RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-222	ENST00000599144	SSBP1	Q04837	148 aa	Known RBP	13.45	□□□□□ -0.26
IRF3-222	ENST00000599144	FGL1	Q08830	312 aa		13.45	□□□□□ -0.26
IRF3-222	ENST00000599144	IL18	Q14116	193 aa		13.45	□□□□□ -0.26
IRF3-222	ENST00000599144	PRRT1	Q99946	306 aa		13.45	□□□□□ -0.26
IRF3-222	ENST00000599144	FABP1	P07148	127 aa		13.44	□□□□□ -0.26
IRF3-222	ENST00000599144	FAM3B	P58499	235 aa	Predicted RBP	13.44	□□□□□ -0.26
IRF3-222	ENST00000599144	THAP8	Q8NA92	274 aa		13.44	□□□□□ -0.26
IRF3-222	ENST00000599144	MCUB	Q9NWR8	336 aa		13.44	□□□□□ -0.26
IRF3-222	ENST00000599144	LYRM9	A8MSI8	78 aa		13.43	□□□□□ -0.26
IRF3-222	ENST00000599144	MRPS10	P82664	201 aa	Known RBP	13.43	□□□□□ -0.26
IRF3-222	ENST00000599144	RNF141	Q8WVD5	230 aa		13.43	□□□□□ -0.26
IRF3-222	ENST00000599144	CACFD1	Q9UGQ2	172 aa		13.43	□□□□□ -0.26
IRF3-222	ENST00000599144	ANKRD20A5P	A0PJZ0	165 aa		13.42	□□□□□ -0.26
IRF3-222	ENST00000599144		A6NHS1	94 aa		13.42	□□□□□ -0.26
IRF3-222	ENST00000599144	HTN1	P15515	57 aa		13.42	□□□□□ -0.26
IRF3-222	ENST00000599144	MEOX2	P50222	304 aa		13.42	□□□□□ -0.26
IRF3-222	ENST00000599144	SPATA12	Q7Z6I5	190 aa		13.42	□□□□□ -0.26
IRF3-222	ENST00000599144	OR1B1	Q8NGR6	318 aa		13.42	□□□□□ -0.26
IRF3-222	ENST00000599144	DIRAS2	Q96HU8	199 aa		13.42	□□□□□ -0.26
IRF3-222	ENST00000599144	UHRF2	Q96PU4	802 aa		13.42	□□□□□ -0.26
IRF3-222	ENST00000599144	KRTAP1-5	Q9BYS1	174 aa		13.42	□□□□□ -0.26
IRF3-222	ENST00000599144	PITX3	O75364	302 aa		13.41	□□□□□ -0.26
IRF3-222	ENST00000599144	DUSP14	O95147	198 aa	Known RBP	13.41	□□□□□ -0.26
IRF3-222	ENST00000599144	RAB11A	P62491	216 aa		13.41	□□□□□ -0.26
IRF3-222	ENST00000599144	LINC01587	Q99440	93 aa		13.41	□□□□□ -0.26
IRF3-222	ENST00000599144	SLIRP	Q9GZT3	109 aa	Known RBP	13.41	□□□□□ -0.26
IRF3-222	ENST00000599144	PRSS46	E5RG02	174 aa		13.4	□□□□□ -0.26
IRF3-222	ENST00000599144	HIST1H1A	Q02539	215 aa	Predicted RBP	13.4	□□□□□ -0.26
IRF3-222	ENST00000599144	TMED4	Q7Z7H5	227 aa		13.4	□□□□□ -0.26
IRF3-222	ENST00000599144	ZNF738	Q8NE65	137 aa		13.4	□□□□□ -0.26
IRF3-222	ENST00000599144	MCFD2	Q8NI22	146 aa		13.4	□□□□□ -0.26
IRF3-222	ENST00000599144	SCRT2	Q9NQ03	307 aa		13.4	□□□□□ -0.26
IRF3-222	ENST00000599144	SCP2D1	Q9UJQ7	156 aa		13.4	□□□□□ -0.26
IRF3-222	ENST00000599144		H3BP45	60 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	BOLA2-SMG1P6	H3BVE0	249 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	WRB	O00258	174 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	CTDSPL	O15194	276 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	ATP5G1	P05496	136 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	ATP5G3	P48201	142 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	CCL18	P55774	89 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	ATP5I	P56385	69 aa	Predicted RBP	13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	KRTAP10-2	P60368	255 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	SAMD13	Q5VXD3	122 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	GGNBP1	Q5YKI7	109 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	SSX7	Q7RTT5	188 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144		Q8N1X5	172 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	TMEM147	Q9BVK8	224 aa		13.39	□□□□□ -0.27
IRF3-222	ENST00000599144	ANXA3	P12429	323 aa		13.38	□□□□□ -0.27
IRF3-222	ENST00000599144	RHOB	P62745	196 aa		13.38	□□□□□ -0.27
IRF3-222	ENST00000599144	DLK1	P80370	383 aa		13.38	□□□□□ -0.27
IRF3-222	ENST00000599144	BPIFC	Q8NFQ6	507 aa		13.38	□□□□□ -0.27
IRF3-222	ENST00000599144	CBY3	A6NI87	242 aa		13.37	□□□□□ -0.27
IRF3-222	ENST00000599144		H3BRN7	92 aa		13.37	□□□□□ -0.27
IRF3-222	ENST00000599144	SNRPC	P09234	159 aa	Known RBP	13.37	□□□□□ -0.27
IRF3-222	ENST00000599144	TSPO	P30536	169 aa		13.37	□□□□□ -0.27
IRF3-222	ENST00000599144	AKR1C1	Q04828	323 aa		13.37	□□□□□ -0.27
IRF3-222	ENST00000599144	CLINT1	Q14677	625 aa		13.37	□□□□□ -0.27
IRF3-222	ENST00000599144	KIR3DS1	Q14943	382 aa		13.37	□□□□□ -0.27
IRF3-222	ENST00000599144	SPANXN5	Q5MJ07	72 aa		13.37	□□□□□ -0.27
IRF3-222	ENST00000599144	ACOT7L	Q6ZUV0	252 aa		13.37	□□□□□ -0.27
IRF3-222	ENST00000599144	SCGB3A2	Q96PL1	93 aa		13.37	□□□□□ -0.27
IRF3-222	ENST00000599144		A0A0J9YY99	117 aa		13.36	□□□□□ -0.27
IRF3-222	ENST00000599144	S100A5	P33763	92 aa		13.36	□□□□□ -0.27
IRF3-222	ENST00000599144	SRPX	P78539	464 aa		13.36	□□□□□ -0.27
IRF3-222	ENST00000599144	OR4D5	Q8NGN0	318 aa		13.36	□□□□□ -0.27
IRF3-222	ENST00000599144	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.36	□□□□□ -0.27
IRF3-222	ENST00000599144		Q9H8V8	135 aa		13.36	□□□□□ -0.27
IRF3-222	ENST00000599144	NOP10	Q9NPE3	64 aa	Known RBP	13.36	□□□□□ -0.27
IRF3-222	ENST00000599144	SLC45A2	Q9UMX9	530 aa		13.36	□□□□□ -0.27
IRF3-222	ENST00000599144	SMCO3	A2RU48	225 aa		13.35	□□□□□ -0.27
IRF3-222	ENST00000599144	CFD	P00746	253 aa	Predicted RBP	13.35	□□□□□ -0.27
IRF3-222	ENST00000599144	VAMP1	P23763	118 aa		13.35	□□□□□ -0.27
IRF3-222	ENST00000599144	OR5I1	Q13606	314 aa		13.35	□□□□□ -0.27
IRF3-222	ENST00000599144	OR8A1	Q8NGG7	326 aa		13.35	□□□□□ -0.27
IRF3-222	ENST00000599144	PPP1R14D	Q9NXH3	145 aa		13.35	□□□□□ -0.27
IRF3-222	ENST00000599144	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.35	□□□□□ -0.27
IRF3-222	ENST00000599144	RABL2B	Q9UNT1	228 aa		13.35	□□□□□ -0.27
IRF3-222	ENST00000599144	SYNGR2	O43760	224 aa		13.34	□□□□□ -0.27
IRF3-222	ENST00000599144	HOXB5	P09067	269 aa		13.34	□□□□□ -0.27
IRF3-222	ENST00000599144	CXCL3	P19876	107 aa		13.34	□□□□□ -0.27
IRF3-222	ENST00000599144	FUS	P35637	526 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
IRF3-222	ENST00000599144	TAS2R60	P59551	318 aa		13.34	□□□□□ -0.27
IRF3-222	ENST00000599144	SHANK2-AS3	Q9BTD1	123 aa		13.34	□□□□□ -0.27
IRF3-222	ENST00000599144	HERC1	Q15751	4861 aa		13.34	□□□□□ -0.27
IRF3-222	ENST00000599144	TRAV26-1	A0A087WT03	109 aa		13.33	□□□□□ -0.28
IRF3-222	ENST00000599144	B2M	P61769	119 aa		13.33	□□□□□ -0.28
IRF3-222	ENST00000599144	CYP2G1P	Q6ZSU1	146 aa		13.33	□□□□□ -0.28
IRF3-222	ENST00000599144	GPR82	Q96P67	336 aa		13.33	□□□□□ -0.28
IRF3-222	ENST00000599144	HIGD1A	Q9Y241	93 aa		13.33	□□□□□ -0.28
IRF3-222	ENST00000599144	CCNK	O75909	580 aa		13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	IL5	P05113	134 aa		13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	OR5G3	P0C626	314 aa		13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	HOXA5	P20719	270 aa		13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	TNFSF8	P32971	234 aa		13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	PSG3	Q16557	428 aa		13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	CNPY1	Q3B7I2	92 aa		13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	TMEM144	Q7Z5S9	345 aa		13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	C16orf74	Q96GX8	76 aa		13.32	□□□□□ -0.28
IRF3-222	ENST00000599144	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms