RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 NHP2Q9NX24 153 aaKnown RBP3.79□□□□□ -1.8
LINC01109-201ENST00000603837 R4GMQ9 66 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 MPDZO75970 2070 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 A0A1B0GX51 115 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 CHEK1O14757 476 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 APOHP02749 345 aaPredicted RBP3.79□□□□□ -1.8
LINC01109-201ENST00000603837 OR5AL1P0C617 328 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 GP9P14770 177 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 GATA1P15976 413 aaPredicted RBP3.79□□□□□ -1.8
LINC01109-201ENST00000603837 COX5AP20674 150 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 HSPE1P61604 102 aaKnown RBP3.79□□□□□ -1.8
LINC01109-201ENST00000603837 FHL5Q5TD97 284 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 GAPTQ8N292 157 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 PHLDA1Q8WV24 401 aaPredicted RBP3.79□□□□□ -1.8
LINC01109-201ENST00000603837 IL1F10Q8WWZ1 152 aa3.79□□□□□ -1.8
LINC01109-201ENST00000603837 CNRIP1Q96F85 164 aaPredicted RBP3.79□□□□□ -1.8
LINC01109-201ENST00000603837 MRPL32Q9BYC8 188 aaKnown RBP3.79□□□□□ -1.8
LINC01109-201ENST00000603837 F11RQ9Y624 299 aaKnown RBP3.79□□□□□ -1.8
LINC01109-201ENST00000603837 SEC16AO15027 2179 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 ABCA7Q8IZY2 2146 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 HCFC1P51610 2035 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 KNTC1P50748 2209 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 EXPH5Q8NEV8 1989 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 TRAV4A0A0B4J268 109 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 OR2H2O95918 312 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 IGHG3P01860 377 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 LIFP15018 202 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 BCL3P20749 454 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 LOXL3P58215 753 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 HES1Q14469 280 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 Q6ZS92 163 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 OR10J6PQ8NGY7 276 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 CHCHD1Q96BP2 118 aaKnown RBP3.78□□□□□ -1.8
LINC01109-201ENST00000603837 PRR25Q96S07 402 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 GPX7Q96SL4 187 aaPredicted RBP3.78□□□□□ -1.8
LINC01109-201ENST00000603837 SPRY4Q9C004 299 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 STARD5Q9NSY2 213 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 COL4A3Q01955 1670 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 POLEQ07864 2286 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 LRRK1Q38SD2 2015 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 IAPPP10997 89 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 RPL27P61353 136 aaKnown RBP3.78□□□□□ -1.8
LINC01109-201ENST00000603837 LY6DQ14210 128 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 FXYD3Q14802 87 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 ASPHD1Q5U4P2 390 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 SLC25A48Q6ZT89 311 aaKnown RBP3.78□□□□□ -1.8
LINC01109-201ENST00000603837 URB1-AS1Q96HZ7 61 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 C1orf147Q96MC9 270 aaPredicted RBP3.78□□□□□ -1.8
LINC01109-201ENST00000603837 TXNDC17Q9BRA2 123 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 HDHD3Q9BSH5 251 aaPredicted RBP3.78□□□□□ -1.8
LINC01109-201ENST00000603837 C21orf62Q9NYP8 219 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 PSENENQ9NZ42 101 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 LHFPL6Q9Y693 200 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 PCDH15Q96QU1 1955 aa3.78□□□□□ -1.8
LINC01109-201ENST00000603837 PRRC2CQ9Y520 2896 aaKnown RBP3.78□□□□□ -1.81
LINC01109-201ENST00000603837 SCN3AQ9NY46 2000 aa3.78□□□□□ -1.81
LINC01109-201ENST00000603837 C2orf16Q68DN1 1984 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 IZUMO1RA6ND01 250 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 NCBP2LA6PVI3 153 aaKnown RBP3.77□□□□□ -1.81
LINC01109-201ENST00000603837 TIMM23O14925 209 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 IGKV1D-16P01601 117 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 ASAH2BP0C7U1 165 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 INAFM2P0DMQ5 153 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 KIR2DS2P43631 304 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 TMEM147Q9BVK8 224 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 C19orf25Q9UFG5 118 aaPredicted RBP3.77□□□□□ -1.81
LINC01109-201ENST00000603837 TIMM8BQ9Y5J9 83 aaPredicted RBP3.77□□□□□ -1.81
LINC01109-201ENST00000603837 LY96Q9Y6Y9 160 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 FREM2Q5SZK8 3169 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 PCNX3Q9H6A9 2034 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 LOC101059948A0A1B0GTJ6 334 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 C15orf61A6NNL5 157 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 GGTLC3B5MD39 225 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 C9JCJ5 164 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 PLXNB1O43157 2135 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 CISD3P0C7P0 127 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 PAPPA-AS1Q5QFB9 102 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 C9orf153Q5TBE3 101 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 CFAP126Q5VTH2 177 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 Q5XG85 94 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 Q6ZS49 121 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 C1QL2Q7Z5L3 287 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 OR52N5Q8NH56 324 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 FGF14Q92915 247 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 S1PR3Q99500 378 aa3.77□□□□□ -1.81
LINC01109-201ENST00000603837 TCF20Q9UGU0 1960 aaKnown RBP3.77□□□□□ -1.81
LINC01109-201ENST00000603837 SRSF10O75494 262 aaKnown RBP3.76□□□□□ -1.81
LINC01109-201ENST00000603837 RFPL3SP0C7P2 107 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 DSCR4P56555 118 aaPredicted RBP3.76□□□□□ -1.81
LINC01109-201ENST00000603837 C6orf201Q7Z4U5 140 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 TEN1Q86WV5 123 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 TMEM219Q86XT9 240 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 C10orf126Q8N4M7 172 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 WFDC11Q8NEX6 87 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 LINC00479Q96M42 142 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 MLST8Q9BVC4 326 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 PLA2G2FQ9BZM2 168 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 OSTCQ9NRP0 149 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 ASXL3Q9C0F0 2248 aa3.76□□□□□ -1.81
LINC01109-201ENST00000603837 C5orf67F2Z3F1 127 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms