RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
CACNA1C-231ENST00000616390 TSPAN13O95857 204 aa11.08□□□□□ -0.63
CACNA1C-231ENST00000616390 PIMREGQ9BSJ6 248 aa11.08□□□□□ -0.63
CACNA1C-231ENST00000616390 CORTO00230 105 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 LINC00310P59036 64 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 UBE2G1P62253 170 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 CX3CL1P78423 397 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 IQCJQ1A5X6 159 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 KIR3DL3Q8N743 410 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 C8orf31Q8N9H6 132 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 TEX45Q8NA69 505 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 HSPB9Q9BQS6 159 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 OSTCQ9NRP0 149 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 ARL2-SNX15V9GYD0 113 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 HIVEP3Q5T1R4 2406 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 HES1Q14469 280 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 SSX8Q7RTT4 187 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 THAP8Q8NA92 274 aa11.08□□□□□ -0.64
CACNA1C-231ENST00000616390 TRAV30A0A087WSZ9 112 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 TIMM23O14925 209 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 MMDQ15546 238 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 COX19Q49B96 90 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 SRSF12Q8WXF0 261 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 TBX15Q96SF7 602 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 GNB4Q9HAV0 340 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 CDC42EP3Q9UKI2 254 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 INS-IGF2F8WCM5 200 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 SMAD7O15105 426 aaKnown RBP11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 HYPMO75409 117 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 SCGB2A1O75556 95 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 TOMM20LQ6UXN7 152 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 OR8B3Q8NGG8 313 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 PERPQ96FX8 193 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 OR8B2Q96RD0 313 aa11.07□□□□□ -0.64
CACNA1C-231ENST00000616390 FSTL3O95633 263 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 SRIP30626 198 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 CAMPP49913 170 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 TPPP2P59282 170 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 KLF17Q5JT82 389 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 Q6ZWC4 215 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 ASCL2Q99929 193 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 PMCHP20382 165 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 CDKN1AP38936 164 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 CA7P43166 264 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 TDRG1Q3Y452 100 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 ZNF562Q6V9R5 426 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 TMEM136Q6ZRR5 245 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 SSBP4Q9BWG4 385 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 WNT10AQ9GZT5 417 aa11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
CACNA1C-231ENST00000616390 ZNF253O75346 499 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 PSG1P11464 419 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 VN1R17PQ8TDU5 208 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 RCHY1Q96PM5 261 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 GNB1LQ9BYB4 327 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 CELSR1Q9NYQ6 3014 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 TEX22C9J3V5 150 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 M0QXV9 152 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 VPS13CQ709C8 3753 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 ZNF738Q8NE65 137 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 SS18L2Q9UHA2 77 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 EPDR1Q9UM22 224 aa11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 POLR3KQ9Y2Y1 108 aaPredicted RBP11.05□□□□□ -0.64
CACNA1C-231ENST00000616390 TRAV9-1A0A075B6T8 112 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 CRYGBP07316 175 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 GPR6P46095 362 aaPredicted RBP11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 F11RQ9Y624 299 aaKnown RBP11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 TRAV8-1A0A0A6YYK1 113 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 SMIM27A0A1W2PRY6 76 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 AMY1AP04745 511 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 KRTDAPP60985 99 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 CCDC144NLQ6NUI1 221 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 FAM19A2Q8N3H0 131 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 ADORA2A-AS1P86434 159 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 EXOC3-AS1Q8N2X6 119 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 SIGLECL1Q8N7X8 197 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 TMEM116Q8NCL8 245 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 TRGV9Q99603 122 aa11.04□□□□□ -0.64
CACNA1C-231ENST00000616390 OR11H12B2RN74 326 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 WIPF1O43516 503 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 APCSP02743 223 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 NTF3P20783 257 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 OR11H1Q8NG94 326 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 OR11H2Q8NH07 326 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 RASL11BQ9BPW5 248 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 Q9H3A6 140 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 RNF114Q9Y508 228 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 HTR1DP28221 377 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 AMTP48728 403 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 NUP35Q8NFH5 326 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 MIEN1Q9BRT3 115 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 HIGD1AQ9Y241 93 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 PAM16Q9Y3D7 125 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 COX11Q9Y6N1 276 aa11.03□□□□□ -0.64
CACNA1C-231ENST00000616390 IZUMO1RA6ND01 250 aa11.02□□□□□ -0.65
CACNA1C-231ENST00000616390 HIGD1CA8MV81 97 aa11.02□□□□□ -0.65
CACNA1C-231ENST00000616390 BMPR1BO00238 502 aa11.02□□□□□ -0.65
CACNA1C-231ENST00000616390 LINC00322Q6ZN03 302 aaPredicted RBP11.02□□□□□ -0.65
CACNA1C-231ENST00000616390 Q71RC1 249 aaPredicted RBP11.02□□□□□ -0.65
CACNA1C-231ENST00000616390 NCBP2LA6PVI3 153 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms