RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 NPCDR1Q9BY65 106 aa11.9□□□□□ -0.5
PPFIA3-213ENST00000602905 SMIM3Q9BZL3 60 aa11.9□□□□□ -0.5
PPFIA3-213ENST00000602905 SLC25A32Q9H2D1 315 aa11.9□□□□□ -0.5
PPFIA3-213ENST00000602905 DNAJC4Q9NNZ3 241 aa11.9□□□□□ -0.5
PPFIA3-213ENST00000602905 SLC39A9Q9NUM3 307 aa11.9□□□□□ -0.5
PPFIA3-213ENST00000602905 PXMP4Q9Y6I8 212 aa11.9□□□□□ -0.5
PPFIA3-213ENST00000602905 APOC4P55056 127 aa11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 PRR20EP86478 221 aa11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 PRR20CP86479 221 aa11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 PRR20DP86480 221 aa11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 PRR20BP86481 221 aa11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 PRR20AP86496 221 aa11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 LEMD1Q68G75 181 aa11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 SPATA25Q9BR10 227 aa11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 WDR61Q9GZS3 305 aaKnown RBP11.89□□□□□ -0.51
PPFIA3-213ENST00000602905 FXYD6-FXYD2A0A087WZ82 144 aa11.88□□□□□ -0.51
PPFIA3-213ENST00000602905 PSMG4Q5JS54 123 aa11.88□□□□□ -0.51
PPFIA3-213ENST00000602905 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
PPFIA3-213ENST00000602905 STHQ8IWL8 128 aa11.88□□□□□ -0.51
PPFIA3-213ENST00000602905 FAM24BQ8N5W8 94 aa11.88□□□□□ -0.51
PPFIA3-213ENST00000602905 CITED4Q96RK1 184 aa11.88□□□□□ -0.51
PPFIA3-213ENST00000602905 RSG1Q9BU20 258 aa11.88□□□□□ -0.51
PPFIA3-213ENST00000602905 U3KQK5 164 aa11.88□□□□□ -0.51
PPFIA3-213ENST00000602905 RPL35AP18077 110 aaKnown RBP11.87□□□□□ -0.51
PPFIA3-213ENST00000602905 PSMB3P49720 205 aa11.87□□□□□ -0.51
PPFIA3-213ENST00000602905 GATAD1Q8WUU5 269 aa11.87□□□□□ -0.51
PPFIA3-213ENST00000602905 TMEM37Q8WXS4 190 aa11.87□□□□□ -0.51
PPFIA3-213ENST00000602905 C16orf92Q96LL3 132 aa11.87□□□□□ -0.51
PPFIA3-213ENST00000602905 LINC00052Q96N35 136 aa11.87□□□□□ -0.51
PPFIA3-213ENST00000602905 AQP10Q96PS8 301 aa11.87□□□□□ -0.51
PPFIA3-213ENST00000602905 UBE2CO00762 179 aa11.86□□□□□ -0.51
PPFIA3-213ENST00000602905 ISLRO14498 428 aa11.86□□□□□ -0.51
PPFIA3-213ENST00000602905 ZNF266Q14584 549 aa11.86□□□□□ -0.51
PPFIA3-213ENST00000602905 ZNF124Q15973 351 aa11.86□□□□□ -0.51
PPFIA3-213ENST00000602905 BPIFA4PQ86YQ2 179 aa11.86□□□□□ -0.51
PPFIA3-213ENST00000602905 LRRC20Q8TCA0 184 aa11.86□□□□□ -0.51
PPFIA3-213ENST00000602905 TM2D3Q9BRN9 247 aa11.86□□□□□ -0.51
PPFIA3-213ENST00000602905 PARD6GQ9BYG4 376 aaPredicted RBP11.86□□□□□ -0.51
PPFIA3-213ENST00000602905 AGRNO00468 2067 aa11.86□□□□□ -0.51
PPFIA3-213ENST00000602905 KIR2DL5BA0A0G2JN68 375 aa11.85□□□□□ -0.51
PPFIA3-213ENST00000602905 KIR2DL5BA0A0G2JPC4 375 aa11.85□□□□□ -0.51
PPFIA3-213ENST00000602905 Q5BKY6 102 aa11.85□□□□□ -0.51
PPFIA3-213ENST00000602905 KIR2DL5AQ8N109 375 aa11.85□□□□□ -0.51
PPFIA3-213ENST00000602905 KIR2DL5BQ8NHK3 375 aa11.85□□□□□ -0.51
PPFIA3-213ENST00000602905 RCHY1Q96PM5 261 aa11.85□□□□□ -0.51
PPFIA3-213ENST00000602905 ACTL10Q5JWF8 245 aa11.84□□□□□ -0.51
PPFIA3-213ENST00000602905 COL7A1Q02388 2944 aa11.83□□□□□ -0.51
PPFIA3-213ENST00000602905 A0A087X0K7 114 aa11.83□□□□□ -0.52
PPFIA3-213ENST00000602905 KNCNA6PVL3 124 aa11.83□□□□□ -0.52
PPFIA3-213ENST00000602905 FFAR4Q5NUL3 377 aa11.83□□□□□ -0.52
PPFIA3-213ENST00000602905 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.83□□□□□ -0.52
PPFIA3-213ENST00000602905 CSTL1Q9H114 145 aa11.83□□□□□ -0.52
PPFIA3-213ENST00000602905 RPRMQ9NS64 109 aa11.83□□□□□ -0.52
PPFIA3-213ENST00000602905 TNFSF18Q9UNG2 199 aa11.83□□□□□ -0.52
PPFIA3-213ENST00000602905 BORCS7-ASMTA0A0B4J1R7 106 aa11.82□□□□□ -0.52
PPFIA3-213ENST00000602905 SOCS3O14543 225 aa11.82□□□□□ -0.52
PPFIA3-213ENST00000602905 CXCL2P19875 107 aa11.82□□□□□ -0.52
PPFIA3-213ENST00000602905 FAM78BQ5VT40 261 aa11.82□□□□□ -0.52
PPFIA3-213ENST00000602905 EBLN2Q6P2I7 272 aa11.82□□□□□ -0.52
PPFIA3-213ENST00000602905 LCN15Q6UWW0 184 aa11.82□□□□□ -0.52
PPFIA3-213ENST00000602905 MRPL32Q9BYC8 188 aaKnown RBP11.82□□□□□ -0.52
PPFIA3-213ENST00000602905 WFDC1Q9HC57 220 aa11.82□□□□□ -0.52
PPFIA3-213ENST00000602905 SPP1P10451 314 aa11.81□□□□□ -0.52
PPFIA3-213ENST00000602905 SPATA31B1PQ5VZV4 182 aa11.81□□□□□ -0.52
PPFIA3-213ENST00000602905 MORN3Q6PF18 240 aaPredicted RBP11.81□□□□□ -0.52
PPFIA3-213ENST00000602905 Q6ZWC4 215 aa11.81□□□□□ -0.52
PPFIA3-213ENST00000602905 SLC50A1Q9BRV3 221 aa11.81□□□□□ -0.52
PPFIA3-213ENST00000602905 TIMM9Q9Y5J7 89 aa11.81□□□□□ -0.52
PPFIA3-213ENST00000602905 DNAH9Q9NYC9 4486 aa11.81□□□□□ -0.52
PPFIA3-213ENST00000602905 TRAV5A0A0B4J249 113 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 ARPC5O15511 151 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 NUTF2P61970 127 aaKnown RBP11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 GUK1Q16774 197 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 ACOT6Q3I5F7 207 aaPredicted RBP11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 TMEM41BQ5BJD5 291 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 GCSAMLQ5JQS6 135 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 MORN5Q5VZ52 161 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 Q6ZNX1 250 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 FOXI2Q6ZQN5 318 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 TRPT1Q86TN4 253 aaKnown RBP11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 MFFQ9GZY8 342 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 HRH4Q9H3N8 390 aa11.8□□□□□ -0.52
PPFIA3-213ENST00000602905 RNF222A6NCQ9 220 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 SMLR1H3BR10 107 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 TAAR5O14804 337 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 MRPS12O15235 138 aaKnown RBP11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 CA1P00915 261 aaPredicted RBP11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 HLA-DRB4P13762 266 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 RHOBP62745 196 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 HSD17B11Q8NBQ5 300 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 ZNF738Q8NE65 137 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 SAV1Q9H4B6 383 aaPredicted RBP11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 RETNQ9HD89 108 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 CLEC5AQ9NY25 188 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 TMEM14CQ9P0S9 112 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 FUT9Q9Y231 359 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 TP53TG1Q9Y2A0 90 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 HLA-DRB4X5D2U9 266 aa11.79□□□□□ -0.52
PPFIA3-213ENST00000602905 H3BMM0 161 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms