RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 TRAV12-3A0A0B4J271 114 aa15.05■□□□□ -0
AC008878.3-201ENST00000617428 TSKUQ8WUA8 353 aa15.05■□□□□ -0
AC008878.3-201ENST00000617428 RNF114Q9Y508 228 aa15.05■□□□□ -0
AC008878.3-201ENST00000617428 ZNF138P52744 262 aa15.04■□□□□ -0
AC008878.3-201ENST00000617428 SRSF1Q07955 248 aaKnown RBP eCLIP15.04■□□□□ -0
AC008878.3-201ENST00000617428 Q6ZS49 121 aa15.04■□□□□ -0
AC008878.3-201ENST00000617428 NUDT10Q8NFP7 164 aa15.04■□□□□ -0
AC008878.3-201ENST00000617428 UBE2E2Q96LR5 201 aa15.04■□□□□ -0
AC008878.3-201ENST00000617428 PEF1Q9UBV8 284 aaKnown RBP15.04■□□□□ -0
AC008878.3-201ENST00000617428 A0A087WX48 190 aa15.04■□□□□ -0
AC008878.3-201ENST00000617428 TCRAP04437 139 aa15.04■□□□□ -0
AC008878.3-201ENST00000617428 Q71RC1 249 aaPredicted RBP15.04■□□□□ -0
AC008878.3-201ENST00000617428 RCHY1Q96PM5 261 aa15.04■□□□□ -0
AC008878.3-201ENST00000617428 PRDM13Q9H4Q3 707 aa15.04■□□□□ -0
AC008878.3-201ENST00000617428 PLXNA3P51805 1871 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 TRGV1A0A0A0MS02 117 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 IGHV3-73A0A0B4J1V6 119 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 RNASE2P10153 161 aaKnown RBP15.03■□□□□ -0
AC008878.3-201ENST00000617428 CTAG1AP78358 180 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 OR9G4Q8NGQ1 327 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 C15orf62A8K5M9 175 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 APOMO95445 188 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 CRPP02741 224 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 CR1LQ2VPA4 569 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 ZNF562Q6V9R5 426 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 NXT2Q9NPJ8 142 aaKnown RBP15.03■□□□□ -0
AC008878.3-201ENST00000617428 NRN1Q9NPD7 142 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 ZNF503-AS2A6NEH8 195 aa15.03■□□□□ -0
AC008878.3-201ENST00000617428 MRPL16Q9NX20 251 aaKnown RBP15.03■□□□□ -0
AC008878.3-201ENST00000617428 MGAMO43451 1857 aa15.02■□□□□ -0
AC008878.3-201ENST00000617428 IGKV1-6A0A0C4DH72 117 aa15.02■□□□□ -0
AC008878.3-201ENST00000617428 ADMP35318 185 aa15.02■□□□□ -0
AC008878.3-201ENST00000617428 DUX4L9Q6RFH8 374 aaPredicted RBP15.02■□□□□ -0
AC008878.3-201ENST00000617428 SIP14410 1827 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 TRAV8-1A0A0A6YYK1 113 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 IGHV1-69DA0A0B4J2H0 117 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 A0A1W2PPI3 338 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 IGHV1-69P01742 117 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 WT1P19544 449 aaPredicted RBP15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 GATA4P43694 442 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 IGHV3-53P01767 116 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 HBDP02042 147 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 LINC00614P0C842 121 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 SMIM13P0DJ93 91 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 TCF15Q12870 199 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 LCN12Q6JVE5 192 aa15.02□□□□□ -0.01
AC008878.3-201ENST00000617428 TRBV7-9A0A0J9YWB2 115 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 FAM223BA6NKX1 122 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 CD28P10747 220 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 FAM223AQ8IWN6 122 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 BEND2Q8NDZ0 799 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 CYTL1Q9NRR1 136 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 DTX2Q86UW9 622 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 DERL1Q9BUN8 251 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 DAZ1Q9NQZ3 744 aaKnown RBP15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 ANKHD1Q8IWZ3 2542 aaKnown RBP15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 ATP6V0E1O15342 81 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 DEFB104AQ8WTQ1 72 aa15.01□□□□□ -0.01
AC008878.3-201ENST00000617428 LMO1P25800 156 aa15□□□□□ -0.01
AC008878.3-201ENST00000617428 ORMDL2Q53FV1 153 aa15□□□□□ -0.01
AC008878.3-201ENST00000617428 PRR31Q5SQ13 230 aa15□□□□□ -0.01
AC008878.3-201ENST00000617428 RNF166Q96A37 237 aaPredicted RBP15□□□□□ -0.01
AC008878.3-201ENST00000617428 Q8TCH9 128 aa15□□□□□ -0.01
AC008878.3-201ENST00000617428 TMEM170AQ8WVE7 144 aa15□□□□□ -0.01
AC008878.3-201ENST00000617428 VGLL1Q99990 258 aa14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 G3V318 75 aa14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 LOXP28300 417 aaPredicted RBP14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 ZNF876PQ49A33 203 aa14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 PRADC1Q9BSG0 188 aa14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 A0A0U1RRA0 63 aa14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 K7EM74 188 aa14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 NCR2O95944 276 aa14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 TMEM249Q2WGJ8 235 aa14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 LINC00477Q96M19 166 aa14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 RSPO3Q9BXY4 272 aaPredicted RBP14.99□□□□□ -0.01
AC008878.3-201ENST00000617428 ADARB2-AS1A8MUL3 147 aa14.98□□□□□ -0.01
AC008878.3-201ENST00000617428 UBE2DNLQ8IWF7 75 aa14.98□□□□□ -0.01
AC008878.3-201ENST00000617428 ITGB1BP1O14713 200 aa14.98□□□□□ -0.01
AC008878.3-201ENST00000617428 WDR86Q86TI4 376 aa14.98□□□□□ -0.01
AC008878.3-201ENST00000617428 IGLV3-9A0A075B6K5 115 aa14.98□□□□□ -0.01
AC008878.3-201ENST00000617428 IGHV2-70DA0A0C4DH43 119 aa14.98□□□□□ -0.01
AC008878.3-201ENST00000617428 DEFB131AP59861 70 aa14.98□□□□□ -0.01
AC008878.3-201ENST00000617428 DMRT1Q9Y5R6 373 aa14.98□□□□□ -0.01
AC008878.3-201ENST00000617428 TECTAO75443 2155 aa14.98□□□□□ -0.01
AC008878.3-201ENST00000617428 TRAV1-1A0A0B4J248 108 aa14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 TOMM40O96008 361 aa14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 LINC00518Q8N0U6 118 aa14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 C1QTNF4Q9BXJ3 329 aa14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 LYZL1Q6UWQ5 148 aa14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 MED13Q9UHV7 2174 aa14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 RPL36AP83881 106 aaKnown RBP14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 RPL36ALQ969Q0 106 aaKnown RBP14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 PTPRDP23468 1912 aa14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 CFHR2P36980 270 aa14.97□□□□□ -0.01
AC008878.3-201ENST00000617428 IGLV1-44P01699 117 aa14.96□□□□□ -0.01
AC008878.3-201ENST00000617428 LINC01551Q86U37 167 aa14.96□□□□□ -0.01
AC008878.3-201ENST00000617428 GNB1LQ9BYB4 327 aa14.96□□□□□ -0.01
AC008878.3-201ENST00000617428 NCOR2Q9Y618 2525 aa14.96□□□□□ -0.02
AC008878.3-201ENST00000617428 NDUFS7O75251 213 aa14.95□□□□□ -0.02
AC008878.3-201ENST00000617428 NDUFB8O95169 186 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms