RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 OR4D5Q8NGN0 318 aa9.47□□□□□ -0.89
POLR2J3-219ENST00000608621 OR1B1Q8NGR6 318 aa9.47□□□□□ -0.89
POLR2J3-219ENST00000608621 PKHD1P08F94 4074 aa9.47□□□□□ -0.89
POLR2J3-219ENST00000608621 DNAH11Q96DT5 4516 aa9.47□□□□□ -0.89
POLR2J3-219ENST00000608621 ZNF705GA8MUZ8 300 aaPredicted RBP9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 H3BMQ9 156 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 M0R2Z0 102 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 DUSP14O95147 198 aaKnown RBP9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 SFT2D2O95562 160 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 CNN1P51911 297 aaKnown RBP9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 FGL1Q08830 312 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 PPP1R1AQ13522 171 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 SPINK13Q1W4C9 94 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 OR11H7Q8NGC8 314 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 TRIM63Q969Q1 353 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 GPR82Q96P67 336 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 SLC25A21Q9BQT8 299 aaPredicted RBP9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 TMEM147Q9BVK8 224 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 NACAE9PAV3 2078 aa9.46□□□□□ -0.9
POLR2J3-219ENST00000608621 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
POLR2J3-219ENST00000608621 H3BP45 60 aa9.45□□□□□ -0.9
POLR2J3-219ENST00000608621 CRXO43186 299 aaPredicted RBP9.45□□□□□ -0.9
POLR2J3-219ENST00000608621 NOL3O60936 208 aaKnown RBP9.45□□□□□ -0.9
POLR2J3-219ENST00000608621 S100A7P31151 101 aa9.45□□□□□ -0.9
POLR2J3-219ENST00000608621 AKR1C1Q04828 323 aa9.45□□□□□ -0.9
POLR2J3-219ENST00000608621 RNF182Q8N6D2 247 aa9.45□□□□□ -0.9
POLR2J3-219ENST00000608621 STRAPQ9Y3F4 350 aaKnown RBP9.45□□□□□ -0.9
POLR2J3-219ENST00000608621 LYRM9A8MSI8 78 aa9.44□□□□□ -0.9
POLR2J3-219ENST00000608621 SOHLH1Q5JUK2 328 aa9.44□□□□□ -0.9
POLR2J3-219ENST00000608621 C1orf134Q5TEV5 83 aa9.44□□□□□ -0.9
POLR2J3-219ENST00000608621 TMEM144Q7Z5S9 345 aa9.44□□□□□ -0.9
POLR2J3-219ENST00000608621 C15orf53Q8NAA6 179 aa9.44□□□□□ -0.9
POLR2J3-219ENST00000608621 SLC25A39Q9BZJ4 359 aaPredicted RBP9.44□□□□□ -0.9
POLR2J3-219ENST00000608621 V9GYH0 126 aa9.44□□□□□ -0.9
POLR2J3-219ENST00000608621 PCLOQ9Y6V0 5065 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 SMCO3A2RU48 225 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 H3BRN7 92 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 INSP01308 110 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 IL5P05113 134 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 DEFB130BP0DP73 79 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 DEFB130AP0DP74 79 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 AZU1P20160 251 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 B2MP61769 119 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 ID3Q02535 119 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 FCN2Q15485 313 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 CYP2G1PQ6ZSU1 146 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 ACOT7LQ6ZUV0 252 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 BAP18Q8IXM2 172 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 PSENENQ9NZ42 101 aa9.43□□□□□ -0.9
POLR2J3-219ENST00000608621 TRAV12-2A0A075B6T6 113 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 ADAP1O75689 374 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 RAP2BP61225 183 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 POLR2GP62487 172 aaKnown RBP eCLIP9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 RHOBP62745 196 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 ZNF575Q86XF7 245 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 ZNF738Q8NE65 137 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 LINC01587Q99440 93 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 ATG101Q9BSB4 218 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 SHANK2-AS3Q9BTD1 123 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 HIGD1AQ9Y241 93 aa9.42□□□□□ -0.9
POLR2J3-219ENST00000608621 PLAC8L1A1L4L8 177 aa9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 C9orf170A2RU37 121 aa9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 PMS2P5A8MQ11 134 aa9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 F5H768 121 aa9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 HYPMO75409 117 aa9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 OR5G3P0C626 314 aa9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 PRB4P10163 310 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 RPL7P18124 248 aaKnown RBP9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 TSPOP30536 169 aa9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 FAM3BP58499 235 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 DEDD2Q8WXF8 326 aa9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 PPP1R14DQ9NXH3 145 aa9.41□□□□□ -0.9
POLR2J3-219ENST00000608621 BOLA2-SMG1P6H3BVE0 249 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 CCNKO75909 580 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 NUDT3O95989 172 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 LINC00869P0C866 280 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 CXCL3P19876 107 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 S100A5P33763 92 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 PLP1P60201 277 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 RRAS2P62070 204 aaPredicted RBP9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 SELENOTP62341 195 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 PSG3Q16557 428 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 PATE2Q6UY27 113 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 OR8A1Q8NGG7 326 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 LRRC20Q8TCA0 184 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 UHRF2Q96PU4 802 aa9.4□□□□□ -0.9
POLR2J3-219ENST00000608621 CBY3A6NI87 242 aa9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 ATP5G1P05496 136 aa9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 HTN1P15515 57 aa9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 ATP5G3P48201 142 aa9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 UBE2MP61081 183 aaKnown RBP9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 CCDC190Q86UF4 302 aa9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 SMIM8Q96KF7 97 aa9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 ARL6Q9H0F7 186 aa9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 NPVFQ9HCQ7 196 aa9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 RYR1P21817 5038 aa9.39□□□□□ -0.91
POLR2J3-219ENST00000608621 A0A087X0K7 114 aa9.38□□□□□ -0.91
POLR2J3-219ENST00000608621 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
POLR2J3-219ENST00000608621 SSSCA1O60232 199 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms