RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 C20orf173Q96LM9 149 aa9.89□□□□□ -0.83
CTSA-218ENST00000607814 MFFQ9GZY8 342 aa9.89□□□□□ -0.83
CTSA-218ENST00000607814 C11orf1Q9H5F2 150 aa9.89□□□□□ -0.83
CTSA-218ENST00000607814 NPVFQ9HCQ7 196 aa9.89□□□□□ -0.83
CTSA-218ENST00000607814 MGAT4CQ9UBM8 478 aa9.89□□□□□ -0.83
CTSA-218ENST00000607814 IGSF23A1L1A6 192 aa9.88□□□□□ -0.83
CTSA-218ENST00000607814 INMT-MINDY4F8WBC2 141 aa9.88□□□□□ -0.83
CTSA-218ENST00000607814 SOCS3O14543 225 aa9.88□□□□□ -0.83
CTSA-218ENST00000607814 IL15RAQ13261 267 aa9.88□□□□□ -0.83
CTSA-218ENST00000607814 C1orf194Q5T5A4 169 aa9.88□□□□□ -0.83
CTSA-218ENST00000607814 PATE2Q6UY27 113 aa9.88□□□□□ -0.83
CTSA-218ENST00000607814 SLC25A39Q9BZJ4 359 aaPredicted RBP9.88□□□□□ -0.83
CTSA-218ENST00000607814 ARL6Q9H0F7 186 aa9.88□□□□□ -0.83
CTSA-218ENST00000607814 PFDN2Q9UHV9 154 aa9.88□□□□□ -0.83
CTSA-218ENST00000607814 DNAH17Q9UFH2 4485 aa9.88□□□□□ -0.83
CTSA-218ENST00000607814 H3BMM0 161 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 HYPMO75409 117 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 PRR20EP86478 221 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 PRR20CP86479 221 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 PRR20DP86480 221 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 PRR20BP86481 221 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 PRR20AP86496 221 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 LRRC37A5PQ49AS3 106 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 TEPPQ6URK8 271 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 C16orf92Q96LL3 132 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 MGST2Q99735 147 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 XCL2Q9UBD3 114 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 FBXL17Q9UF56 701 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 HIGD1AQ9Y241 93 aa9.87□□□□□ -0.83
CTSA-218ENST00000607814 H3BRN7 92 aa9.86□□□□□ -0.83
CTSA-218ENST00000607814 AGPAT2O15120 278 aa9.86□□□□□ -0.83
CTSA-218ENST00000607814 CFDP00746 253 aaPredicted RBP9.86□□□□□ -0.83
CTSA-218ENST00000607814 ZNF705DP0CH99 300 aaPredicted RBP9.86□□□□□ -0.83
CTSA-218ENST00000607814 ZNF705BP0CI00 300 aaPredicted RBP9.86□□□□□ -0.83
CTSA-218ENST00000607814 HLA-DMBP28068 263 aa9.86□□□□□ -0.83
CTSA-218ENST00000607814 NUP62P37198 522 aaPredicted RBP9.86□□□□□ -0.83
CTSA-218ENST00000607814 NANOS2P60321 138 aaKnown RBP9.86□□□□□ -0.83
CTSA-218ENST00000607814 RAP2BP61225 183 aa9.86□□□□□ -0.83
CTSA-218ENST00000607814 RNF182Q8N6D2 247 aa9.86□□□□□ -0.83
CTSA-218ENST00000607814 OR4B1Q8NGF8 309 aa9.86□□□□□ -0.83
CTSA-218ENST00000607814 C2CD4CQ8TF44 421 aa9.86□□□□□ -0.83
CTSA-218ENST00000607814 GPN1Q9HCN4 374 aaPredicted RBP9.86□□□□□ -0.83
CTSA-218ENST00000607814 H3BTX0 84 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 RBMY1A1P0DJD3 496 aaKnown RBP9.85□□□□□ -0.83
CTSA-218ENST00000607814 RBMY1CP0DJD4 496 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 SPP1P10451 314 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 ID1P41134 155 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 GALR1P47211 349 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 RBMY1FQ15415 496 aaKnown RBP9.85□□□□□ -0.83
CTSA-218ENST00000607814 RGS21Q2M5E4 152 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 MORN5Q5VZ52 161 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 MIC13Q5XKP0 118 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 TMEM252Q8N6L7 170 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 CSNK1G2-AS1Q8NCQ2 148 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 SHANK2-AS3Q9BTD1 123 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 ARV1Q9H2C2 271 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 C11orf68Q9H3H3 251 aaKnown RBP9.85□□□□□ -0.83
CTSA-218ENST00000607814 SLC45A2Q9UMX9 530 aa9.85□□□□□ -0.83
CTSA-218ENST00000607814 TRAV8-2A0A0B4J237 113 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 IGHV4-28A0A0C4DH34 117 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 UBE2L5PA0A1B0GUS4 154 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 A0A1B0GVY2 172 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 H0YIZ8 118 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 PTTG1O95997 202 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 HLA-DRB4P13762 266 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 PVALBP20472 110 aaPredicted RBP9.84□□□□□ -0.83
CTSA-218ENST00000607814 PSMB3P49720 205 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 SELENOTP62341 195 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 NHLH2Q02577 135 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 MORN3Q6PF18 240 aaPredicted RBP9.84□□□□□ -0.83
CTSA-218ENST00000607814 C11orf45Q8TAV5 145 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 SLC35B3Q9H1N7 401 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 SAV1Q9H4B6 383 aaPredicted RBP9.84□□□□□ -0.83
CTSA-218ENST00000607814 SEPSECSQ9HD40 501 aaKnown RBP9.84□□□□□ -0.83
CTSA-218ENST00000607814 LYRM2Q9NU23 88 aaPredicted RBP9.84□□□□□ -0.83
CTSA-218ENST00000607814 OR5AC2Q9NZP5 309 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 HLA-DRB4X5D2U9 266 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 X6R8D5 127 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 DNAH11Q96DT5 4516 aa9.84□□□□□ -0.83
CTSA-218ENST00000607814 IGHV3OR16-12A0A075B7B8 117 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 TRAV5A0A0B4J249 113 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 FNDC10F2Z333 226 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 ISLRO14498 428 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 CAMLGP49069 296 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 SULT1A1P50225 295 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 H2BFSP57053 126 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 PLP1P60201 277 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 FAM78BQ5VT40 261 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 LINC00305Q7Z4B0 112 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 Q8NAQ8 132 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 TMEM37Q8WXS4 190 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 MARVELD1Q9BSK0 173 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 GGACTQ9BVM4 153 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 UQCC1Q9NVA1 299 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 PKD1P98161 4303 aa9.83□□□□□ -0.84
CTSA-218ENST00000607814 SSNA1O43805 119 aa9.82□□□□□ -0.84
CTSA-218ENST00000607814 BAXQ07812 192 aa9.82□□□□□ -0.84
CTSA-218ENST00000607814 EBLN2Q6P2I7 272 aa9.82□□□□□ -0.84
CTSA-218ENST00000607814 FOXI2Q6ZQN5 318 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms