RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 YTHDF2Q9Y5A9 579 aaKnown RBP13.83□□□□□ -0.2
VRK3-225ENST00000601912 ZNF320A2RRD8 509 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 CLPSL1A2RUU4 121 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 PDE6DO43924 150 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 RPL7P18124 248 aaKnown RBP13.82□□□□□ -0.2
VRK3-225ENST00000601912 CRYBB3P26998 211 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 CEBPGP53567 150 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 SOHLH1Q5JUK2 328 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 GPHB5Q86YW7 130 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 OR8I2Q8N0Y5 310 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 CYB561D1Q8N8Q1 229 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 WIPF2Q8TF74 440 aaPredicted RBP13.82□□□□□ -0.2
VRK3-225ENST00000601912 WFDC12Q8WWY7 111 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 TMEM250H0YL14 139 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 ATP5G3P48201 142 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 TCTEX1D4Q5JR98 221 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 BLNKQ8WV28 456 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 TMEM190Q8WZ59 177 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 RNF114Q9Y508 228 aa13.82□□□□□ -0.2
VRK3-225ENST00000601912 F6UZH7 168 aa13.81□□□□□ -0.2
VRK3-225ENST00000601912 HAX1O00165 279 aa13.81□□□□□ -0.2
VRK3-225ENST00000601912 ZNF207O43670 478 aaKnown RBP13.81□□□□□ -0.2
VRK3-225ENST00000601912 BUB3O43684 328 aa13.81□□□□□ -0.2
VRK3-225ENST00000601912 C1orf194Q5T5A4 169 aa13.81□□□□□ -0.2
VRK3-225ENST00000601912 UNQ9165/PRO28630Q6UXU0 137 aa13.81□□□□□ -0.2
VRK3-225ENST00000601912 C4orf3Q8WVX3 66 aa13.81□□□□□ -0.2
VRK3-225ENST00000601912 GPR82Q96P67 336 aa13.81□□□□□ -0.2
VRK3-225ENST00000601912 APOC3P02656 99 aa13.8□□□□□ -0.2
VRK3-225ENST00000601912 ADCYAP1P18509 176 aa13.8□□□□□ -0.2
VRK3-225ENST00000601912 C10orf91Q5T1B1 145 aa13.8□□□□□ -0.2
VRK3-225ENST00000601912 CARHSP1Q9Y2V2 147 aaKnown RBP13.8□□□□□ -0.2
VRK3-225ENST00000601912 NF1P21359 2839 aa13.8□□□□□ -0.2
VRK3-225ENST00000601912 SNRPCP09234 159 aaKnown RBP13.79□□□□□ -0.2
VRK3-225ENST00000601912 SUMO1P63165 101 aaKnown RBP13.79□□□□□ -0.2
VRK3-225ENST00000601912 DAZ1Q9NQZ3 744 aaKnown RBP13.79□□□□□ -0.2
VRK3-225ENST00000601912 U3KQE9 123 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 IGHV4OR15-8A0A075B7B6 117 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 A0A087WW49 117 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 A0A1W2PS18 150 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 H3BQ15 152 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 K7EMT4 169 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 MRPS12O15235 138 aaKnown RBP13.79□□□□□ -0.2
VRK3-225ENST00000601912 IGLC2P0DOY2 106 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 RANP62826 216 aaKnown RBP13.79□□□□□ -0.2
VRK3-225ENST00000601912 GRAMD2BQ96HH9 432 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 ZNF586Q9NXT0 402 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 UFC1Q9Y3C8 167 aa13.79□□□□□ -0.2
VRK3-225ENST00000601912 GALR1P47211 349 aa13.78□□□□□ -0.2
VRK3-225ENST00000601912 CCDC28AQ8IWP9 274 aa13.78□□□□□ -0.2
VRK3-225ENST00000601912 KLHL30-AS1Q8NEE0 82 aa13.78□□□□□ -0.2
VRK3-225ENST00000601912 TRBV19A0A075B6N1 114 aa13.77□□□□□ -0.21
VRK3-225ENST00000601912 IGHV3-66A0A0C4DH42 116 aa13.77□□□□□ -0.21
VRK3-225ENST00000601912 GGTLC3B5MD39 225 aa13.77□□□□□ -0.21
VRK3-225ENST00000601912 CD28P10747 220 aa13.77□□□□□ -0.21
VRK3-225ENST00000601912 ATF4P18848 351 aaPredicted RBP13.77□□□□□ -0.21
VRK3-225ENST00000601912 SVBPQ8N300 66 aa13.77□□□□□ -0.21
VRK3-225ENST00000601912 DPF1Q92782 380 aa13.77□□□□□ -0.21
VRK3-225ENST00000601912 CUBNO60494 3623 aa13.77□□□□□ -0.21
VRK3-225ENST00000601912 IGHV3OR16-13A0A075B7E8 117 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 IGHV3-49A0A0A0MS15 119 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 IGHV3-74A0A0B4J1X5 117 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 LINC01619G3V211 115 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 H3BTX0 84 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 APOHP02749 345 aaPredicted RBP13.76□□□□□ -0.21
VRK3-225ENST00000601912 HOXD3P31249 432 aaPredicted RBP13.76□□□□□ -0.21
VRK3-225ENST00000601912 PROK1P58294 105 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 PDE6HQ13956 83 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 FAM90A2PQ658T7 463 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 C18orf65Q6ZTR6 163 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 C11orf44Q8N8P7 122 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 RPUSD4Q96CM3 377 aaKnown RBP13.76□□□□□ -0.21
VRK3-225ENST00000601912 TCEAL7Q9BRU2 100 aa13.76□□□□□ -0.21
VRK3-225ENST00000601912 TSSC4Q9Y5U2 329 aaPredicted RBP13.76□□□□□ -0.21
VRK3-225ENST00000601912 A0A1B0GUS0 222 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 ZNF785A8K8V0 405 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 LGALS9O00182 355 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 BMI1P35226 326 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 SRSF2Q01130 221 aaKnown RBP13.75□□□□□ -0.21
VRK3-225ENST00000601912 FAM74A3Q4VXF1 159 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 TM4SF20Q53R12 229 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 REC114Q7Z4M0 266 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 LYPD1Q8N2G4 141 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 OR11H1Q8NG94 326 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 OR1N2Q8NGR9 330 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 Q9H3A6 140 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 SCO2A0A1W2PP80 73 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 PGPA6NDG6 321 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 ZNF727A8MUV8 499 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 NDUFB4O95168 129 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 ZNF674Q2M3X9 581 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 DEFB136Q30KP8 78 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 C16orf54Q6UWD8 224 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 C1QL4Q86Z23 238 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 NIPSNAP3BQ9BS92 247 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 ELOVL1Q9BW60 279 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 OTORQ9NRC9 128 aa13.75□□□□□ -0.21
VRK3-225ENST00000601912 MYCNOSP40205 109 aa13.74□□□□□ -0.21
VRK3-225ENST00000601912 MEOX2P50222 304 aa13.74□□□□□ -0.21
VRK3-225ENST00000601912 SYNJ2BPP57105 145 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms