RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 CLEC5AQ9NY25 188 aa10.63□□□□□ -0.71
IRF3-223ENST00000599223 ELOA3CA0A087WX78 387 aaPredicted RBP10.62□□□□□ -0.71
IRF3-223ENST00000599223 ZNF705EA8MWA4 302 aaPredicted RBP10.62□□□□□ -0.71
IRF3-223ENST00000599223 IGLL5B9A064 214 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 CORTO00230 105 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 IAPPP10997 89 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 NPPCP23582 126 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 HLA-DMBP28068 263 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 ZNF266Q14584 549 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 NDUFA5Q16718 116 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 Q6ZTC4 211 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 ZNF680Q8NEM1 530 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 OR1S2Q8NGQ3 325 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 OR4X1Q8NH49 305 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 PHYHIPLQ96FC7 376 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 GRAMD2BQ96HH9 432 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 METTL26Q96S19 204 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 HRH4Q9H3N8 390 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 CELA1Q9UNI1 258 aa10.62□□□□□ -0.71
IRF3-223ENST00000599223 STRAPQ9Y3F4 350 aaKnown RBP10.62□□□□□ -0.71
IRF3-223ENST00000599223 DYNC1H1Q14204 4646 aaKnown RBP10.61□□□□□ -0.71
IRF3-223ENST00000599223 FAM24AA6NFZ4 105 aa10.61□□□□□ -0.71
IRF3-223ENST00000599223 SULT1A1P50225 295 aa10.61□□□□□ -0.71
IRF3-223ENST00000599223 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
IRF3-223ENST00000599223 ACTL10Q5JWF8 245 aa10.61□□□□□ -0.71
IRF3-223ENST00000599223 SPANXN5Q5MJ07 72 aa10.61□□□□□ -0.71
IRF3-223ENST00000599223 TMEM252Q8N6L7 170 aa10.61□□□□□ -0.71
IRF3-223ENST00000599223 CSNK1G2-AS1Q8NCQ2 148 aa10.61□□□□□ -0.71
IRF3-223ENST00000599223 STOML3Q8TAV4 291 aa10.61□□□□□ -0.71
IRF3-223ENST00000599223 TMEM231Q9H6L2 316 aa10.61□□□□□ -0.71
IRF3-223ENST00000599223 HEYLQ9NQ87 328 aaPredicted RBP10.61□□□□□ -0.71
IRF3-223ENST00000599223 IGLC1P0CG04 106 aa10.6□□□□□ -0.71
IRF3-223ENST00000599223 SPP1P10451 314 aa10.6□□□□□ -0.71
IRF3-223ENST00000599223 BAP18Q8IXM2 172 aa10.6□□□□□ -0.71
IRF3-223ENST00000599223 TMEM170AQ8WVE7 144 aa10.6□□□□□ -0.71
IRF3-223ENST00000599223 GLMPQ8WWB7 406 aa10.6□□□□□ -0.71
IRF3-223ENST00000599223 SCRT1Q9BWW7 348 aa10.6□□□□□ -0.71
IRF3-223ENST00000599223 SMIM3Q9BZL3 60 aa10.6□□□□□ -0.71
IRF3-223ENST00000599223 C11orf1Q9H5F2 150 aa10.6□□□□□ -0.71
IRF3-223ENST00000599223 U3KQE9 123 aa10.6□□□□□ -0.71
IRF3-223ENST00000599223 A0A1W2PS18 150 aa10.59□□□□□ -0.71
IRF3-223ENST00000599223 IGSF23A1L1A6 192 aa10.59□□□□□ -0.71
IRF3-223ENST00000599223 C11orf94C9JXX5 98 aa10.59□□□□□ -0.71
IRF3-223ENST00000599223 H3BP45 60 aa10.59□□□□□ -0.71
IRF3-223ENST00000599223 IFNA5P01569 189 aa10.59□□□□□ -0.71
IRF3-223ENST00000599223 MIFP14174 115 aa10.59□□□□□ -0.71
IRF3-223ENST00000599223 SUB1P53999 127 aaKnown RBP eCLIP10.59□□□□□ -0.71
IRF3-223ENST00000599223 TCTAP57738 103 aa10.59□□□□□ -0.71
IRF3-223ENST00000599223 RAB11AP62491 216 aa10.59□□□□□ -0.71
IRF3-223ENST00000599223 USF2Q15853 346 aaPredicted RBP10.59□□□□□ -0.71
IRF3-223ENST00000599223 MORN3Q6PF18 240 aaPredicted RBP10.59□□□□□ -0.71
IRF3-223ENST00000599223 DNAH11Q96DT5 4516 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 IGHV4-4A0A075B6R2 117 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 CST7O76096 145 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 IFNA10P01566 189 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 RND2P52198 227 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 PAX9P55771 341 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 ATP5IP56385 69 aaPredicted RBP10.58□□□□□ -0.72
IRF3-223ENST00000599223 NHLH2Q02577 135 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 ATP6V1FQ16864 119 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 PSMG4Q5JS54 123 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 OR5C1Q8NGR4 320 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 LRRC20Q8TCA0 184 aa10.58□□□□□ -0.72
IRF3-223ENST00000599223 PKD1P98161 4303 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 METTL15P1P0C7V9 234 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 HTR2BP41595 481 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 CLINT1Q14677 625 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 TMEM41BQ5BJD5 291 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 RPL7L1Q6DKI1 246 aaKnown RBP10.57□□□□□ -0.72
IRF3-223ENST00000599223 C16orf54Q6UWD8 224 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 ALKAL2Q6UX46 152 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 OR10P1Q8NGE3 313 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 SCGB1C1Q8TD33 95 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 ATP5SQ99766 215 aa10.57□□□□□ -0.72
IRF3-223ENST00000599223 TRAV10A0A0B4J240 114 aa10.56□□□□□ -0.72
IRF3-223ENST00000599223 HELTA6NFD8 242 aa10.56□□□□□ -0.72
IRF3-223ENST00000599223 OR10J1P30954 320 aa10.56□□□□□ -0.72
IRF3-223ENST00000599223 C12orf74Q32Q52 190 aa10.56□□□□□ -0.72
IRF3-223ENST00000599223 OR8G2PQ6IF36 304 aa10.56□□□□□ -0.72
IRF3-223ENST00000599223 TMEM14EPQ6UXP3 125 aa10.56□□□□□ -0.72
IRF3-223ENST00000599223 SLC24A4Q8NFF2 622 aa10.56□□□□□ -0.72
IRF3-223ENST00000599223 CYTL1Q9NRR1 136 aa10.56□□□□□ -0.72
IRF3-223ENST00000599223 CFDP00746 253 aaPredicted RBP10.55□□□□□ -0.72
IRF3-223ENST00000599223 AMBPP02760 352 aa10.55□□□□□ -0.72
IRF3-223ENST00000599223 DEFB1P60022 68 aa10.55□□□□□ -0.72
IRF3-223ENST00000599223 SLC38A11Q08AI6 406 aa10.55□□□□□ -0.72
IRF3-223ENST00000599223 C2orf83Q53S99 150 aa10.55□□□□□ -0.72
IRF3-223ENST00000599223 GNPNAT1Q96EK6 184 aaPredicted RBP10.55□□□□□ -0.72
IRF3-223ENST00000599223 NARS2Q96I59 477 aaKnown RBP10.55□□□□□ -0.72
IRF3-223ENST00000599223 SLC25A32Q9H2D1 315 aa10.55□□□□□ -0.72
IRF3-223ENST00000599223 RYR1P21817 5038 aa10.55□□□□□ -0.72
IRF3-223ENST00000599223 TRAV30A0A087WSZ9 112 aa10.54□□□□□ -0.72
IRF3-223ENST00000599223 A0A1B0GVY2 172 aa10.54□□□□□ -0.72
IRF3-223ENST00000599223 RPS10-NUDT3A0A1W2PQS6 291 aa10.54□□□□□ -0.72
IRF3-223ENST00000599223 SCGB2A1O75556 95 aa10.54□□□□□ -0.72
IRF3-223ENST00000599223 IL4P05112 153 aa10.54□□□□□ -0.72
IRF3-223ENST00000599223 NPY1RP25929 384 aa10.54□□□□□ -0.72
IRF3-223ENST00000599223 YPEL3P61236 119 aaPredicted RBP10.54□□□□□ -0.72
IRF3-223ENST00000599223 CLLU1Q5K131 121 aa10.54□□□□□ -0.72
IRF3-223ENST00000599223 RNF141Q8WVD5 230 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms