RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 TMEM252Q8N6L7 170 aa12.49□□□□□ -0.41
SSBP4-207ENST00000600244 IGSF23A1L1A6 192 aa12.48□□□□□ -0.41
SSBP4-207ENST00000600244 CLN5O75503 358 aa12.48□□□□□ -0.41
SSBP4-207ENST00000600244 P2RY1P47900 373 aa12.48□□□□□ -0.41
SSBP4-207ENST00000600244 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
SSBP4-207ENST00000600244 IGHV3-49A0A0A0MS15 119 aa12.47□□□□□ -0.41
SSBP4-207ENST00000600244 PET100P0DJ07 73 aa12.47□□□□□ -0.41
SSBP4-207ENST00000600244 NPBWR1P48145 328 aa12.47□□□□□ -0.41
SSBP4-207ENST00000600244 PAFAH1B2P68402 229 aa12.47□□□□□ -0.41
SSBP4-207ENST00000600244 GAMTQ14353 236 aa12.47□□□□□ -0.41
SSBP4-207ENST00000600244 FRZBQ92765 325 aa12.47□□□□□ -0.41
SSBP4-207ENST00000600244 CLEC5AQ9NY25 188 aa12.47□□□□□ -0.41
SSBP4-207ENST00000600244 MBD2Q9UBB5 411 aa12.47□□□□□ -0.41
SSBP4-207ENST00000600244 A0A1B0GVG6 124 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 FNDC10F2Z333 226 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 J3QL48 77 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 IGKV1-17P01599 117 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 IGLC1P0CG04 106 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 SULT1A1P50225 295 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 BCAP31P51572 246 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 CAV2P51636 162 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 RND2P52198 227 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 DLK1P80370 383 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 Q56UQ5 140 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 OR10P1Q8NGE3 313 aa12.46□□□□□ -0.41
SSBP4-207ENST00000600244 PAIP2BQ9ULR5 123 aaKnown RBP12.46□□□□□ -0.41
SSBP4-207ENST00000600244 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 GNG7O60262 68 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 CST7O76096 145 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 FGL1Q08830 312 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 OR8G2PQ6IF36 304 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 ACOT7LQ6ZUV0 252 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 TCF24Q7RTU0 167 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 UBAC2Q8NBM4 344 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 OR2T35Q8NGX2 323 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 ZNRF2Q8NHG8 242 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 NPIPB3Q92617 1050 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 GGACTQ9BVM4 153 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 MS4A6AQ9H2W1 248 aa12.45□□□□□ -0.42
SSBP4-207ENST00000600244 IGKV1OR2-108A0A075B7D4 117 aa12.44□□□□□ -0.42
SSBP4-207ENST00000600244 TRAV30A0A087WSZ9 112 aa12.44□□□□□ -0.42
SSBP4-207ENST00000600244 TRAV2A0A0B4J234 112 aa12.44□□□□□ -0.42
SSBP4-207ENST00000600244 NUPL2O15504 423 aaKnown RBP12.44□□□□□ -0.42
SSBP4-207ENST00000600244 SPART-AS1P0CW21 52 aa12.44□□□□□ -0.42
SSBP4-207ENST00000600244 THAP8Q8NA92 274 aa12.44□□□□□ -0.42
SSBP4-207ENST00000600244 THAP6Q8TBB0 222 aa12.44□□□□□ -0.42
SSBP4-207ENST00000600244 ST6GAL2Q96JF0 529 aa12.44□□□□□ -0.42
SSBP4-207ENST00000600244 SLC35E1Q96K37 410 aa12.44□□□□□ -0.42
SSBP4-207ENST00000600244 SLC25A31Q9H0C2 315 aa12.44□□□□□ -0.42
SSBP4-207ENST00000600244 IGHV3OR16-13A0A075B7E8 117 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 IGHV3-74A0A0B4J1X5 117 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 CD5P06127 495 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 NHLH2Q02577 135 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 BAXQ07812 192 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 VWC2Q2TAL6 325 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 TMEM144Q7Z5S9 345 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 LILRB2Q8N423 598 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 OR1S2Q8NGQ3 325 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 ACY3Q96HD9 319 aa12.43□□□□□ -0.42
SSBP4-207ENST00000600244 OR10J1P30954 320 aa12.42□□□□□ -0.42
SSBP4-207ENST00000600244 S100A11P31949 105 aa12.42□□□□□ -0.42
SSBP4-207ENST00000600244 YPEL3P61236 119 aaPredicted RBP12.42□□□□□ -0.42
SSBP4-207ENST00000600244 SLC38A11Q08AI6 406 aa12.42□□□□□ -0.42
SSBP4-207ENST00000600244 STX12Q86Y82 276 aa12.42□□□□□ -0.42
SSBP4-207ENST00000600244 hCG_2014768A0A024R1R8 64 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 KNCNA6PVL3 124 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 DNASE2O00115 360 aaPredicted RBP12.41□□□□□ -0.42
SSBP4-207ENST00000600244 BTF3P20290 206 aaKnown RBP12.41□□□□□ -0.42
SSBP4-207ENST00000600244 RPL12P30050 165 aaKnown RBP12.41□□□□□ -0.42
SSBP4-207ENST00000600244 RELQ04864 619 aaPredicted RBP12.41□□□□□ -0.42
SSBP4-207ENST00000600244 TIGITQ495A1 244 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 ZNF600Q6ZNG1 722 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 AQP10Q96PS8 301 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 TRGV9Q99603 122 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 ZFAND3Q9H8U3 227 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 NPVFQ9HCQ7 196 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 MDFICQ9P1T7 246 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 HSPB11Q9Y547 144 aa12.41□□□□□ -0.42
SSBP4-207ENST00000600244 HBG1P69891 147 aa12.4□□□□□ -0.42
SSBP4-207ENST00000600244 HBG2P69892 147 aa12.4□□□□□ -0.42
SSBP4-207ENST00000600244 ATP6V1FQ16864 119 aa12.4□□□□□ -0.42
SSBP4-207ENST00000600244 TMEM88Q6PEY1 159 aa12.4□□□□□ -0.42
SSBP4-207ENST00000600244 VSIRQ9H7M9 311 aa12.4□□□□□ -0.42
SSBP4-207ENST00000600244 RNF222A6NCQ9 220 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 SMLR1H3BR10 107 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 TOMM40O96008 361 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 TOMM20LQ6UXN7 152 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 TCTE3Q8IZS6 198 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 OR5C1Q8NGR4 320 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 ST8SIA2Q92186 375 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 TMEM147Q9BVK8 224 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 TNFSF18Q9UNG2 199 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 WDR83OSQ9Y284 106 aa12.39□□□□□ -0.43
SSBP4-207ENST00000600244 ZFP92A6NM28 416 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 SCGB2A1O75556 95 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 PSG1P11464 419 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 ZNF90Q03938 601 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 AKR1C1Q04828 323 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 SERTAD4-AS1Q5TG53 156 aa12.38□□□□□ -0.43
SSBP4-207ENST00000600244 ZNF546Q86UE3 836 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms