RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ZNF138P52744 262 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 UNQ6494/PRO21346Q6UXR6 183 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 MESP2Q0VG99 397 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 IGKV1-9A0A0C4DH69 117 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 C2CD4DB7Z1M9 353 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 MCRIP2Q9BUT9 160 aaKnown RBP11.39□□□□□ -0.59
CHD1-212ENST00000614616 TCTEX1D4Q5JR98 221 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 NCR2O95944 276 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 CD69Q07108 199 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 LYZL1Q6UWQ5 148 aa11.39□□□□□ -0.59
CHD1-212ENST00000614616 C5orf47Q569G3 176 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 TTTY12Q9BZ98 90 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 HGFACQ04756 655 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 KLRD1Q13241 179 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 PRO1854Q9UHT4 67 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 SAA2-SAA4A0A096LPE2 208 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 SAA2P0DJI9 122 aaPredicted RBP11.38□□□□□ -0.59
CHD1-212ENST00000614616 SRD5A1P18405 259 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 TRAV26-1A0A087WT03 109 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 IGKV1D-43A0A0B4J1Z2 117 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 TRAV40A0A0B4J280 105 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 FGF6P10767 208 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 DUTP33316 252 aaKnown RBP11.38□□□□□ -0.59
CHD1-212ENST00000614616 QRFPP83859 136 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 LIME1Q9H400 295 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 K7ERJ3 54 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 ACYP1P07311 99 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 TMEM42Q69YG0 159 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 FOXI2Q6ZQN5 318 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 AMN1Q8IY45 258 aa11.38□□□□□ -0.59
CHD1-212ENST00000614616 LOC102723996A0A087X1L8 192 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 LILRA6Q6PI73 481 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 RNF125Q96EQ8 232 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 MRPS18CQ9Y3D5 142 aaKnown RBP11.37□□□□□ -0.59
CHD1-212ENST00000614616 HAX1O00165 279 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 CCL8P80075 99 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 ZNRF1Q8ND25 227 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 LYZL4Q96KX0 146 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 CACNA1BQ00975 2339 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 NPIPB5A8MRT5 1133 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 ZNF329Q86UD4 541 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 SOCS3O14543 225 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 CD7P09564 240 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 FXYD7P58549 80 aa11.37□□□□□ -0.59
CHD1-212ENST00000614616 IGLV3-21P80748 117 aaPredicted RBP11.37□□□□□ -0.59
CHD1-212ENST00000614616 C15orf53Q8NAA6 179 aa11.36□□□□□ -0.59
CHD1-212ENST00000614616 TRGV9Q99603 122 aa11.36□□□□□ -0.59
CHD1-212ENST00000614616 C21orf62Q9NYP8 219 aa11.36□□□□□ -0.59
CHD1-212ENST00000614616 SIGLEC8Q9NYZ4 499 aa11.36□□□□□ -0.59
CHD1-212ENST00000614616 IGLC1P0CG04 106 aa11.36□□□□□ -0.59
CHD1-212ENST00000614616 ANKRD39Q53RE8 183 aa11.36□□□□□ -0.59
CHD1-212ENST00000614616 LYPD1Q8N2G4 141 aa11.36□□□□□ -0.59
CHD1-212ENST00000614616 V9GYV3 84 aa11.36□□□□□ -0.59
CHD1-212ENST00000614616 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.36□□□□□ -0.592e-9■■■■■ 47.6
CHD1-212ENST00000614616 MALP21145 153 aa11.36□□□□□ -0.59
CHD1-212ENST00000614616 FAM214BQ7L5A3 538 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 LAMTOR3Q9UHA4 124 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 SORL1Q92673 2214 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 SAP30O75446 220 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 VCYO14598 125 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 SPATA31B1PQ5VZV4 182 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 PLA2G2FQ9BZM2 168 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 EXOC3-AS1Q8N2X6 119 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 TMEM75Q8N9X5 138 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 IGHV1OR15-9A0A0B4J2B8 117 aa11.35□□□□□ -0.59
CHD1-212ENST00000614616 TRAV13-1A0A0B4J241 112 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 LYPD3O95274 346 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 TIMM21Q9BVV7 248 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 Q6ZS49 121 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 MALRD1Q5VYJ5 2156 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 PTPRZ1P23471 2315 aaPredicted RBP11.34□□□□□ -0.59
CHD1-212ENST00000614616 C12orf74Q32Q52 190 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 IQCF6A8MYZ5 107 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 PF4V1P10720 104 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 C16orf97H3BN30 126 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 HAPLN4Q86UW8 402 aa11.34□□□□□ -0.59
CHD1-212ENST00000614616 CPAMD8Q8IZJ3 1885 aa11.33□□□□□ -0.59
CHD1-212ENST00000614616 SH2D1AO60880 128 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 IGHV3-66A0A0C4DH42 116 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 RBM3P98179 157 aaKnown RBP11.33□□□□□ -0.6
CHD1-212ENST00000614616 KLF5Q13887 457 aaPredicted RBP11.33□□□□□ -0.6
CHD1-212ENST00000614616 TMEM92Q6UXU6 159 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 TCRAP04437 139 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 ZNF501Q96CX3 271 aaPredicted RBP11.33□□□□□ -0.6
CHD1-212ENST00000614616 DUX5Q96PT3 197 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 DUX3Q96PT4 197 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 SCRT2Q9NQ03 307 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 ATOX1O00244 68 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 RCHY1Q96PM5 261 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 UBL5Q9BZL1 73 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 PRR33A8MZF0 331 aa11.33□□□□□ -0.6
CHD1-212ENST00000614616 VDAC2P45880 294 aaPredicted RBP11.33□□□□□ -0.6
CHD1-212ENST00000614616 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.32□□□□□ -0.6
CHD1-212ENST00000614616 ZDBF2Q9HCK1 2354 aa11.32□□□□□ -0.6
CHD1-212ENST00000614616 NTF4P34130 210 aa11.32□□□□□ -0.6
CHD1-212ENST00000614616 LINC00312Q9Y6C7 94 aa11.32□□□□□ -0.6
CHD1-212ENST00000614616 IGHV3OR16-12A0A075B7B8 117 aa11.32□□□□□ -0.6
CHD1-212ENST00000614616 IGKV1-5P01602 117 aa11.32□□□□□ -0.6
CHD1-212ENST00000614616 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms