RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 DEFB131AP59861 70 aa17.08■□□□□ 0.32
SNX5-217ENST00000606557 HAGHQ16775 308 aa17.08■□□□□ 0.32
SNX5-217ENST00000606557 C10orf113Q5VZT2 155 aa17.08■□□□□ 0.32
SNX5-217ENST00000606557 LINC00305Q7Z4B0 112 aa17.08■□□□□ 0.32
SNX5-217ENST00000606557 FXYD6-FXYD2A0A087WZ82 144 aa17.07■□□□□ 0.32
SNX5-217ENST00000606557 NHLRC4P0CG21 123 aaPredicted RBP17.07■□□□□ 0.32
SNX5-217ENST00000606557 Q6ZNX1 250 aa17.07■□□□□ 0.32
SNX5-217ENST00000606557 OR1L4Q8NGR5 311 aa17.07■□□□□ 0.32
SNX5-217ENST00000606557 C17orf77Q96MU5 243 aa17.07■□□□□ 0.32
SNX5-217ENST00000606557 SEPSECSQ9HD40 501 aaKnown RBP17.07■□□□□ 0.32
SNX5-217ENST00000606557 DNAJC4Q9NNZ3 241 aa17.07■□□□□ 0.32
SNX5-217ENST00000606557 AGRNO00468 2067 aa17.07■□□□□ 0.32
SNX5-217ENST00000606557 SOCS3O14543 225 aa17.06■□□□□ 0.32
SNX5-217ENST00000606557 IFNA5P01569 189 aa17.06■□□□□ 0.32
SNX5-217ENST00000606557 PFDN5Q99471 154 aa17.06■□□□□ 0.32
SNX5-217ENST00000606557 PARD6GQ9BYG4 376 aaPredicted RBP17.06■□□□□ 0.32
SNX5-217ENST00000606557 KCNIP2Q9NS61 270 aa17.06■□□□□ 0.32
SNX5-217ENST00000606557 TNFSF18Q9UNG2 199 aa17.06■□□□□ 0.32
SNX5-217ENST00000606557 RNF24Q9Y225 148 aa17.06■□□□□ 0.32
SNX5-217ENST00000606557 LOC102724200A0A096LPH7 203 aaPredicted RBP17.05■□□□□ 0.32
SNX5-217ENST00000606557 RNF222A6NCQ9 220 aa17.05■□□□□ 0.32
SNX5-217ENST00000606557 RPL7P18124 248 aaKnown RBP17.05■□□□□ 0.32
SNX5-217ENST00000606557 MORN5Q5VZ52 161 aa17.05■□□□□ 0.32
SNX5-217ENST00000606557 ZNF709Q8N972 641 aa17.05■□□□□ 0.32
SNX5-217ENST00000606557 RSG1Q9BU20 258 aa17.05■□□□□ 0.32
SNX5-217ENST00000606557 C17orf112F2Z3M2 114 aa17.04■□□□□ 0.32
SNX5-217ENST00000606557 SMLR1H3BR10 107 aa17.04■□□□□ 0.32
SNX5-217ENST00000606557 MRPS12O15235 138 aaKnown RBP17.04■□□□□ 0.32
SNX5-217ENST00000606557 MEOX2P50222 304 aa17.04■□□□□ 0.32
SNX5-217ENST00000606557 SNRPD3P62318 126 aaKnown RBP17.04■□□□□ 0.32
SNX5-217ENST00000606557 PSMG4Q5JS54 123 aa17.04■□□□□ 0.32
SNX5-217ENST00000606557 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.04■□□□□ 0.32
SNX5-217ENST00000606557 INO80EQ8NBZ0 244 aaPredicted RBP17.04■□□□□ 0.32
SNX5-217ENST00000606557 SCGB1C1Q8TD33 95 aa17.04■□□□□ 0.32
SNX5-217ENST00000606557 TM2D3Q9BRN9 247 aa17.04■□□□□ 0.32
SNX5-217ENST00000606557 PSMB3P49720 205 aa17.03■□□□□ 0.32
SNX5-217ENST00000606557 GCSAMLQ5JQS6 135 aa17.03■□□□□ 0.32
SNX5-217ENST00000606557 GATAD1Q8WUU5 269 aa17.03■□□□□ 0.32
SNX5-217ENST00000606557 HUWE1Q7Z6Z7 4374 aaKnown RBP17.03■□□□□ 0.32
SNX5-217ENST00000606557 TENM3Q9P273 2699 aa17.03■□□□□ 0.32
SNX5-217ENST00000606557 ATF4P18848 351 aaPredicted RBP17.02■□□□□ 0.32
SNX5-217ENST00000606557 SAMD13Q5VXD3 122 aa17.02■□□□□ 0.32
SNX5-217ENST00000606557 A0A087X0K7 114 aa17.01■□□□□ 0.31
SNX5-217ENST00000606557 ISLRO14498 428 aa17.01■□□□□ 0.31
SNX5-217ENST00000606557 RPL35AP18077 110 aaKnown RBP17.01■□□□□ 0.31
SNX5-217ENST00000606557 ID1P41134 155 aa17.01■□□□□ 0.31
SNX5-217ENST00000606557 ZNF266Q14584 549 aa17.01■□□□□ 0.31
SNX5-217ENST00000606557 BPIFA4PQ86YQ2 179 aa17■□□□□ 0.31
SNX5-217ENST00000606557 TRAV5A0A0B4J249 113 aa16.99■□□□□ 0.31
SNX5-217ENST00000606557 ARPC5O15511 151 aa16.99■□□□□ 0.31
SNX5-217ENST00000606557 APOC4P55056 127 aa16.99■□□□□ 0.31
SNX5-217ENST00000606557 C16orf92Q96LL3 132 aa16.99■□□□□ 0.31
SNX5-217ENST00000606557 SPATA25Q9BR10 227 aa16.99■□□□□ 0.31
SNX5-217ENST00000606557 ZMAT4Q9H898 229 aa16.99■□□□□ 0.31
SNX5-217ENST00000606557 NBEAL2Q6ZNJ1 2754 aa16.99■□□□□ 0.31
SNX5-217ENST00000606557 KIR2DL5BA0A0G2JN68 375 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 KIR2DL5BA0A0G2JPC4 375 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 KNCNA6PVL3 124 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 FFAR4Q5NUL3 377 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 FAM78BQ5VT40 261 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 KIR2DL5AQ8N109 375 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 KIR2DL5BQ8NHK3 375 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 LINC00052Q96N35 136 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 TIMM9Q9Y5J7 89 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 RFNGQ9Y644 331 aa16.98■□□□□ 0.31
SNX5-217ENST00000606557 TRAV8-2A0A0B4J237 113 aa16.97■□□□□ 0.31
SNX5-217ENST00000606557 ACTL10Q5JWF8 245 aa16.97■□□□□ 0.31
SNX5-217ENST00000606557 SPATA31B1PQ5VZV4 182 aa16.97■□□□□ 0.31
SNX5-217ENST00000606557 TRPT1Q86TN4 253 aaKnown RBP16.97■□□□□ 0.31
SNX5-217ENST00000606557 STHQ8IWL8 128 aa16.97■□□□□ 0.31
SNX5-217ENST00000606557 C20orf173Q96LM9 149 aa16.97■□□□□ 0.31
SNX5-217ENST00000606557 U3KQK5 164 aa16.97■□□□□ 0.31
SNX5-217ENST00000606557 IGLC2P0DOY2 106 aa16.96■□□□□ 0.31
SNX5-217ENST00000606557 OR11H4Q8NGC9 324 aa16.96■□□□□ 0.31
SNX5-217ENST00000606557 ST6GAL2Q96JF0 529 aa16.96■□□□□ 0.31
SNX5-217ENST00000606557 RCHY1Q96PM5 261 aa16.96■□□□□ 0.31
SNX5-217ENST00000606557 MRPL32Q9BYC8 188 aaKnown RBP16.96■□□□□ 0.31
SNX5-217ENST00000606557 RETNQ9HD89 108 aa16.96■□□□□ 0.31
SNX5-217ENST00000606557 CXCL2P19875 107 aa16.95■□□□□ 0.3
SNX5-217ENST00000606557 DEFB1P60022 68 aa16.95■□□□□ 0.3
SNX5-217ENST00000606557 LCN15Q6UWW0 184 aa16.95■□□□□ 0.3
SNX5-217ENST00000606557 MIR17HGQ75NE6 70 aa16.95■□□□□ 0.3
SNX5-217ENST00000606557 HSD17B11Q8NBQ5 300 aa16.95■□□□□ 0.3
SNX5-217ENST00000606557 MFFQ9GZY8 342 aa16.95■□□□□ 0.3
SNX5-217ENST00000606557 HRH4Q9H3N8 390 aa16.95■□□□□ 0.3
SNX5-217ENST00000606557 STAB2Q8WWQ8 2551 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 HMSDA8MTL9 139 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 H3BQ15 152 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 UBE2CO00762 179 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 SNRPCP09234 159 aaKnown RBP16.94■□□□□ 0.3
SNX5-217ENST00000606557 IGFL4Q6B9Z1 124 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 RPL7L1Q6DKI1 246 aaKnown RBP16.94■□□□□ 0.3
SNX5-217ENST00000606557 RNF182Q8N6D2 247 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 FAM167A-AS1Q96KT0 104 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 SLC25A2Q9BXI2 301 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 SAV1Q9H4B6 383 aaPredicted RBP16.94■□□□□ 0.3
SNX5-217ENST00000606557 TMEM14CQ9P0S9 112 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 FUT9Q9Y231 359 aa16.94■□□□□ 0.3
SNX5-217ENST00000606557 HLA-DRB4P13762 266 aa16.93■□□□□ 0.3
SNX5-217ENST00000606557 ATP6V0CP27449 155 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms