RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 Q8NAQ8 132 aa10.48□□□□□ -0.73
PKNOX1-210ENST00000607049 CLUHP3Q96NS8 147 aa10.48□□□□□ -0.73
PKNOX1-210ENST00000607049 SHANK2-AS3Q9BTD1 123 aa10.48□□□□□ -0.73
PKNOX1-210ENST00000607049 SLC25A39Q9BZJ4 359 aaPredicted RBP10.48□□□□□ -0.73
PKNOX1-210ENST00000607049 CSMD3Q7Z407 3707 aa10.48□□□□□ -0.73
PKNOX1-210ENST00000607049 K7EPK0 472 aa10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 SOCS3O14543 225 aa10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 TCTAP57738 103 aa10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 PLP1P60201 277 aa10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 S100A10P60903 97 aa10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 TMEM182Q6ZP80 229 aaPredicted RBP10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 STX12Q86Y82 276 aa10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 ARL6Q9H0F7 186 aa10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 PTTG2Q9NZH5 202 aa10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 SACSQ9NZJ4 4579 aa10.47□□□□□ -0.73
PKNOX1-210ENST00000607049 TMEM189A5PLL7 270 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 SMIM9A6NGZ8 99 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 H3BRN7 92 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 UPK1BO75841 260 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 DUSP14O95147 198 aaKnown RBP10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 HBG1P69891 147 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 HBG2P69892 147 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 PSG9Q00887 426 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 SLC38A11Q08AI6 406 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 Q6ZRG5 221 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 CSNK1G2-AS1Q8NCQ2 148 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 C2CD4CQ8TF44 421 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 LINC00476Q8WZB0 136 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 SCRT1Q9BWW7 348 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 GOLT1BQ9Y3E0 138 aa10.46□□□□□ -0.73
PKNOX1-210ENST00000607049 ELOA3CA0A087WX78 387 aaPredicted RBP10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 A6NHS1 94 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 COX7A2P2O60397 106 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 CCNKO75909 580 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 RLN2P04090 185 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 S100A11P31949 105 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 DEFA1P59665 94 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 DEFA3P59666 94 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 FAM78BQ5VT40 261 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 ARV1Q9H2C2 271 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 UQCC1Q9NVA1 299 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 X6R8D5 127 aa10.45□□□□□ -0.74
PKNOX1-210ENST00000607049 IGHV3OR16-12A0A075B7B8 117 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 A0A0J9YX75 114 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 AGPAT2O15120 278 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 PRAF2O60831 178 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 CST7O76096 145 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 AMBPP02760 352 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 RBMY1A1P0DJD3 496 aaKnown RBP10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 RBMY1CP0DJD4 496 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 CAMLGP49069 296 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 RBMY1FQ15415 496 aaKnown RBP10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 GDF5OSQ5U4N7 250 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 NEU1Q99519 415 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 TMEM208Q9BTX3 173 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 PPP1R14DQ9NXH3 145 aa10.44□□□□□ -0.74
PKNOX1-210ENST00000607049 TEX48A0A1B0GUV7 120 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 SULT1A1P50225 295 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 C10orf113Q5VZT2 155 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 LINC00305Q7Z4B0 112 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 BPIFA4PQ86YQ2 179 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 ZNF738Q8NE65 137 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 OR1L4Q8NGR5 311 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 UHRF2Q96PU4 802 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 BATF3Q9NR55 127 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 LYRM2Q9NU23 88 aaPredicted RBP10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 RFNGQ9Y644 331 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 AGRNO00468 2067 aa10.43□□□□□ -0.74
PKNOX1-210ENST00000607049 TRAV10A0A0B4J240 114 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 FAM24AA6NFZ4 105 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 F6UB75 175 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 CXCL2P19875 107 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 FXYD7P58549 80 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 DEFB1P60022 68 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 CYCSP99999 105 aaKnown RBP10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 ARL16Q0P5N6 197 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 RAB32Q13637 225 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 ATP6V1FQ16864 119 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 ZNF705AQ6ZN79 300 aaPredicted RBP10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 PFDN5Q99471 154 aa10.42□□□□□ -0.74
PKNOX1-210ENST00000607049 A0A087X0K7 114 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 IGLL5B9A064 214 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 INMT-MINDY4F8WBC2 141 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 HBE1P02100 147 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 SPART-AS1P0CW21 52 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 BAXQ07812 192 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 LGALS9CQ6DKI2 356 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 LCN15Q6UWW0 184 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 NRARPQ7Z6K4 114 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 SLC50A1Q9BRV3 221 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 SLC25A31Q9H0C2 315 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 SLC35B3Q9H1N7 401 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 DNAJC4Q9NNZ3 241 aa10.41□□□□□ -0.74
PKNOX1-210ENST00000607049 ZNF705FA8MVS1 300 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-210ENST00000607049 MPDU1O75352 247 aa10.4□□□□□ -0.74
PKNOX1-210ENST00000607049 ZNF705DP0CH99 300 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-210ENST00000607049 ZNF705BP0CI00 300 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-210ENST00000607049 CNN1P51911 297 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms