RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 LAMTOR1Q6IAA8 161 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 APRG1Q8IVJ8 170 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 GBGT1Q8N5D6 347 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 STXBP6Q8NFX7 210 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 MUC7Q8TAX7 377 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 DCANP1Q8TF63 244 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 TMEM37Q8WXS4 190 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 PPP1R14BQ96C90 147 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 C17orf77Q96MU5 243 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 OVOL2Q9BRP0 275 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 RSG1Q9BU20 258 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 SLC25A39Q9BZJ4 359 aaPredicted RBP6.4□□□□□ -1.38
SNCA-212ENST00000611107 ARV1Q9H2C2 271 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 SLC39A9Q9NUM3 307 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 HIGD1AQ9Y241 93 aa6.4□□□□□ -1.38
SNCA-212ENST00000611107 TRAV2A0A0B4J234 112 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 HELTA6NFD8 242 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 OR4C46A6NHA9 309 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 K7EQG2 157 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 ARPC5O15511 151 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 COX7A2P2O60397 106 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 CD5P06127 495 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 OR5G3P0C626 314 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 RAB31Q13636 194 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 GCSAMLQ5JQS6 135 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 C1orf194Q5T5A4 169 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 PXDC1Q5TGL8 231 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 PARD6GQ9BYG4 376 aaPredicted RBP6.39□□□□□ -1.39
SNCA-212ENST00000611107 ZMAT4Q9H898 229 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 SLC25A22Q9H936 323 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 MAP6D1Q9H9H5 199 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 RFNGQ9Y644 331 aa6.39□□□□□ -1.39
SNCA-212ENST00000611107 SOCS3O14543 225 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 MRPS12O15235 138 aaKnown RBP6.38□□□□□ -1.39
SNCA-212ENST00000611107 RPL35AP18077 110 aaKnown RBP6.38□□□□□ -1.39
SNCA-212ENST00000611107 AP2S1P53680 142 aaPredicted RBP6.38□□□□□ -1.39
SNCA-212ENST00000611107 RPL11P62913 178 aaKnown RBP6.38□□□□□ -1.39
SNCA-212ENST00000611107 CD300CQ08708 224 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 ZNF345Q14585 488 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 C10orf113Q5VZT2 155 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 LINC00305Q7Z4B0 112 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 TCTE3Q8IZS6 198 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 OR8I2Q8N0Y5 310 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 INO80EQ8NBZ0 244 aaPredicted RBP6.38□□□□□ -1.39
SNCA-212ENST00000611107 SPATA25Q9BR10 227 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 NRN1Q9NPD7 142 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 KCNIP2Q9NS61 270 aa6.38□□□□□ -1.39
SNCA-212ENST00000611107 ELOA3CA0A087WX78 387 aaPredicted RBP6.37□□□□□ -1.39
SNCA-212ENST00000611107 HMSDA8MTL9 139 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 IFNA5P01569 189 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 ZNF688P0C7X2 276 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 ZNF266Q14584 549 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 SPATA31B1PQ5VZV4 182 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 RPL7L1Q6DKI1 246 aaKnown RBP6.37□□□□□ -1.39
SNCA-212ENST00000611107 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 Q6ZRG5 221 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 HSD17B11Q8NBQ5 300 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 OR1L4Q8NGR5 311 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 PFDN5Q99471 154 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 MFFQ9GZY8 342 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 PFDN2Q9UHV9 154 aa6.37□□□□□ -1.39
SNCA-212ENST00000611107 A0A087X0K7 114 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 TRAV5A0A0B4J249 113 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 C17orf112F2Z3M2 114 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 C3orf84H3BNL1 204 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 DNASE2O00115 360 aaPredicted RBP6.36□□□□□ -1.39
SNCA-212ENST00000611107 GIG44P09565 113 aaPredicted RBP6.36□□□□□ -1.39
SNCA-212ENST00000611107 RPL7P18124 248 aaKnown RBP6.36□□□□□ -1.39
SNCA-212ENST00000611107 CXCL2P19875 107 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 ATP6V0CP27449 155 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 GALR1P47211 349 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 DEFB1P60022 68 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 PAFAH1B2P68402 229 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 FFAR4Q5NUL3 377 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 AKAP14Q86UN6 197 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 KCNRGQ8N5I3 272 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 ZNF709Q8N972 641 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 SCGB1C1Q8TD33 95 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 GATAD1Q8WUU5 269 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 GPR82Q96P67 336 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 PSMG3Q9BT73 122 aaPredicted RBP6.36□□□□□ -1.39
SNCA-212ENST00000611107 SH3BGRL3Q9H299 93 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 SEPSECSQ9HD40 501 aaKnown RBP6.36□□□□□ -1.39
SNCA-212ENST00000611107 DNAJC4Q9NNZ3 241 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 CYTL1Q9NRR1 136 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 TIMM9Q9Y5J7 89 aa6.36□□□□□ -1.39
SNCA-212ENST00000611107 LOC102724200A0A096LPH7 203 aaPredicted RBP6.35□□□□□ -1.39
SNCA-212ENST00000611107 TRAV8-2A0A0B4J237 113 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 SLC17A3O00476 420 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 C1QBP02746 253 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 IGLC2P0DOY2 106 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 ATF4P18848 351 aaPredicted RBP6.35□□□□□ -1.39
SNCA-212ENST00000611107 S100A7P31151 101 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 PSMB3P49720 205 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 DEFB131AP59861 70 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 RAB2AP61019 212 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 DEFB135Q30KP9 77 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 PSMG4Q5JS54 123 aa6.35□□□□□ -1.39
SNCA-212ENST00000611107 FAM78BQ5VT40 261 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms