RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 OR4D5Q8NGN0 318 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 OR1B1Q8NGR6 318 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 IGF2BP2-AS1Q96M15 143 aa9.33□□□□□ -0.92
RPS28-204ENST00000602140 SLC25A21Q9BQT8 299 aaPredicted RBP9.33□□□□□ -0.92
RPS28-204ENST00000602140 H3BP45 60 aa9.32□□□□□ -0.92
RPS28-204ENST00000602140 PRM2P04554 102 aa9.32□□□□□ -0.92
RPS28-204ENST00000602140 CNN1P51911 297 aaKnown RBP9.32□□□□□ -0.92
RPS28-204ENST00000602140 AKR1C1Q04828 323 aa9.32□□□□□ -0.92
RPS28-204ENST00000602140 RNF212Q495C1 297 aa9.32□□□□□ -0.92
RPS28-204ENST00000602140 IGFL4Q6B9Z1 124 aa9.32□□□□□ -0.92
RPS28-204ENST00000602140 Q6ZR54 194 aa9.32□□□□□ -0.92
RPS28-204ENST00000602140 TMEM147Q9BVK8 224 aa9.32□□□□□ -0.92
RPS28-204ENST00000602140 DYNC1H1Q14204 4646 aaKnown RBP9.32□□□□□ -0.92
RPS28-204ENST00000602140 ZNF705GA8MUZ8 300 aaPredicted RBP9.31□□□□□ -0.92
RPS28-204ENST00000602140 M0R2Z0 102 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 DUSP14O95147 198 aaKnown RBP9.31□□□□□ -0.92
RPS28-204ENST00000602140 S100A7P31151 101 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 FGL1Q08830 312 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 SPINK13Q1W4C9 94 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 ACOT7LQ6ZUV0 252 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 RNF182Q8N6D2 247 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 OR11H7Q8NGC8 314 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 GPR82Q96P67 336 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 STRAPQ9Y3F4 350 aaKnown RBP9.31□□□□□ -0.92
RPS28-204ENST00000602140 V9GYH0 126 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 DNAH11Q96DT5 4516 aa9.31□□□□□ -0.92
RPS28-204ENST00000602140 TRAV8-2A0A0B4J237 113 aa9.3□□□□□ -0.92
RPS28-204ENST00000602140 SMCO3A2RU48 225 aa9.3□□□□□ -0.92
RPS28-204ENST00000602140 CRXO43186 299 aaPredicted RBP9.3□□□□□ -0.92
RPS28-204ENST00000602140 TMEM144Q7Z5S9 345 aa9.3□□□□□ -0.92
RPS28-204ENST00000602140 SLC25A39Q9BZJ4 359 aaPredicted RBP9.3□□□□□ -0.92
RPS28-204ENST00000602140 H3BRN7 92 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 ADAP1O75689 374 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 INSP01308 110 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 IL5P05113 134 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 RAP2BP61225 183 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 SOHLH1Q5JUK2 328 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 CYP2G1PQ6ZSU1 146 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 BAP18Q8IXM2 172 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 C15orf53Q8NAA6 179 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 ZNF738Q8NE65 137 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 DEDD2Q8WXF8 326 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 PCLOQ9Y6V0 5065 aa9.29□□□□□ -0.92
RPS28-204ENST00000602140 TRAV12-2A0A075B6T6 113 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 LYRM9A8MSI8 78 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 DEFB130BP0DP73 79 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 DEFB130AP0DP74 79 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 RPL7P18124 248 aaKnown RBP9.28□□□□□ -0.92
RPS28-204ENST00000602140 B2MP61769 119 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 POLR2GP62487 172 aaKnown RBP eCLIP9.28□□□□□ -0.92
RPS28-204ENST00000602140 ID3Q02535 119 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 C1orf134Q5TEV5 83 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 SHANK2-AS3Q9BTD1 123 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 PSENENQ9NZ42 101 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 HIGD1AQ9Y241 93 aa9.28□□□□□ -0.92
RPS28-204ENST00000602140 C9orf170A2RU37 121 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 BOLA2-SMG1P6H3BVE0 249 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 HYPMO75409 117 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 OR5G3P0C626 314 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 LINC00869P0C866 280 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 AZU1P20160 251 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 TSPOP30536 169 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 S100A5P33763 92 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 UBE2MP61081 183 aaKnown RBP9.27□□□□□ -0.93
RPS28-204ENST00000602140 FCN2Q15485 313 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 UHRF2Q96PU4 802 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 ATG101Q9BSB4 218 aa9.27□□□□□ -0.93
RPS28-204ENST00000602140 PMS2P5A8MQ11 134 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 SSSCA1O60232 199 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 CCNKO75909 580 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 PRB4P10163 310 aaPredicted RBP9.26□□□□□ -0.93
RPS28-204ENST00000602140 FAM3BP58499 235 aaPredicted RBP9.26□□□□□ -0.93
RPS28-204ENST00000602140 PLP1P60201 277 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 RRAS2P62070 204 aaPredicted RBP9.26□□□□□ -0.93
RPS28-204ENST00000602140 RHOBP62745 196 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 HIST1H1AQ02539 215 aaPredicted RBP9.26□□□□□ -0.93
RPS28-204ENST00000602140 CCDC190Q86UF4 302 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 ZNF575Q86XF7 245 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 OR8A1Q8NGG7 326 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 LINC01587Q99440 93 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 PPP1R14DQ9NXH3 145 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 NACAE9PAV3 2078 aa9.26□□□□□ -0.93
RPS28-204ENST00000602140 PLAC8L1A1L4L8 177 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 CCDC160A6NGH7 325 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 F5H768 121 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 HTN1P15515 57 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 CXCL3P19876 107 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 SELENOTP62341 195 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 PSG3Q16557 428 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
RPS28-204ENST00000602140 LRRC20Q8TCA0 184 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 SMIM8Q96KF7 97 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 FLVCR2Q9UPI3 526 aa9.25□□□□□ -0.93
RPS28-204ENST00000602140 A0A087X0K7 114 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 NDUFB6O95139 128 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 NUDT3O95989 172 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 ATP5G1P05496 136 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 METTL15P1P0C7V9 234 aa9.24□□□□□ -0.93
RPS28-204ENST00000602140 ATP5G3P48201 142 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms