RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 ZNF546Q86UE3 836 aa13.58□□□□□ -0.24
SNRPA-205ENST00000598923 GATAD1Q8WUU5 269 aa13.58□□□□□ -0.24
SNRPA-205ENST00000598923 SHANK2-AS3Q9BTD1 123 aa13.58□□□□□ -0.24
SNRPA-205ENST00000598923 ARV1Q9H2C2 271 aa13.58□□□□□ -0.24
SNRPA-205ENST00000598923 AGRNO00468 2067 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 SOCS3O14543 225 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 IGKV3-20P01619 116 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 CAMLGP49069 296 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 PSMB3P49720 205 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 HBG1P69891 147 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 HBG2P69892 147 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 MORN3Q6PF18 240 aaPredicted RBP13.57□□□□□ -0.24
SNRPA-205ENST00000598923 PATE2Q6UY27 113 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 GPR82Q96P67 336 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 CLEC5AQ9NY25 188 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 OR5AC2Q9NZP5 309 aa13.57□□□□□ -0.24
SNRPA-205ENST00000598923 UBE2L5PA0A1B0GUS4 154 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 E5RGE8 158 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 H3BMM0 161 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 GIG44P09565 113 aaPredicted RBP13.56□□□□□ -0.24
SNRPA-205ENST00000598923 SPP1P10451 314 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 ATF4P18848 351 aaPredicted RBP13.56□□□□□ -0.24
SNRPA-205ENST00000598923 C4BPBP20851 252 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 MEOX2P50222 304 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 H2BFSP57053 126 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 BAXQ07812 192 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 GDF5OSQ5U4N7 250 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 MIC13Q5XKP0 118 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 S100A7AQ86SG5 101 aa13.56□□□□□ -0.24
SNRPA-205ENST00000598923 H0YIZ8 118 aa13.55□□□□□ -0.24
SNRPA-205ENST00000598923 ISLRO14498 428 aa13.55□□□□□ -0.24
SNRPA-205ENST00000598923 COX7A2P2O60397 106 aa13.55□□□□□ -0.24
SNRPA-205ENST00000598923 RPL7P18124 248 aaKnown RBP13.55□□□□□ -0.24
SNRPA-205ENST00000598923 EWSR1Q01844 656 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNRPA-205ENST00000598923 NHLH2Q02577 135 aa13.55□□□□□ -0.24
SNRPA-205ENST00000598923 ATP6V1FQ16864 119 aa13.55□□□□□ -0.24
SNRPA-205ENST00000598923 C17orf77Q96MU5 243 aa13.55□□□□□ -0.24
SNRPA-205ENST00000598923 SLC25A31Q9H0C2 315 aa13.55□□□□□ -0.24
SNRPA-205ENST00000598923 WDR83OSQ9Y284 106 aa13.55□□□□□ -0.24
SNRPA-205ENST00000598923 F6UB75 175 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 HLA-DRB4P13762 266 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 NUTF2P61970 127 aaKnown RBP13.54□□□□□ -0.24
SNRPA-205ENST00000598923 PMS2P11Q13670 270 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 PXDC1Q5TGL8 231 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 SAMD13Q5VXD3 122 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 IGFL4Q6B9Z1 124 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 EBLN2Q6P2I7 272 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 FOXI2Q6ZQN5 318 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 Q6ZRG5 221 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 LINC00305Q7Z4B0 112 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 OR4B1Q8NGF8 309 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 PPP1R1CQ8WVI7 109 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 C20orf173Q96LM9 149 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 SAV1Q9H4B6 383 aaPredicted RBP13.54□□□□□ -0.24
SNRPA-205ENST00000598923 HLA-DRB4X5D2U9 266 aa13.54□□□□□ -0.24
SNRPA-205ENST00000598923 DEFB4AO15263 64 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 SNRPCP09234 159 aaKnown RBP13.53□□□□□ -0.24
SNRPA-205ENST00000598923 FGF7P21781 194 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 FXYD7P58549 80 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 VWC2Q2TAL6 325 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 TMEM41BQ5BJD5 291 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 C10orf113Q5VZT2 155 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 LRRC20Q8TCA0 184 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 TMEM37Q8WXS4 190 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 RPRMQ9NS64 109 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 XCL2Q9UBD3 114 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 ALG5Q9Y673 324 aa13.53□□□□□ -0.24
SNRPA-205ENST00000598923 CXorf65A6NEN9 183 aa13.52□□□□□ -0.25
SNRPA-205ENST00000598923 RNF182Q8N6D2 247 aa13.52□□□□□ -0.25
SNRPA-205ENST00000598923 OR5C1Q8NGR4 320 aa13.52□□□□□ -0.25
SNRPA-205ENST00000598923 DNAJC4Q9NNZ3 241 aa13.52□□□□□ -0.25
SNRPA-205ENST00000598923 BIRC6Q9NR09 4857 aa13.51□□□□□ -0.25
SNRPA-205ENST00000598923 ELOA3CA0A087WX78 387 aaPredicted RBP13.51□□□□□ -0.25
SNRPA-205ENST00000598923 PTTG1O95997 202 aa13.51□□□□□ -0.25
SNRPA-205ENST00000598923 CLINT1Q14677 625 aa13.51□□□□□ -0.25
SNRPA-205ENST00000598923 LINC00476Q8WZB0 136 aa13.51□□□□□ -0.25
SNRPA-205ENST00000598923 RNF126Q9BV68 326 aa13.51□□□□□ -0.25
SNRPA-205ENST00000598923 RNF24Q9Y225 148 aa13.51□□□□□ -0.25
SNRPA-205ENST00000598923 TRAV8-2A0A0B4J237 113 aa13.5□□□□□ -0.25
SNRPA-205ENST00000598923 MPC2O95563 127 aa13.5□□□□□ -0.25
SNRPA-205ENST00000598923 RPL29P47914 159 aaKnown RBP13.5□□□□□ -0.25
SNRPA-205ENST00000598923 B2MP61769 119 aa13.5□□□□□ -0.25
SNRPA-205ENST00000598923 FAM78BQ5VT40 261 aa13.5□□□□□ -0.25
SNRPA-205ENST00000598923 OR1L4Q8NGR5 311 aa13.5□□□□□ -0.25
SNRPA-205ENST00000598923 THAP6Q8TBB0 222 aa13.5□□□□□ -0.25
SNRPA-205ENST00000598923 C1QTNF4Q9BXJ3 329 aa13.5□□□□□ -0.25
SNRPA-205ENST00000598923 SLC39A9Q9NUM3 307 aa13.5□□□□□ -0.25
SNRPA-205ENST00000598923 TRAV5A0A0B4J249 113 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 A0A0J9YX75 114 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 NUPR2A6NF83 97 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 HLA-DMBP28068 263 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 PRR20EP86478 221 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 PRR20CP86479 221 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 PRR20DP86480 221 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 PRR20BP86481 221 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 PRR20AP86496 221 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 OPCMLQ14982 345 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 MORN5Q5VZ52 161 aa13.49□□□□□ -0.25
SNRPA-205ENST00000598923 CSNK1G2-AS1Q8NCQ2 148 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms