RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	EXOC3-AS1	Q8N2X6	119 aa		13.21	□□□□□ -0.29
CAPN12-211	ENST00000601685	C8orf31	Q8N9H6	132 aa		13.21	□□□□□ -0.29
CAPN12-211	ENST00000601685	DEFB124	Q8NES8	71 aa		13.21	□□□□□ -0.29
CAPN12-211	ENST00000601685	PRSS3P2	Q8NHM4	247 aa		13.21	□□□□□ -0.29
CAPN12-211	ENST00000601685	EP300	Q09472	2414 aa	Predicted RBP	13.21	□□□□□ -0.29
CAPN12-211	ENST00000601685	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.21	□□□□□ -0.3
CAPN12-211	ENST00000601685	PPIAL4D	F5H284	164 aa		13.21	□□□□□ -0.3
CAPN12-211	ENST00000601685	UFSP1	Q6NVU6	142 aa		13.21	□□□□□ -0.3
CAPN12-211	ENST00000601685	CACNA1H	O95180	2353 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	MC5R	P33032	325 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	LGALS7	P47929	136 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	ZADH2	Q8N4Q0	377 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	ZC2HC1A	Q96GY0	325 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	NAV3	Q8IVL0	2385 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685		A0A1B0GW15	77 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	FTH1P19	P0C7X4	201 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	PAX2	Q02962	417 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	C22orf34	Q6ZV56	151 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	FAM215A	Q9Y5M1	114 aa		13.2	□□□□□ -0.3
CAPN12-211	ENST00000601685	ARFGEF3	Q5TH69	2177 aa		13.19	□□□□□ -0.3
CAPN12-211	ENST00000601685	RPL27A	P46776	148 aa	Known RBP	13.19	□□□□□ -0.3
CAPN12-211	ENST00000601685	CCL8	P80075	99 aa		13.19	□□□□□ -0.3
CAPN12-211	ENST00000601685	CNOT1	A5YKK6	2376 aa	Known RBP	13.19	□□□□□ -0.3
CAPN12-211	ENST00000601685		H3BRM9	83 aa		13.19	□□□□□ -0.3
CAPN12-211	ENST00000601685	LYZ	P61626	148 aa		13.19	□□□□□ -0.3
CAPN12-211	ENST00000601685	PIP4P2	Q8N4L2	257 aa		13.19	□□□□□ -0.3
CAPN12-211	ENST00000601685	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.19	□□□□□ -0.3
CAPN12-211	ENST00000601685	MEGF9	Q9H1U4	602 aa		13.19	□□□□□ -0.3
CAPN12-211	ENST00000601685		A0A096LNJ9	63 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	C9orf118	A6NHY6	69 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	ENSA	O43768	121 aa	Known RBP	13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	APELA	P0DMC3	54 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	TNFRSF1A	P19438	455 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	GTF2H5	Q6ZYL4	71 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	OR1N2	Q8NGR9	330 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	RABAC1	Q9UI14	185 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	KLK10	O43240	276 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	UQCRFS1	P47985	274 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	TMEM75	Q8N9X5	138 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	FER1L6-AS1	Q8NA97	138 aa		13.18	□□□□□ -0.3
CAPN12-211	ENST00000601685	SAP30	O75446	220 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	FAM106CP	P0CH98	169 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	IFI27	P40305	119 aa	Predicted RBP	13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	FAM106A	Q4KMX7	169 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	DMXL1	Q9Y485	3027 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	IGHV3-72	A0A0B4J1Y9	119 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685		A6NDN8	102 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	APOBEC3A	P31941	199 aa	Predicted RBP	13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	FAM27E3	Q08E93	113 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	PIP4P1	Q86T03	277 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	BOD1L2	Q8IYS8	172 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	OR8A1	Q8NGG7	326 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	AP1S3	Q96PC3	154 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	JMJD8	Q96S16	334 aa		13.17	□□□□□ -0.3
CAPN12-211	ENST00000601685	CD40	P25942	277 aa		13.16	□□□□□ -0.3
CAPN12-211	ENST00000601685	LGALS9B	Q3B8N2	356 aa		13.16	□□□□□ -0.3
CAPN12-211	ENST00000601685	LGALS9C	Q6DKI2	356 aa		13.16	□□□□□ -0.3
CAPN12-211	ENST00000601685	ZNF493	Q6ZR52	646 aa		13.16	□□□□□ -0.3
CAPN12-211	ENST00000601685	CRYGB	P07316	175 aa		13.16	□□□□□ -0.3
CAPN12-211	ENST00000601685	LOXL1	Q08397	574 aa	Predicted RBP	13.16	□□□□□ -0.3
CAPN12-211	ENST00000601685		Q6AWC8	147 aa		13.16	□□□□□ -0.3
CAPN12-211	ENST00000601685	TMEM190	Q8WZ59	177 aa		13.16	□□□□□ -0.3
CAPN12-211	ENST00000601685	F11R	Q9Y624	299 aa	Known RBP	13.16	□□□□□ -0.3
CAPN12-211	ENST00000601685	CRIP1	P50238	77 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	ASCL2	Q99929	193 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	PSG8	Q9UQ74	426 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	ROS1	P08922	2347 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	MGA	Q8IWI9	3026 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	TRBV19	A0A075B6N1	114 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	PPIAL4E	A0A075B759	164 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	PPIAL4F	P0DN26	164 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	DLX6	P56179	175 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	NHLH1	Q02575	133 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	NUP37	Q8NFH4	326 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	NGB	Q9NPG2	151 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	SIGLEC8	Q9NYZ4	499 aa		13.15	□□□□□ -0.3
CAPN12-211	ENST00000601685	MAP1B	P46821	2468 aa	Known RBP	13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685		H3BUT2	72 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685		K7EP34	96 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	NDUFB3	O43676	98 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	CNTFR	P26992	372 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	HSD52	Q0P140	79 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	LYPD2	Q6UXB3	125 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685		U3KQK5	164 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	DCHS1	Q96JQ0	3298 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	CEP250	Q9BV73	2442 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	C17orf100	A8MU93	164 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	SMAD7	O15105	426 aa	Known RBP	13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	CEACAM4	O75871	244 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	PSG3	Q16557	428 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	OR9G4	Q8NGQ1	327 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	C17orf77	Q96MU5	243 aa		13.14	□□□□□ -0.31
CAPN12-211	ENST00000601685	LOC389332	A0A1B0GUA5	103 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685		D6R8Y8	96 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685		K7EQM0	130 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	SIVA1	O15304	175 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	RBPJ	Q06330	500 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	KIR3DS1	Q14943	382 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	SIGLEC15	Q6ZMC9	328 aa		13.13	□□□□□ -0.31
CAPN12-211	ENST00000601685	TPPP3	Q9BW30	176 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms