RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 OR4B1Q8NGF8 309 aa16.27■□□□□ 0.2
SSBP4-209ENST00000601357 SLC35B3Q9H1N7 401 aa16.27■□□□□ 0.2
SSBP4-209ENST00000601357 SMIM9A6NGZ8 99 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 K7EPK0 472 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 SCGB1D2O95969 90 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 SELENOTP62341 195 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 PRR20EP86478 221 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 PRR20CP86479 221 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 PRR20DP86480 221 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 PRR20BP86481 221 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 PRR20AP86496 221 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 PSG9Q00887 426 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 SHANK2-AS3Q9BTD1 123 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 SLC25A39Q9BZJ4 359 aaPredicted RBP16.26■□□□□ 0.19
SSBP4-209ENST00000601357 NPVFQ9HCQ7 196 aa16.26■□□□□ 0.19
SSBP4-209ENST00000601357 MBPP02686 304 aaPredicted RBP16.25■□□□□ 0.19
SSBP4-209ENST00000601357 TCRBP04435 133 aa16.25■□□□□ 0.19
SSBP4-209ENST00000601357 LINC00869P0C866 280 aa16.25■□□□□ 0.19
SSBP4-209ENST00000601357 RRAS2P62070 204 aaPredicted RBP16.25■□□□□ 0.19
SSBP4-209ENST00000601357 GSKIPQ9P0R6 139 aa16.25■□□□□ 0.19
SSBP4-209ENST00000601357 DOK5Q9P104 306 aa16.25■□□□□ 0.19
SSBP4-209ENST00000601357 DNAH6Q9C0G6 4158 aa16.25■□□□□ 0.19
SSBP4-209ENST00000601357 TRAV8-2A0A0B4J237 113 aa16.24■□□□□ 0.19
SSBP4-209ENST00000601357 C7orf66A4D0T2 115 aa16.24■□□□□ 0.19
SSBP4-209ENST00000601357 AMTNQ6UX39 209 aa16.24■□□□□ 0.19
SSBP4-209ENST00000601357 OR10P1Q8NGE3 313 aa16.24■□□□□ 0.19
SSBP4-209ENST00000601357 HIGD1AQ9Y241 93 aa16.24■□□□□ 0.19
SSBP4-209ENST00000601357 IGHV4-4A0A075B6R2 117 aa16.23■□□□□ 0.19
SSBP4-209ENST00000601357 HYPMO75409 117 aa16.23■□□□□ 0.19
SSBP4-209ENST00000601357 RAP2BP61225 183 aa16.23■□□□□ 0.19
SSBP4-209ENST00000601357 ARL16Q0P5N6 197 aa16.23■□□□□ 0.19
SSBP4-209ENST00000601357 TEPPQ6URK8 271 aa16.23■□□□□ 0.19
SSBP4-209ENST00000601357 ZNF767PQ75MW2 155 aa16.23■□□□□ 0.19
SSBP4-209ENST00000601357 RNF126Q9BV68 326 aa16.23■□□□□ 0.19
SSBP4-209ENST00000601357 TMEM189A5PLL7 270 aa16.22■□□□□ 0.19
SSBP4-209ENST00000601357 CCSO14618 274 aa16.22■□□□□ 0.19
SSBP4-209ENST00000601357 PATE2Q6UY27 113 aa16.22■□□□□ 0.19
SSBP4-209ENST00000601357 C1orf158Q8N1D5 194 aa16.22■□□□□ 0.19
SSBP4-209ENST00000601357 UHRF2Q96PU4 802 aa16.22■□□□□ 0.19
SSBP4-209ENST00000601357 GGACTQ9BVM4 153 aa16.22■□□□□ 0.19
SSBP4-209ENST00000601357 NUDT15Q9NV35 164 aa16.22■□□□□ 0.19
SSBP4-209ENST00000601357 MGAT4CQ9UBM8 478 aa16.22■□□□□ 0.19
SSBP4-209ENST00000601357 RFNGQ9Y644 331 aa16.22■□□□□ 0.19
SSBP4-209ENST00000601357 IGHV3OR16-12A0A075B7B8 117 aa16.21■□□□□ 0.19
SSBP4-209ENST00000601357 DEFB131BA0A096LNP1 70 aa16.21■□□□□ 0.19
SSBP4-209ENST00000601357 RPL7P18124 248 aaKnown RBP16.21■□□□□ 0.19
SSBP4-209ENST00000601357 IGFL4Q6B9Z1 124 aa16.21■□□□□ 0.19
SSBP4-209ENST00000601357 RNF182Q8N6D2 247 aa16.21■□□□□ 0.19
SSBP4-209ENST00000601357 CCDC32Q9BV29 185 aa16.21■□□□□ 0.19
SSBP4-209ENST00000601357 DNAH10Q8IVF4 4471 aa16.2■□□□□ 0.18
SSBP4-209ENST00000601357 TRAV6A0A075B6T7 132 aa16.2■□□□□ 0.18
SSBP4-209ENST00000601357 A0A087X0K7 114 aa16.2■□□□□ 0.18
SSBP4-209ENST00000601357 AMBPP02760 352 aa16.2■□□□□ 0.18
SSBP4-209ENST00000601357 OR5G3P0C626 314 aa16.2■□□□□ 0.18
SSBP4-209ENST00000601357 SLC38A11Q08AI6 406 aa16.2■□□□□ 0.18
SSBP4-209ENST00000601357 ZNF431Q8TF32 576 aaPredicted RBP16.2■□□□□ 0.18
SSBP4-209ENST00000601357 GOLT1BQ9Y3E0 138 aa16.2■□□□□ 0.18
SSBP4-209ENST00000601357 SPART-AS1P0CW21 52 aa16.19■□□□□ 0.18
SSBP4-209ENST00000601357 CNN1P51911 297 aaKnown RBP16.19■□□□□ 0.18
SSBP4-209ENST00000601357 LINC00299Q6ZSB3 139 aa16.19■□□□□ 0.18
SSBP4-209ENST00000601357 SEC22CQ9BRL7 303 aa16.19■□□□□ 0.18
SSBP4-209ENST00000601357 ARL6Q9H0F7 186 aa16.19■□□□□ 0.18
SSBP4-209ENST00000601357 C11orf1Q9H5F2 150 aa16.19■□□□□ 0.18
SSBP4-209ENST00000601357 MRPS12O15235 138 aaKnown RBP16.18■□□□□ 0.18
SSBP4-209ENST00000601357 EMP1P54849 157 aa16.18■□□□□ 0.18
SSBP4-209ENST00000601357 ZNF846Q147U1 533 aa16.18■□□□□ 0.18
SSBP4-209ENST00000601357 PXDC1Q5TGL8 231 aa16.18■□□□□ 0.18
SSBP4-209ENST00000601357 S100A7AQ86SG5 101 aa16.18■□□□□ 0.18
SSBP4-209ENST00000601357 ZNF546Q86UE3 836 aa16.18■□□□□ 0.18
SSBP4-209ENST00000601357 IGF2BP2-AS1Q96M15 143 aa16.18■□□□□ 0.18
SSBP4-209ENST00000601357 ARV1Q9H2C2 271 aa16.18■□□□□ 0.18
SSBP4-209ENST00000601357 DKK2Q9UBU2 259 aa16.18■□□□□ 0.18
SSBP4-209ENST00000601357 AGPAT2O15120 278 aa16.17■□□□□ 0.18
SSBP4-209ENST00000601357 DUSP14O95147 198 aaKnown RBP16.17■□□□□ 0.18
SSBP4-209ENST00000601357 FGL1Q08830 312 aa16.17■□□□□ 0.18
SSBP4-209ENST00000601357 OR11H7Q8NGC8 314 aa16.17■□□□□ 0.18
SSBP4-209ENST00000601357 CRXO43186 299 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-209ENST00000601357 CXCL3P19876 107 aa16.16■□□□□ 0.18
SSBP4-209ENST00000601357 C12orf45Q8N5I9 185 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-209ENST00000601357 MGST2Q99735 147 aa16.16■□□□□ 0.18
SSBP4-209ENST00000601357 TEX48A0A1B0GUV7 120 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 FAM25EA8MYX2 175 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 L7N2F9 121 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 GOSR2O14653 212 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 HBE1P02100 147 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 H2AFB2P0C5Z0 115 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 VAMP2P63027 116 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 FAM222AQ5U5X8 452 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 ZNF738Q8NE65 137 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 C2orf50Q96LR7 162 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 RNF24Q9Y225 148 aa16.15■□□□□ 0.18
SSBP4-209ENST00000601357 LSM5Q9Y4Y9 91 aaKnown RBP16.15■□□□□ 0.18
SSBP4-209ENST00000601357 LOC102723971A0A1B0GUV8 181 aa16.14■□□□□ 0.17
SSBP4-209ENST00000601357 C5orf51A6NDU8 294 aa16.14■□□□□ 0.17
SSBP4-209ENST00000601357 M0R2Z0 102 aa16.14■□□□□ 0.17
SSBP4-209ENST00000601357 IL15RAQ13261 267 aa16.14■□□□□ 0.17
SSBP4-209ENST00000601357 SPINK13Q1W4C9 94 aa16.14■□□□□ 0.17
SSBP4-209ENST00000601357 LINC00305Q7Z4B0 112 aa16.14■□□□□ 0.17
SSBP4-209ENST00000601357 OXA1LQ15070 435 aa16.13■□□□□ 0.17
SSBP4-209ENST00000601357 RRN3P1Q2M238 152 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms