RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 SLC25A32Q9H2D1 315 aa13.99□□□□□ -0.17
SGMS1-208ENST00000608287 C11orf68Q9H3H3 251 aaKnown RBP13.99□□□□□ -0.17
SGMS1-208ENST00000608287 C11orf1Q9H5F2 150 aa13.99□□□□□ -0.17
SGMS1-208ENST00000608287 PLA2G2EQ9NZK7 142 aa13.99□□□□□ -0.17
SGMS1-208ENST00000608287 C11orf94C9JXX5 98 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 HYPMO75409 117 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 OR5G3P0C626 314 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 ID1P41134 155 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 GALR1P47211 349 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 RAP2BP61225 183 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 LINC00052Q96N35 136 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 RARRES2Q99969 163 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 MARVELD1Q9BSK0 173 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 HIGD1AQ9Y241 93 aa13.98□□□□□ -0.17
SGMS1-208ENST00000608287 ABCA13Q86UQ4 5058 aa13.97□□□□□ -0.17
SGMS1-208ENST00000608287 SPP1P10451 314 aa13.97□□□□□ -0.17
SGMS1-208ENST00000608287 MORN3Q6PF18 240 aaPredicted RBP13.97□□□□□ -0.17
SGMS1-208ENST00000608287 SCRT1Q9BWW7 348 aa13.97□□□□□ -0.17
SGMS1-208ENST00000608287 SLC25A39Q9BZJ4 359 aaPredicted RBP13.97□□□□□ -0.17
SGMS1-208ENST00000608287 ARL6Q9H0F7 186 aa13.97□□□□□ -0.17
SGMS1-208ENST00000608287 LYRM2Q9NU23 88 aaPredicted RBP13.97□□□□□ -0.17
SGMS1-208ENST00000608287 PRSS29PA6NIE9 313 aa13.96□□□□□ -0.17
SGMS1-208ENST00000608287 H3BRN7 92 aa13.96□□□□□ -0.17
SGMS1-208ENST00000608287 AGPAT2O15120 278 aa13.96□□□□□ -0.17
SGMS1-208ENST00000608287 PSMB3P49720 205 aa13.96□□□□□ -0.17
SGMS1-208ENST00000608287 PLP1P60201 277 aa13.96□□□□□ -0.17
SGMS1-208ENST00000608287 ZNF546Q86UE3 836 aa13.96□□□□□ -0.17
SGMS1-208ENST00000608287 OR11H2Q8NH07 326 aa13.96□□□□□ -0.17
SGMS1-208ENST00000608287 GPR82Q96P67 336 aa13.96□□□□□ -0.17
SGMS1-208ENST00000608287 RSG1Q9BU20 258 aa13.96□□□□□ -0.17
SGMS1-208ENST00000608287 VPS13DQ5THJ4 4388 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 IGSF23A1L1A6 192 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 SOCS3O14543 225 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 MEOX2P50222 304 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 SULT1A1P50225 295 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 NANOS2P60321 138 aaKnown RBP13.95□□□□□ -0.18
SGMS1-208ENST00000608287 S100A7AQ86SG5 101 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 STX12Q86Y82 276 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 TMEM252Q8N6L7 170 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 UHRF2Q96PU4 802 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 SHANK2-AS3Q9BTD1 123 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 UQCC1Q9NVA1 299 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 DNAH6Q9C0G6 4158 aa13.95□□□□□ -0.18
SGMS1-208ENST00000608287 H3BMM0 161 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 ISLRO14498 428 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 SSNA1O43805 119 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 RLN2P04090 185 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 GIG44P09565 113 aaPredicted RBP13.94□□□□□ -0.18
SGMS1-208ENST00000608287 C4BPBP20851 252 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 DEFB1P60022 68 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 LRRC37A5PQ49AS3 106 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 TMEM41BQ5BJD5 291 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 SAMD13Q5VXD3 122 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 C16orf92Q96LL3 132 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 MGST2Q99735 147 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 NMES1Q9C002 83 aa13.94□□□□□ -0.18
SGMS1-208ENST00000608287 IGLL5B9A064 214 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 HLA-DRB4P13762 266 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 S100A11P31949 105 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 HBG1P69891 147 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 HBG2P69892 147 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 FGL1Q08830 312 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 RAB31Q13636 194 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 PXDC1Q5TGL8 231 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 PATE2Q6UY27 113 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 ARV1Q9H2C2 271 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 APLNQ9ULZ1 77 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 HLA-DRB4X5D2U9 266 aa13.93□□□□□ -0.18
SGMS1-208ENST00000608287 PKHD1P08F94 4074 aa13.92□□□□□ -0.18
SGMS1-208ENST00000608287 CAMLGP49069 296 aa13.92□□□□□ -0.18
SGMS1-208ENST00000608287 NUTF2P61970 127 aaKnown RBP13.92□□□□□ -0.18
SGMS1-208ENST00000608287 CYCSP99999 105 aaKnown RBP13.92□□□□□ -0.18
SGMS1-208ENST00000608287 GDF5OSQ5U4N7 250 aa13.92□□□□□ -0.18
SGMS1-208ENST00000608287 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.92□□□□□ -0.18
SGMS1-208ENST00000608287 SAV1Q9H4B6 383 aaPredicted RBP13.92□□□□□ -0.18
SGMS1-208ENST00000608287 CLEC5AQ9NY25 188 aa13.92□□□□□ -0.18
SGMS1-208ENST00000608287 UBE2L5PA0A1B0GUS4 154 aa13.91□□□□□ -0.18
SGMS1-208ENST00000608287 COX7A2P2O60397 106 aa13.91□□□□□ -0.18
SGMS1-208ENST00000608287 IGKV3-20P01619 116 aa13.91□□□□□ -0.18
SGMS1-208ENST00000608287 RPL7P18124 248 aaKnown RBP13.91□□□□□ -0.18
SGMS1-208ENST00000608287 BAXQ07812 192 aa13.91□□□□□ -0.18
SGMS1-208ENST00000608287 FOXI2Q6ZQN5 318 aa13.91□□□□□ -0.18
SGMS1-208ENST00000608287 C17orf77Q96MU5 243 aa13.91□□□□□ -0.18
SGMS1-208ENST00000608287 RPRMQ9NS64 109 aa13.91□□□□□ -0.18
SGMS1-208ENST00000608287 OR5AC2Q9NZP5 309 aa13.91□□□□□ -0.18
SGMS1-208ENST00000608287 WDR83OSQ9Y284 106 aa13.91□□□□□ -0.18
SGMS1-208ENST00000608287 E5RGE8 158 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 H2BFSP57053 126 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 ATP6V1FQ16864 119 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 VWC2Q2TAL6 325 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 EBLN2Q6P2I7 272 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 LINC00305Q7Z4B0 112 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 OR4B1Q8NGF8 309 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 C20orf173Q96LM9 149 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 C1QTNF4Q9BXJ3 329 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 RNF24Q9Y225 148 aa13.9□□□□□ -0.18
SGMS1-208ENST00000608287 F6UB75 175 aa13.89□□□□□ -0.19
SGMS1-208ENST00000608287 MIC13Q5XKP0 118 aa13.89□□□□□ -0.19
SGMS1-208ENST00000608287 Q6ZRG5 221 aa13.89□□□□□ -0.19
SGMS1-208ENST00000608287 SLC25A31Q9H0C2 315 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms