RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 HTN1P15515 57 aa11.6□□□□□ -0.55
USE1-208ENST00000600970 ZNF182P17025 639 aaPredicted RBP11.6□□□□□ -0.55
USE1-208ENST00000600970 TAS2R60P59551 318 aa11.6□□□□□ -0.55
USE1-208ENST00000600970 LYZL2Q7Z4W2 148 aa11.6□□□□□ -0.55
USE1-208ENST00000600970 TMEM256Q8N2U0 113 aa11.6□□□□□ -0.55
USE1-208ENST00000600970 OR1B1Q8NGR6 318 aa11.6□□□□□ -0.55
USE1-208ENST00000600970 GNPNAT1Q96EK6 184 aaPredicted RBP11.6□□□□□ -0.55
USE1-208ENST00000600970 VCX3AQ9NNX9 186 aa11.6□□□□□ -0.55
USE1-208ENST00000600970 KCNIP3Q9Y2W7 256 aa11.6□□□□□ -0.55
USE1-208ENST00000600970 TRAV26-1A0A087WT03 109 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 DISC1C4P0D8 188 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 OR5I1Q13606 314 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 ESRGQ1W209 222 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 GGNBP1Q5YKI7 109 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 LYPD1Q8N2G4 141 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 ZNF738Q8NE65 137 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 RXFP4Q8TDU9 374 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 C15orf40Q8WUR7 153 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 ZNF503Q96F45 646 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 NOP10Q9NPE3 64 aaKnown RBP11.59□□□□□ -0.55
USE1-208ENST00000600970 ZNF586Q9NXT0 402 aa11.59□□□□□ -0.55
USE1-208ENST00000600970 A0A087WXM4 84 aa11.58□□□□□ -0.56
USE1-208ENST00000600970 A0A0B4J2A0 478 aa11.58□□□□□ -0.56
USE1-208ENST00000600970 ORM2P19652 201 aa11.58□□□□□ -0.56
USE1-208ENST00000600970 XGP55808 180 aa11.58□□□□□ -0.56
USE1-208ENST00000600970 RAB11AP62491 216 aa11.58□□□□□ -0.56
USE1-208ENST00000600970 SSBP1Q04837 148 aaKnown RBP11.58□□□□□ -0.56
USE1-208ENST00000600970 FGL1Q08830 312 aa11.58□□□□□ -0.56
USE1-208ENST00000600970 TMEM182Q6ZP80 229 aaPredicted RBP11.58□□□□□ -0.56
USE1-208ENST00000600970 TMEM144Q7Z5S9 345 aa11.58□□□□□ -0.56
USE1-208ENST00000600970 RNASE8Q8TDE3 154 aaKnown RBP11.58□□□□□ -0.56
USE1-208ENST00000600970 GPR82Q96P67 336 aa11.58□□□□□ -0.56
USE1-208ENST00000600970 SHPKQ9UHJ6 478 aa11.58□□□□□ -0.56
USE1-208ENST00000600970 A0A0J9YY99 117 aa11.57□□□□□ -0.56
USE1-208ENST00000600970 M6PRP20645 277 aa11.57□□□□□ -0.56
USE1-208ENST00000600970 GATA2P23769 480 aaPredicted RBP11.57□□□□□ -0.56
USE1-208ENST00000600970 RHOBP62745 196 aa11.57□□□□□ -0.56
USE1-208ENST00000600970 OR10J6PQ8NGY7 276 aa11.57□□□□□ -0.56
USE1-208ENST00000600970 OR1S1Q8NH92 325 aa11.57□□□□□ -0.56
USE1-208ENST00000600970 AP3S1Q92572 193 aa11.57□□□□□ -0.56
USE1-208ENST00000600970 MRPS16Q9Y3D3 137 aaKnown RBP11.57□□□□□ -0.56
USE1-208ENST00000600970 ZNF701M0R085 212 aaPredicted RBP11.56□□□□□ -0.56
USE1-208ENST00000600970 AKAIN1P0CW23 69 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 IAPPP10997 89 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 AKR1C4P17516 323 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 FUSP35637 526 aaKnown RBP eCLIP11.56□□□□□ -0.56
USE1-208ENST00000600970 LINC00315P59091 139 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 HIST1H1AQ02539 215 aaPredicted RBP11.56□□□□□ -0.56
USE1-208ENST00000600970 ZNF493Q6ZR52 646 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 Q6ZRN7 208 aaPredicted RBP11.56□□□□□ -0.56
USE1-208ENST00000600970 LINC00612Q8N6U2 182 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 BPIFCQ8NFQ6 507 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 OR8A1Q8NGG7 326 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 OR51S1Q8NGJ8 323 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 TMEM263Q8WUH6 116 aaKnown RBP11.56□□□□□ -0.56
USE1-208ENST00000600970 TMEM147Q9BVK8 224 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 PGPEP1Q9NXJ5 209 aa11.56□□□□□ -0.56
USE1-208ENST00000600970 PAIP2BQ9ULR5 123 aaKnown RBP11.56□□□□□ -0.56
USE1-208ENST00000600970 HOXA5P20719 270 aa11.55□□□□□ -0.56
USE1-208ENST00000600970 MRPS10P82664 201 aaKnown RBP11.55□□□□□ -0.56
USE1-208ENST00000600970 Q5VSD8 79 aa11.55□□□□□ -0.56
USE1-208ENST00000600970 PRRT1Q99946 306 aa11.55□□□□□ -0.56
USE1-208ENST00000600970 MIXL1Q9H2W2 232 aa11.55□□□□□ -0.56
USE1-208ENST00000600970 PPP1R14DQ9NXH3 145 aa11.55□□□□□ -0.56
USE1-208ENST00000600970 PRSS46E5RG02 174 aa11.54□□□□□ -0.56
USE1-208ENST00000600970 H3BRN7 92 aa11.54□□□□□ -0.56
USE1-208ENST00000600970 PITX3O75364 302 aa11.54□□□□□ -0.56
USE1-208ENST00000600970 PRB4P10163 310 aaPredicted RBP11.54□□□□□ -0.56
USE1-208ENST00000600970 S100A7P31151 101 aa11.54□□□□□ -0.56
USE1-208ENST00000600970 H3BNG1 76 aa11.53□□□□□ -0.56
USE1-208ENST00000600970 ADAP1O75689 374 aa11.53□□□□□ -0.56
USE1-208ENST00000600970 CDKN1BP46527 198 aa11.53□□□□□ -0.56
USE1-208ENST00000600970 CLVS1Q8IUQ0 354 aaPredicted RBP11.53□□□□□ -0.56
USE1-208ENST00000600970 SMIM4Q8WVI0 70 aa11.53□□□□□ -0.56
USE1-208ENST00000600970 PTTG2Q9NZH5 202 aa11.53□□□□□ -0.56
USE1-208ENST00000600970 GAGE12BA1L429 117 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 H7BYZ3 331 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 GAGE7O76087 117 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 GAGE12FP0CL80 117 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 GAGE12GP0CL81 117 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 GAGE12IP0CL82 117 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 CXCL3P19876 107 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 PSG3Q16557 428 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 FRZBQ92765 325 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 SHANK2-AS3Q9BTD1 123 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 NAA50Q9GZZ1 169 aaKnown RBP11.52□□□□□ -0.57
USE1-208ENST00000600970 MYCBP2O75592 4640 aa11.52□□□□□ -0.57
USE1-208ENST00000600970 VPS13BQ7Z7G8 4022 aa11.51□□□□□ -0.57
USE1-208ENST00000600970 ANXA3P12429 323 aa11.51□□□□□ -0.57
USE1-208ENST00000600970 RPL7P18124 248 aaKnown RBP11.51□□□□□ -0.57
USE1-208ENST00000600970 SRPXP78539 464 aa11.51□□□□□ -0.57
USE1-208ENST00000600970 KIR3DS1Q14943 382 aa11.51□□□□□ -0.57
USE1-208ENST00000600970 CTF1Q16619 201 aa11.51□□□□□ -0.57
USE1-208ENST00000600970 SCGB3A2Q96PL1 93 aa11.51□□□□□ -0.57
USE1-208ENST00000600970 DMBT1Q9UGM3 2413 aaPredicted RBP11.5□□□□□ -0.57
USE1-208ENST00000600970 A0A087X0K7 114 aa11.5□□□□□ -0.57
USE1-208ENST00000600970 ANKRD20A5PA0PJZ0 165 aa11.5□□□□□ -0.57
USE1-208ENST00000600970 RLN2P04090 185 aa11.5□□□□□ -0.57
USE1-208ENST00000600970 AKR1C1Q04828 323 aa11.5□□□□□ -0.57
USE1-208ENST00000600970 CDPF1Q6NVV7 123 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms