RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 H3BRN7 92 aa12.12□□□□□ -0.47
LINC00240-203ENST00000606878 SOCS3O14543 225 aa12.12□□□□□ -0.47
LINC00240-203ENST00000606878 CAMLGP49069 296 aa12.12□□□□□ -0.47
LINC00240-203ENST00000606878 Q6ZRG5 221 aa12.12□□□□□ -0.47
LINC00240-203ENST00000606878 MGST2Q99735 147 aa12.12□□□□□ -0.47
LINC00240-203ENST00000606878 SCRT1Q9BWW7 348 aa12.12□□□□□ -0.47
LINC00240-203ENST00000606878 SLC25A31Q9H0C2 315 aa12.12□□□□□ -0.47
LINC00240-203ENST00000606878 ARV1Q9H2C2 271 aa12.12□□□□□ -0.47
LINC00240-203ENST00000606878 ELOA3CA0A087WX78 387 aaPredicted RBP12.11□□□□□ -0.47
LINC00240-203ENST00000606878 ATF4P18848 351 aaPredicted RBP12.11□□□□□ -0.47
LINC00240-203ENST00000606878 VWC2Q2TAL6 325 aa12.11□□□□□ -0.47
LINC00240-203ENST00000606878 LRRC37A5PQ49AS3 106 aa12.11□□□□□ -0.47
LINC00240-203ENST00000606878 PATE2Q6UY27 113 aa12.11□□□□□ -0.47
LINC00240-203ENST00000606878 UHRF2Q96PU4 802 aa12.11□□□□□ -0.47
LINC00240-203ENST00000606878 WDR83OSQ9Y284 106 aa12.11□□□□□ -0.47
LINC00240-203ENST00000606878 GIG44P09565 113 aaPredicted RBP12.1□□□□□ -0.47
LINC00240-203ENST00000606878 HLA-DRB4P13762 266 aa12.1□□□□□ -0.47
LINC00240-203ENST00000606878 H2BFSP57053 126 aa12.1□□□□□ -0.47
LINC00240-203ENST00000606878 FGL1Q08830 312 aa12.1□□□□□ -0.47
LINC00240-203ENST00000606878 SPATA31B1PQ5VZV4 182 aa12.1□□□□□ -0.47
LINC00240-203ENST00000606878 EBLN2Q6P2I7 272 aa12.1□□□□□ -0.47
LINC00240-203ENST00000606878 FOXI2Q6ZQN5 318 aa12.1□□□□□ -0.47
LINC00240-203ENST00000606878 SAV1Q9H4B6 383 aaPredicted RBP12.1□□□□□ -0.47
LINC00240-203ENST00000606878 DNAJC4Q9NNZ3 241 aa12.1□□□□□ -0.47
LINC00240-203ENST00000606878 RPRMQ9NS64 109 aa12.1□□□□□ -0.47
LINC00240-203ENST00000606878 HLA-DRB4X5D2U9 266 aa12.1□□□□□ -0.47
LINC00240-203ENST00000606878 COX7A2P2O60397 106 aa12.09□□□□□ -0.47
LINC00240-203ENST00000606878 PTTG1O95997 202 aa12.09□□□□□ -0.47
LINC00240-203ENST00000606878 NHLH2Q02577 135 aa12.09□□□□□ -0.47
LINC00240-203ENST00000606878 BAXQ07812 192 aa12.09□□□□□ -0.47
LINC00240-203ENST00000606878 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.09□□□□□ -0.47
LINC00240-203ENST00000606878 LINC00305Q7Z4B0 112 aa12.09□□□□□ -0.47
LINC00240-203ENST00000606878 PPP1R1CQ8WVI7 109 aa12.09□□□□□ -0.47
LINC00240-203ENST00000606878 C1QTNF4Q9BXJ3 329 aa12.09□□□□□ -0.47
LINC00240-203ENST00000606878 OR5AC2Q9NZP5 309 aa12.09□□□□□ -0.47
LINC00240-203ENST00000606878 H0YIZ8 118 aa12.08□□□□□ -0.48
LINC00240-203ENST00000606878 RPL29P47914 159 aaKnown RBP12.08□□□□□ -0.48
LINC00240-203ENST00000606878 C10orf113Q5VZT2 155 aa12.08□□□□□ -0.48
LINC00240-203ENST00000606878 MIC13Q5XKP0 118 aa12.08□□□□□ -0.48
LINC00240-203ENST00000606878 OR4B1Q8NGF8 309 aa12.08□□□□□ -0.48
LINC00240-203ENST00000606878 LRRC20Q8TCA0 184 aa12.08□□□□□ -0.48
LINC00240-203ENST00000606878 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
LINC00240-203ENST00000606878 TMEM37Q8WXS4 190 aa12.08□□□□□ -0.48
LINC00240-203ENST00000606878 C17orf77Q96MU5 243 aa12.08□□□□□ -0.48
LINC00240-203ENST00000606878 UBE2L5PA0A1B0GUS4 154 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 MPDU1O75352 247 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 IGKV3-20P01619 116 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 PET100P0DJ07 73 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 C4BPBP20851 252 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 FGF7P21781 194 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 DEFB1P60022 68 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 PRR20EP86478 221 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 PRR20CP86479 221 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 PRR20DP86480 221 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 PRR20BP86481 221 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 PRR20AP86496 221 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 EWSR1Q01844 656 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00240-203ENST00000606878 GDF5OSQ5U4N7 250 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 OR5C1Q8NGR4 320 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 OR1L4Q8NGR5 311 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 CLUHP3Q96NS8 147 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 RNF126Q9BV68 326 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 CLEC5AQ9NY25 188 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 XCL2Q9UBD3 114 aa12.07□□□□□ -0.48
LINC00240-203ENST00000606878 MPC2O95563 127 aa12.06□□□□□ -0.48
LINC00240-203ENST00000606878 BPIFA4PQ86YQ2 179 aa12.06□□□□□ -0.48
LINC00240-203ENST00000606878 CSNK1G2-AS1Q8NCQ2 148 aa12.06□□□□□ -0.48
LINC00240-203ENST00000606878 C20orf173Q96LM9 149 aa12.06□□□□□ -0.48
LINC00240-203ENST00000606878 PFDN5Q99471 154 aa12.06□□□□□ -0.48
LINC00240-203ENST00000606878 SLC39A9Q9NUM3 307 aa12.06□□□□□ -0.48
LINC00240-203ENST00000606878 ALG5Q9Y673 324 aa12.06□□□□□ -0.48
LINC00240-203ENST00000606878 A0A087X0K7 114 aa12.05□□□□□ -0.48
LINC00240-203ENST00000606878 A0A0J9YX75 114 aa12.05□□□□□ -0.48
LINC00240-203ENST00000606878 CXorf65A6NEN9 183 aa12.05□□□□□ -0.48
LINC00240-203ENST00000606878 F6UB75 175 aa12.05□□□□□ -0.48
LINC00240-203ENST00000606878 B2MP61769 119 aa12.05□□□□□ -0.48
LINC00240-203ENST00000606878 PSG9Q00887 426 aa12.05□□□□□ -0.48
LINC00240-203ENST00000606878 OPCMLQ14982 345 aa12.05□□□□□ -0.48
LINC00240-203ENST00000606878 FAM78BQ5VT40 261 aa12.05□□□□□ -0.48
LINC00240-203ENST00000606878 IGFL4Q6B9Z1 124 aa12.05□□□□□ -0.48
LINC00240-203ENST00000606878 TRAV8-2A0A0B4J237 113 aa12.04□□□□□ -0.48
LINC00240-203ENST00000606878 MIFP14174 115 aa12.04□□□□□ -0.48
LINC00240-203ENST00000606878 CLINT1Q14677 625 aa12.04□□□□□ -0.48
LINC00240-203ENST00000606878 C11orf68Q9H3H3 251 aaKnown RBP12.04□□□□□ -0.48
LINC00240-203ENST00000606878 PXMP4Q9Y6I8 212 aa12.04□□□□□ -0.48
LINC00240-203ENST00000606878 DNAH7Q8WXX0 4024 aa12.04□□□□□ -0.48
LINC00240-203ENST00000606878 ZNF705EA8MWA4 302 aaPredicted RBP12.03□□□□□ -0.48
LINC00240-203ENST00000606878 MRPS12O15235 138 aaKnown RBP12.03□□□□□ -0.48
LINC00240-203ENST00000606878 DUSP14O95147 198 aaKnown RBP12.03□□□□□ -0.48
LINC00240-203ENST00000606878 PMS2P11Q13670 270 aa12.03□□□□□ -0.48
LINC00240-203ENST00000606878 RNF182Q8N6D2 247 aa12.03□□□□□ -0.48
LINC00240-203ENST00000606878 ZNF709Q8N972 641 aa12.03□□□□□ -0.48
LINC00240-203ENST00000606878 ZNF738Q8NE65 137 aa12.03□□□□□ -0.48
LINC00240-203ENST00000606878 C11orf45Q8TAV5 145 aa12.03□□□□□ -0.48
LINC00240-203ENST00000606878 NPCDR1Q9BY65 106 aa12.03□□□□□ -0.48
LINC00240-203ENST00000606878 MED28Q9H204 178 aa12.03□□□□□ -0.48
LINC00240-203ENST00000606878 TENM2Q9NT68 2774 aa12.02□□□□□ -0.48
LINC00240-203ENST00000606878 DEFB4AO15263 64 aa12.02□□□□□ -0.49
LINC00240-203ENST00000606878 CXCL2P19875 107 aa12.02□□□□□ -0.49
LINC00240-203ENST00000606878 CXCL3P19876 107 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms