RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 HIGD1AQ9Y241 93 aa16.57■□□□□ 0.24
SSBP4-205ENST00000598159 TMEM189A5PLL7 270 aa16.56■□□□□ 0.24
SSBP4-205ENST00000598159 F6UB75 175 aa16.56■□□□□ 0.24
SSBP4-205ENST00000598159 H3BRN7 92 aa16.56■□□□□ 0.24
SSBP4-205ENST00000598159 TEPPQ6URK8 271 aa16.56■□□□□ 0.24
SSBP4-205ENST00000598159 ZNF709Q8N972 641 aa16.56■□□□□ 0.24
SSBP4-205ENST00000598159 C20orf173Q96LM9 149 aa16.56■□□□□ 0.24
SSBP4-205ENST00000598159 SHANK2-AS3Q9BTD1 123 aa16.56■□□□□ 0.24
SSBP4-205ENST00000598159 CCDC32Q9BV29 185 aa16.56■□□□□ 0.24
SSBP4-205ENST00000598159 DOK5Q9P104 306 aa16.56■□□□□ 0.24
SSBP4-205ENST00000598159 K7EPK0 472 aa16.55■□□□□ 0.24
SSBP4-205ENST00000598159 MBPP02686 304 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-205ENST00000598159 LINC00869P0C866 280 aa16.55■□□□□ 0.24
SSBP4-205ENST00000598159 RPL7P18124 248 aaKnown RBP16.55■□□□□ 0.24
SSBP4-205ENST00000598159 ZNF846Q147U1 533 aa16.55■□□□□ 0.24
SSBP4-205ENST00000598159 C12orf74Q32Q52 190 aa16.55■□□□□ 0.24
SSBP4-205ENST00000598159 GGACTQ9BVM4 153 aa16.55■□□□□ 0.24
SSBP4-205ENST00000598159 SCRT1Q9BWW7 348 aa16.55■□□□□ 0.24
SSBP4-205ENST00000598159 SLC35B3Q9H1N7 401 aa16.55■□□□□ 0.24
SSBP4-205ENST00000598159 CELA1Q9UNI1 258 aa16.55■□□□□ 0.24
SSBP4-205ENST00000598159 RNF24Q9Y225 148 aa16.55■□□□□ 0.24
SSBP4-205ENST00000598159 RCL1Q9Y2P8 373 aaKnown RBP16.55■□□□□ 0.24
SSBP4-205ENST00000598159 C7orf66A4D0T2 115 aa16.54■□□□□ 0.24
SSBP4-205ENST00000598159 OR5G3P0C626 314 aa16.54■□□□□ 0.24
SSBP4-205ENST00000598159 LINC00299Q6ZSB3 139 aa16.54■□□□□ 0.24
SSBP4-205ENST00000598159 RPP25LQ8N5L8 163 aaKnown RBP16.54■□□□□ 0.24
SSBP4-205ENST00000598159 TRAV6A0A075B6T7 132 aa16.53■□□□□ 0.24
SSBP4-205ENST00000598159 IGHV3OR16-12A0A075B7B8 117 aa16.53■□□□□ 0.24
SSBP4-205ENST00000598159 A8MTW9 85 aa16.53■□□□□ 0.24
SSBP4-205ENST00000598159 DEDDO75618 318 aa16.53■□□□□ 0.24
SSBP4-205ENST00000598159 PXDC1Q5TGL8 231 aa16.53■□□□□ 0.24
SSBP4-205ENST00000598159 ZNF431Q8TF32 576 aaPredicted RBP16.53■□□□□ 0.24
SSBP4-205ENST00000598159 GOLT1BQ9Y3E0 138 aa16.53■□□□□ 0.24
SSBP4-205ENST00000598159 RFNGQ9Y644 331 aa16.53■□□□□ 0.24
SSBP4-205ENST00000598159 L7N2F9 121 aa16.52■□□□□ 0.24
SSBP4-205ENST00000598159 DUSP14O95147 198 aaKnown RBP16.52■□□□□ 0.24
SSBP4-205ENST00000598159 SPART-AS1P0CW21 52 aa16.52■□□□□ 0.24
SSBP4-205ENST00000598159 VAMP2P63027 116 aa16.52■□□□□ 0.24
SSBP4-205ENST00000598159 FGL1Q08830 312 aa16.52■□□□□ 0.24
SSBP4-205ENST00000598159 RNF126Q9BV68 326 aa16.52■□□□□ 0.24
SSBP4-205ENST00000598159 ARL6Q9H0F7 186 aa16.52■□□□□ 0.24
SSBP4-205ENST00000598159 NUDT15Q9NV35 164 aa16.52■□□□□ 0.24
SSBP4-205ENST00000598159 BIRC6Q9NR09 4857 aa16.51■□□□□ 0.23
SSBP4-205ENST00000598159 IGHV4-4A0A075B6R2 117 aa16.51■□□□□ 0.23
SSBP4-205ENST00000598159 DEFB131BA0A096LNP1 70 aa16.51■□□□□ 0.23
SSBP4-205ENST00000598159 FAM25EA8MYX2 175 aa16.51■□□□□ 0.23
SSBP4-205ENST00000598159 CCSO14618 274 aa16.51■□□□□ 0.23
SSBP4-205ENST00000598159 GOSR2O14653 212 aa16.51■□□□□ 0.23
SSBP4-205ENST00000598159 ARL16Q0P5N6 197 aa16.51■□□□□ 0.23
SSBP4-205ENST00000598159 C12orf45Q8N5I9 185 aaPredicted RBP16.51■□□□□ 0.23
SSBP4-205ENST00000598159 TRAV8-2A0A0B4J237 113 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 C5orf51A6NDU8 294 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 AMBPP02760 352 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 H2AFB2P0C5Z0 115 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 SLC38A11Q08AI6 406 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 PATE2Q6UY27 113 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 C1orf158Q8N1D5 194 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 C2orf50Q96LR7 162 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 UHRF2Q96PU4 802 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 SEC22CQ9BRL7 303 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 ARV1Q9H2C2 271 aa16.5■□□□□ 0.23
SSBP4-205ENST00000598159 AGPAT2O15120 278 aa16.49■□□□□ 0.23
SSBP4-205ENST00000598159 HBE1P02100 147 aa16.49■□□□□ 0.23
SSBP4-205ENST00000598159 IGFL4Q6B9Z1 124 aa16.49■□□□□ 0.23
SSBP4-205ENST00000598159 AMTNQ6UX39 209 aa16.49■□□□□ 0.23
SSBP4-205ENST00000598159 ZNF767PQ75MW2 155 aa16.49■□□□□ 0.23
SSBP4-205ENST00000598159 ZNF546Q86UE3 836 aa16.49■□□□□ 0.23
SSBP4-205ENST00000598159 S100ZQ8WXG8 99 aa16.49■□□□□ 0.23
SSBP4-205ENST00000598159 LSM5Q9Y4Y9 91 aaKnown RBP16.49■□□□□ 0.23
SSBP4-205ENST00000598159 A0A087X0K7 114 aa16.48■□□□□ 0.23
SSBP4-205ENST00000598159 TEX48A0A1B0GUV7 120 aa16.48■□□□□ 0.23
SSBP4-205ENST00000598159 FAM240BA0A1B0GVZ2 78 aa16.48■□□□□ 0.23
SSBP4-205ENST00000598159 BCAP31P51572 246 aa16.48■□□□□ 0.23
SSBP4-205ENST00000598159 CNN1P51911 297 aaKnown RBP16.48■□□□□ 0.23
SSBP4-205ENST00000598159 EMP1P54849 157 aa16.48■□□□□ 0.23
SSBP4-205ENST00000598159 MZT2BQ6NZ67 158 aa16.48■□□□□ 0.23
SSBP4-205ENST00000598159 RNF182Q8N6D2 247 aa16.48■□□□□ 0.23
SSBP4-205ENST00000598159 LRRC20Q8TCA0 184 aa16.48■□□□□ 0.23
SSBP4-205ENST00000598159 IGF2BP2-AS1Q96M15 143 aa16.48■□□□□ 0.23
SSBP4-205ENST00000598159 PVALBP20472 110 aaPredicted RBP16.47■□□□□ 0.23
SSBP4-205ENST00000598159 PRR20EP86478 221 aa16.47■□□□□ 0.23
SSBP4-205ENST00000598159 PRR20CP86479 221 aa16.47■□□□□ 0.23
SSBP4-205ENST00000598159 PRR20DP86480 221 aa16.47■□□□□ 0.23
SSBP4-205ENST00000598159 PRR20BP86481 221 aa16.47■□□□□ 0.23
SSBP4-205ENST00000598159 PRR20AP86496 221 aa16.47■□□□□ 0.23
SSBP4-205ENST00000598159 RAB31Q13636 194 aa16.46■□□□□ 0.23
SSBP4-205ENST00000598159 RRN3P1Q2M238 152 aa16.46■□□□□ 0.23
SSBP4-205ENST00000598159 LINC00305Q7Z4B0 112 aa16.46■□□□□ 0.23
SSBP4-205ENST00000598159 ZNF738Q8NE65 137 aa16.46■□□□□ 0.23
SSBP4-205ENST00000598159 OR11H7Q8NGC8 314 aa16.46■□□□□ 0.23
SSBP4-205ENST00000598159 DKK2Q9UBU2 259 aa16.46■□□□□ 0.23
SSBP4-205ENST00000598159 KMT2AQ03164 3969 aa16.46■□□□□ 0.23
SSBP4-205ENST00000598159 CXCL3P19876 107 aa16.45■□□□□ 0.22
SSBP4-205ENST00000598159 CAV2P51636 162 aa16.45■□□□□ 0.22
SSBP4-205ENST00000598159 B2MP61769 119 aa16.45■□□□□ 0.22
SSBP4-205ENST00000598159 PSG3Q16557 428 aa16.45■□□□□ 0.22
SSBP4-205ENST00000598159 TMEM208Q9BTX3 173 aa16.45■□□□□ 0.22
SSBP4-205ENST00000598159 C11orf1Q9H5F2 150 aa16.45■□□□□ 0.22
SSBP4-205ENST00000598159 LOC102723971A0A1B0GUV8 181 aa16.44■□□□□ 0.22
SSBP4-205ENST00000598159 MRPS12O15235 138 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms