RNA–Protein interactions for RNA: ENST00000616271.4

CADM1-222, Transcript of cell adhesion molecule 1, human

TSL 5 BASIC

Gene CADM1, Length 1,246 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CADM1-222	ENST00000616271	SAMD13	Q5VXD3	122 aa		13.61	□□□□□ -0.23
CADM1-222	ENST00000616271	LEMD1	Q68G75	181 aa		13.61	□□□□□ -0.23
CADM1-222	ENST00000616271	OR1L4	Q8NGR5	311 aa		13.61	□□□□□ -0.23
CADM1-222	ENST00000616271	PFDN5	Q99471	154 aa		13.61	□□□□□ -0.23
CADM1-222	ENST00000616271	SPATA25	Q9BR10	227 aa		13.61	□□□□□ -0.23
CADM1-222	ENST00000616271	WDR61	Q9GZS3	305 aa	Known RBP	13.61	□□□□□ -0.23
CADM1-222	ENST00000616271	SLC39A9	Q9NUM3	307 aa		13.61	□□□□□ -0.23
CADM1-222	ENST00000616271	PXMP4	Q9Y6I8	212 aa		13.61	□□□□□ -0.23
CADM1-222	ENST00000616271		U3KQK5	164 aa		13.61	□□□□□ -0.23
CADM1-222	ENST00000616271	RPL7	P18124	248 aa	Known RBP	13.6	□□□□□ -0.23
CADM1-222	ENST00000616271	APOC4	P55056	127 aa		13.6	□□□□□ -0.23
CADM1-222	ENST00000616271	C10orf113	Q5VZT2	155 aa		13.6	□□□□□ -0.23
CADM1-222	ENST00000616271	LINC00305	Q7Z4B0	112 aa		13.6	□□□□□ -0.23
CADM1-222	ENST00000616271	TMEM37	Q8WXS4	190 aa		13.6	□□□□□ -0.23
CADM1-222	ENST00000616271	KCNIP2	Q9NS61	270 aa		13.6	□□□□□ -0.23
CADM1-222	ENST00000616271	KIR2DL5B	A0A0G2JN68	375 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	KIR2DL5B	A0A0G2JPC4	375 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	SOCS3	O14543	225 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	ID1	P41134	155 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	PSMB3	P49720	205 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	PSMG4	Q5JS54	123 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	KIR2DL5A	Q8N109	375 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	KIR2DL5B	Q8NHK3	375 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	RCHY1	Q96PM5	261 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	AQP10	Q96PS8	301 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	DNAJC4	Q9NNZ3	241 aa		13.59	□□□□□ -0.23
CADM1-222	ENST00000616271	IFNA5	P01569	189 aa		13.58	□□□□□ -0.24
CADM1-222	ENST00000616271	ATF4	P18848	351 aa	Predicted RBP	13.58	□□□□□ -0.24
CADM1-222	ENST00000616271		Q5BKY6	102 aa		13.58	□□□□□ -0.24
CADM1-222	ENST00000616271	ZNF709	Q8N972	641 aa		13.58	□□□□□ -0.24
CADM1-222	ENST00000616271	OR2T35	Q8NGX2	323 aa		13.58	□□□□□ -0.24
CADM1-222	ENST00000616271	RSG1	Q9BU20	258 aa		13.58	□□□□□ -0.24
CADM1-222	ENST00000616271	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.58	□□□□□ -0.24
CADM1-222	ENST00000616271	SMIM3	Q9BZL3	60 aa		13.58	□□□□□ -0.24
CADM1-222	ENST00000616271	C17orf112	F2Z3M2	114 aa		13.57	□□□□□ -0.24
CADM1-222	ENST00000616271	ISLR	O14498	428 aa		13.57	□□□□□ -0.24
CADM1-222	ENST00000616271	RPL35A	P18077	110 aa	Known RBP	13.57	□□□□□ -0.24
CADM1-222	ENST00000616271	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.57	□□□□□ -0.24
CADM1-222	ENST00000616271	GATAD1	Q8WUU5	269 aa		13.57	□□□□□ -0.24
CADM1-222	ENST00000616271		A0A087X0K7	114 aa		13.56	□□□□□ -0.24
CADM1-222	ENST00000616271	UBE2C	O00762	179 aa		13.56	□□□□□ -0.24
CADM1-222	ENST00000616271	MRPS12	O15235	138 aa	Known RBP	13.56	□□□□□ -0.24
CADM1-222	ENST00000616271	STH	Q8IWL8	128 aa		13.56	□□□□□ -0.24
CADM1-222	ENST00000616271	SCGB1C1	Q8TD33	95 aa		13.56	□□□□□ -0.24
CADM1-222	ENST00000616271	C17orf77	Q96MU5	243 aa		13.56	□□□□□ -0.24
CADM1-222	ENST00000616271	FXYD6-FXYD2	A0A087WZ82	144 aa		13.55	□□□□□ -0.24
CADM1-222	ENST00000616271	MORN5	Q5VZ52	161 aa		13.55	□□□□□ -0.24
CADM1-222	ENST00000616271	BPIFA4P	Q86YQ2	179 aa		13.55	□□□□□ -0.24
CADM1-222	ENST00000616271	C16orf92	Q96LL3	132 aa		13.55	□□□□□ -0.24
CADM1-222	ENST00000616271	WFDC1	Q9HC57	220 aa		13.55	□□□□□ -0.24
CADM1-222	ENST00000616271	KNCN	A6PVL3	124 aa		13.54	□□□□□ -0.24
CADM1-222	ENST00000616271		G3V3Q6	166 aa		13.54	□□□□□ -0.24
CADM1-222	ENST00000616271		Q6ZWC4	215 aa		13.54	□□□□□ -0.24
CADM1-222	ENST00000616271	TRPT1	Q86TN4	253 aa	Known RBP	13.54	□□□□□ -0.24
CADM1-222	ENST00000616271	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.54	□□□□□ -0.24
CADM1-222	ENST00000616271	RETN	Q9HD89	108 aa		13.54	□□□□□ -0.24
CADM1-222	ENST00000616271	TNFSF18	Q9UNG2	199 aa		13.54	□□□□□ -0.24
CADM1-222	ENST00000616271	CXCL2	P19875	107 aa		13.53	□□□□□ -0.24
CADM1-222	ENST00000616271	ZNF266	Q14584	549 aa		13.53	□□□□□ -0.24
CADM1-222	ENST00000616271	ACTL10	Q5JWF8	245 aa		13.53	□□□□□ -0.24
CADM1-222	ENST00000616271	LINC00052	Q96N35	136 aa		13.53	□□□□□ -0.24
CADM1-222	ENST00000616271	CSTL1	Q9H114	145 aa		13.53	□□□□□ -0.24
CADM1-222	ENST00000616271	TP53TG1	Q9Y2A0	90 aa		13.53	□□□□□ -0.24
CADM1-222	ENST00000616271	RNF222	A6NCQ9	220 aa		13.52	□□□□□ -0.25
CADM1-222	ENST00000616271	HLA-DRB4	P13762	266 aa		13.52	□□□□□ -0.25
CADM1-222	ENST00000616271	GCSAML	Q5JQS6	135 aa		13.52	□□□□□ -0.25
CADM1-222	ENST00000616271	LCN15	Q6UWW0	184 aa		13.52	□□□□□ -0.25
CADM1-222	ENST00000616271	RPRM	Q9NS64	109 aa		13.52	□□□□□ -0.25
CADM1-222	ENST00000616271	HLA-DRB4	X5D2U9	266 aa		13.52	□□□□□ -0.25
CADM1-222	ENST00000616271	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	TENM3	Q9P273	2699 aa		13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	SPP1	P10451	314 aa		13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	FAM78B	Q5VT40	261 aa		13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	MORN3	Q6PF18	240 aa	Predicted RBP	13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	FOXI2	Q6ZQN5	318 aa		13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	WWC2-AS2	Q96NR7	200 aa		13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	MRPL32	Q9BYC8	188 aa	Known RBP	13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	SAV1	Q9H4B6	383 aa	Predicted RBP	13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	TIMM9	Q9Y5J7	89 aa		13.51	□□□□□ -0.25
CADM1-222	ENST00000616271	TRAV8-2	A0A0B4J237	113 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	TRAV5	A0A0B4J249	113 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271		H3BMM0	161 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	IGLC2	P0DOY2	106 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	DEFB135	Q30KP9	77 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	FFAR4	Q5NUL3	377 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	SPATA31B1P	Q5VZV4	182 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	C20orf173	Q96LM9	149 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	OVOL2	Q9BRP0	275 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	SLC50A1	Q9BRV3	221 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	HRH4	Q9H3N8	390 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	TMEM14C	Q9P0S9	112 aa		13.5	□□□□□ -0.25
CADM1-222	ENST00000616271	CA1	P00915	261 aa	Predicted RBP	13.49	□□□□□ -0.25
CADM1-222	ENST00000616271	TMEM41B	Q5BJD5	291 aa		13.49	□□□□□ -0.25
CADM1-222	ENST00000616271		Q6ZNX1	250 aa		13.49	□□□□□ -0.25
CADM1-222	ENST00000616271	LRRC20	Q8TCA0	184 aa		13.49	□□□□□ -0.25
CADM1-222	ENST00000616271	RNF183	Q96D59	192 aa		13.49	□□□□□ -0.25
CADM1-222	ENST00000616271	SPRY2	O43597	315 aa		13.48	□□□□□ -0.25
CADM1-222	ENST00000616271	GUK1	Q16774	197 aa		13.48	□□□□□ -0.25
CADM1-222	ENST00000616271	GDF5OS	Q5U4N7	250 aa		13.48	□□□□□ -0.25
CADM1-222	ENST00000616271	EBLN2	Q6P2I7	272 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms