40A0A0B4J280 105 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 IGHV1-8P0DP01 117 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 ETDBQ3ZM63 59 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 MINOS1Q5TGZ0 78 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 MINOS1-NBL1R4GNA1 71 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 SFTA2Q6UW10 78 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 RASL10AQ92737 203 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 GAFA1Q96PS6 74 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 GAGE12JA6NER3 117 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 NKX2-8O15522 239 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 GAGE7O76087 117 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 CD7P09564 240 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 GAGE12FP0CL80 117 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 GAGE12GP0CL81 117 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 GAGE12IP0CL82 117 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 CEACAM8P31997 349 aaPredicted RBP8.32□□□□□ -1.08
CUL4A-212ENST00000617546 GAGE4Q13068 117 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 C9orf153Q5TBE3 101 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 RNASE8Q8TDE3 154 aaKnown RBP8.32□□□□□ -1.08
CUL4A-212ENST00000617546 PIMREGQ9BSJ6 248 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 F5P12259 2224 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 TRBV19A0A075B6N1 114 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 TRBV7-1A0A0A6YYK4 115 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 IGHV1-3A0A0C4DH29 117 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 K7EM74 188 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 HLA-DRB4P13762 266 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 SIGLEC8Q9NYZ4 499 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 SIGLEC9Q9Y336 463 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 HLA-DRB4X5D2U9 266 aa8.32□□□□□ -1.08
CUL4A-212ENST00000617546 IGKV1D-17A0A075B6S4 117 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 FCN3O75636 299 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 MRPL51Q4U2R6 128 aaKnown RBP8.31□□□□□ -1.08
CUL4A-212ENST00000617546 ABHD17AQ96GS6 310 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 DNAJC30Q96LL9 226 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 MYOFQ9NZM1 2061 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 CCL21O00585 134 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 HLA-DMBP28068 263 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 TMEM200BQ69YZ2 307 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 ZNF833PQ6ZTB9 187 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 CLEC2AQ6UVW9 174 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 FREM3P0C091 2139 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 PINLYPA6NC86 204 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 IGHV3-23P01764 117 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 IGLC1P0CG04 106 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 LINC00479Q96M42 142 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 C11orf1Q9H5F2 150 aa8.31□□□□□ -1.08
CUL4A-212ENST00000617546 LSM4Q9Y4Z0 139 aaKnown RBP8.31□□□□□ -1.08
CUL4A-212ENST00000617546 LINC00311Q8N616 119 aa8.3□□□□□ -1.08
CUL4A-212ENST00000617546 FNDC1Q4ZHG4 1894 aaPredicted RBP8.3□□□□□ -1.08
CUL4A-212ENST00000617546 F8VRH5 84 aa8.3□□□□□ -1.08
CUL4A-212ENST00000617546 C12orf74Q32Q52 190 aa8.3□□□□□ -1.08
CUL4A-212ENST00000617546 ZNF474Q6S9Z5 364 aaPredicted RBP8.3□□□□□ -1.08
CUL4A-212ENST00000617546 ACYP1P07311 99 aa8.3□□□□□ -1.08
CUL4A-212ENST00000617546 BSPH1Q075Z2 132 aa8.3□□□□□ -1.08
CUL4A-212ENST00000617546 ATP6V0E2Q8NHE4 81 aa8.3□□□□□ -1.08
CUL4A-212ENST00000617546 NPFFR1Q9GZQ6 430 aa8.3□□□□□ -1.08
CUL4A-212ENST00000617546 SPRR3Q9UBC9 169 aa8.3□□□□□ -1.08
CUL4A-212ENST00000617546 GON4LQ3T8J9 2241 aa8.3□□□□□ -1.08
CUL4A-212ENST00000617546 FXYD5Q96DB9 178 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms