RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 SLC25A22Q9H936 323 aa13.22□□□□□ -0.29
TRAPPC3-209ENST00000616395 RFNGQ9Y644 331 aa13.22□□□□□ -0.29
TRAPPC3-209ENST00000616395 IGLV11-55A0A075B6I3 123 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 A0A1B0GV50 99 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 H3BUA1 57 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 I3L2K1 104 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 CLN5O75503 358 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 LINC00869P0C866 280 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 CD81P60033 236 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 MLANAQ16655 118 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 KHDC3LQ587J8 217 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 TOR2AQ5JU69 321 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 CEMP1Q6PRD7 247 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 VSIRQ9H7M9 311 aa13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 TECRQ9NZ01 308 aaKnown RBP13.21□□□□□ -0.29
TRAPPC3-209ENST00000616395 TRGV3P03979 118 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 MFAP2P55001 183 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 KLF5Q13887 457 aaPredicted RBP13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 Q56UQ5 140 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 C19orf35Q6ZS72 473 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 DEFB125Q8N687 156 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 NECAP1Q8NC96 275 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 STXBP6Q8NFX7 210 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 SUN5Q8TC36 379 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 ATP6V0BQ99437 205 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 TXNDC17Q9BRA2 123 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 DNAJC4Q9NNZ3 241 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 C21orf62Q9NYP8 219 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 GNG13Q9P2W3 67 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 FBXL7Q9UJT9 491 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 FUT9Q9Y231 359 aa13.2□□□□□ -0.3
TRAPPC3-209ENST00000616395 TMEM218A2RU14 115 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 FAM223BA6NKX1 122 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 F8W036 122 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 SYNJ2BPP57105 145 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 FAM209BQ5JX69 171 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 FAM78BQ5VT40 261 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 C10orf113Q5VZT2 155 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 SPSB3Q6PJ21 355 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 PQLC2Q6ZP29 291 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 FAM223AQ8IWN6 122 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 WFDC10AQ9H1F0 79 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 TMEM167BQ9NRX6 74 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 VAX2Q9UIW0 290 aa13.19□□□□□ -0.3
TRAPPC3-209ENST00000616395 NDUFS6O75380 124 aaKnown RBP13.18□□□□□ -0.3
TRAPPC3-209ENST00000616395 YIF1AO95070 293 aa13.18□□□□□ -0.3
TRAPPC3-209ENST00000616395 CD5P06127 495 aa13.18□□□□□ -0.3
TRAPPC3-209ENST00000616395 CSN3P07498 182 aa13.18□□□□□ -0.3
TRAPPC3-209ENST00000616395 ZNF506Q5JVG8 444 aa13.18□□□□□ -0.3
TRAPPC3-209ENST00000616395 Q8WTZ3 238 aa13.18□□□□□ -0.3
TRAPPC3-209ENST00000616395 EEF1AKMT3Q96AZ1 226 aa13.18□□□□□ -0.3
TRAPPC3-209ENST00000616395 SEC11CQ9BY50 192 aa13.18□□□□□ -0.3
TRAPPC3-209ENST00000616395 SLC35B3Q9H1N7 401 aa13.18□□□□□ -0.3
TRAPPC3-209ENST00000616395 TRBV7-1A0A0A6YYK4 115 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 K7EIM0 57 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 NUPL2O15504 423 aaKnown RBP13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 HYPMO75409 117 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 OR2J3O76001 311 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 CD7P09564 240 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 OR5G3P0C626 314 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 RD3LP0DJH9 198 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 BCL2P10415 239 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 FCGR2BP31994 310 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 FGF8P55075 233 aaPredicted RBP13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 ZNF726P1Q15940 193 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 KLK9Q2XQG4 91 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 SRD5A3Q9H8P0 318 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 SIGLEC8Q9NYZ4 499 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 KLK9Q9UKQ9 250 aa13.17□□□□□ -0.3
TRAPPC3-209ENST00000616395 IGKV1OR2-108A0A075B7D4 117 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 IGHV3-21A0A0B4J1V1 117 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 IGHV3-48P01763 117 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 STAG3L2P0CL84 134 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 STAG3L3P0CL85 134 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 C8orf88P0DMB2 117 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 YPEL3P61236 119 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 ATP5G2Q06055 141 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 SVBPQ8N300 66 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 OR51G1Q8NGK1 321 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 FANCD2OSQ96PS1 177 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 OVOL2Q9BRP0 275 aa13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 KLK5Q9Y337 293 aaPredicted RBP13.16□□□□□ -0.3
TRAPPC3-209ENST00000616395 A0A0G2JLM5 398 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 TOMM40O96008 361 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 SFTA3P0C7M3 94 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 IGLC1P0CG04 106 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 PLP1P60201 277 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 RHOGP84095 191 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 LGALS9CQ6DKI2 356 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 CCDC28AQ8IWP9 274 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 OR1B1Q8NGR6 318 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 USMG5Q96IX5 58 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 TMEM231Q9H6L2 316 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 HIGD1AQ9Y241 93 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 ARL2-SNX15V9GYD0 113 aa13.15□□□□□ -0.3
TRAPPC3-209ENST00000616395 A0A0J9YWU9 116 aa13.14□□□□□ -0.31
TRAPPC3-209ENST00000616395 OR7C2O60412 319 aa13.14□□□□□ -0.31
TRAPPC3-209ENST00000616395 APOC3P02656 99 aa13.14□□□□□ -0.31
TRAPPC3-209ENST00000616395 ORM2P19652 201 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms