RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 TMUB2Q71RG4 321 aa12.57□□□□□ -0.4
USHBP1-210ENST00000600286 STXBP6Q8NFX7 210 aa12.57□□□□□ -0.4
USHBP1-210ENST00000600286 GLMPQ8WWB7 406 aa12.57□□□□□ -0.4
USHBP1-210ENST00000600286 PSMG3Q9BT73 122 aaPredicted RBP12.57□□□□□ -0.4
USHBP1-210ENST00000600286 ZNF471Q9BX82 626 aaPredicted RBP12.57□□□□□ -0.4
USHBP1-210ENST00000600286 TRAV2A0A0B4J234 112 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 BCL2L11O43521 198 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 ATF4P18848 351 aaPredicted RBP12.56□□□□□ -0.4
USHBP1-210ENST00000600286 ATP6V0CP27449 155 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 TFPI2P48307 235 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 FAM90A2PQ658T7 463 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 PATE2Q6UY27 113 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 BPIFA4PQ86YQ2 179 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 WFDC3Q8IUB2 231 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 GBGT1Q8N5D6 347 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 TMEM37Q8WXS4 190 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 UHRF2Q96PU4 802 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 MS4A6AQ9H2W1 248 aa12.56□□□□□ -0.4
USHBP1-210ENST00000600286 A0A1W2PPV4 95 aa12.55□□□□□ -0.4
USHBP1-210ENST00000600286 CXCL2P19875 107 aa12.55□□□□□ -0.4
USHBP1-210ENST00000600286 MEOX2P50222 304 aa12.55□□□□□ -0.4
USHBP1-210ENST00000600286 RHOBP62745 196 aa12.55□□□□□ -0.4
USHBP1-210ENST00000600286 FAM78BQ5VT40 261 aa12.55□□□□□ -0.4
USHBP1-210ENST00000600286 LRRC20Q8TCA0 184 aa12.55□□□□□ -0.4
USHBP1-210ENST00000600286 PRR25Q96S07 402 aa12.55□□□□□ -0.4
USHBP1-210ENST00000600286 SCRT1Q9BWW7 348 aa12.55□□□□□ -0.4
USHBP1-210ENST00000600286 MRPL32Q9BYC8 188 aaKnown RBP12.55□□□□□ -0.4
USHBP1-210ENST00000600286 NRN1Q9NPD7 142 aa12.55□□□□□ -0.4
USHBP1-210ENST00000600286 M6PRP20645 277 aa12.54□□□□□ -0.4
USHBP1-210ENST00000600286 ID1P41134 155 aa12.54□□□□□ -0.4
USHBP1-210ENST00000600286 CD81P60033 236 aa12.54□□□□□ -0.4
USHBP1-210ENST00000600286 LEMD1Q68G75 181 aa12.54□□□□□ -0.4
USHBP1-210ENST00000600286 OR2G3Q8NGZ4 309 aa12.54□□□□□ -0.4
USHBP1-210ENST00000600286 TAS2R45P59539 299 aa12.53□□□□□ -0.4
USHBP1-210ENST00000600286 SNRPD3P62318 126 aaKnown RBP12.53□□□□□ -0.4
USHBP1-210ENST00000600286 LGALSLQ3ZCW2 172 aaPredicted RBP12.53□□□□□ -0.4
USHBP1-210ENST00000600286 EIF5AL1Q6IS14 154 aaKnown RBP12.53□□□□□ -0.4
USHBP1-210ENST00000600286 OR10G4Q8NGN3 311 aa12.53□□□□□ -0.4
USHBP1-210ENST00000600286 OR10G9Q8NGN4 311 aa12.53□□□□□ -0.4
USHBP1-210ENST00000600286 OR10G7Q8NGN6 311 aa12.53□□□□□ -0.4
USHBP1-210ENST00000600286 SLC25A32Q9H2D1 315 aa12.53□□□□□ -0.4
USHBP1-210ENST00000600286 AURKAIP1Q9NWT8 199 aaPredicted RBP12.53□□□□□ -0.4
USHBP1-210ENST00000600286 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
USHBP1-210ENST00000600286 DEFB121Q5J5C9 76 aa12.52□□□□□ -0.41
USHBP1-210ENST00000600286 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
USHBP1-210ENST00000600286 SEPSECSQ9HD40 501 aaKnown RBP12.52□□□□□ -0.41
USHBP1-210ENST00000600286 CYTL1Q9NRR1 136 aa12.52□□□□□ -0.41
USHBP1-210ENST00000600286 FUT9Q9Y231 359 aa12.52□□□□□ -0.41
USHBP1-210ENST00000600286 OR11H12B2RN74 326 aa12.51□□□□□ -0.41
USHBP1-210ENST00000600286 CD300CQ08708 224 aa12.51□□□□□ -0.41
USHBP1-210ENST00000600286 GCSAMLQ5JQS6 135 aa12.51□□□□□ -0.41
USHBP1-210ENST00000600286 C16orf92Q96LL3 132 aa12.51□□□□□ -0.41
USHBP1-210ENST00000600286 TUBA4BQ9H853 241 aa12.51□□□□□ -0.41
USHBP1-210ENST00000600286 SORL1Q92673 2214 aa12.5□□□□□ -0.41
USHBP1-210ENST00000600286 K7EQG2 157 aa12.5□□□□□ -0.41
USHBP1-210ENST00000600286 PRB2P02812 416 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-210ENST00000600286 GUK1Q16774 197 aa12.5□□□□□ -0.41
USHBP1-210ENST00000600286 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
USHBP1-210ENST00000600286 BAP18Q8IXM2 172 aa12.5□□□□□ -0.41
USHBP1-210ENST00000600286 FAM110AQ9BQ89 295 aa12.5□□□□□ -0.41
USHBP1-210ENST00000600286 ACTR3CQ9C0K3 210 aaPredicted RBP12.5□□□□□ -0.41
USHBP1-210ENST00000600286 SMAD5-AS1Q9Y6J3 95 aa12.5□□□□□ -0.41
USHBP1-210ENST00000600286 TRAV5A0A0B4J249 113 aa12.49□□□□□ -0.41
USHBP1-210ENST00000600286 CD7P09564 240 aa12.49□□□□□ -0.41
USHBP1-210ENST00000600286 SEC11BP0C7V7 166 aa12.49□□□□□ -0.41
USHBP1-210ENST00000600286 KHDC3LQ587J8 217 aa12.49□□□□□ -0.41
USHBP1-210ENST00000600286 FAM122CQ6P4D5 195 aa12.49□□□□□ -0.41
USHBP1-210ENST00000600286 SLC51BQ86UW2 128 aa12.49□□□□□ -0.41
USHBP1-210ENST00000600286 MRAPQ8TCY5 172 aa12.49□□□□□ -0.41
USHBP1-210ENST00000600286 SH3BGRL3Q9H299 93 aa12.49□□□□□ -0.41
USHBP1-210ENST00000600286 TMEM14CQ9P0S9 112 aa12.49□□□□□ -0.41
USHBP1-210ENST00000600286 ISLRO14498 428 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 OR7C2O60412 319 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 SPP1P10451 314 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 CDC34P49427 236 aaPredicted RBP12.48□□□□□ -0.41
USHBP1-210ENST00000600286 RAB2AP61019 212 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 LCN15Q6UWW0 184 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 MIR17HGQ75NE6 70 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 DCANP1Q8TF63 244 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 PAXXQ9BUH6 204 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 OR51M1Q9H341 326 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 CLEC5AQ9NY25 188 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 RFNGQ9Y644 331 aa12.48□□□□□ -0.41
USHBP1-210ENST00000600286 A0A087X0K7 114 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 UMAD1C9J7I0 102 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 ZNF688P0C7X2 276 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 HIST1H1EP10412 219 aaKnown RBP12.47□□□□□ -0.41
USHBP1-210ENST00000600286 PSMB3P49720 205 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 Q8N1Y9 231 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 C9orf62Q8N4C0 152 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 STOML3Q8TAV4 291 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 LINC00052Q96N35 136 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 UBQLN2Q9UHD9 624 aa12.47□□□□□ -0.41
USHBP1-210ENST00000600286 DEFB131AP59861 70 aa12.46□□□□□ -0.41
USHBP1-210ENST00000600286 PSMG4Q5JS54 123 aa12.46□□□□□ -0.41
USHBP1-210ENST00000600286 MORN5Q5VZ52 161 aa12.46□□□□□ -0.41
USHBP1-210ENST00000600286 SPATA31B1PQ5VZV4 182 aa12.46□□□□□ -0.41
USHBP1-210ENST00000600286 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.46□□□□□ -0.41
USHBP1-210ENST00000600286 PQLC2Q6ZP29 291 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms