RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 RFNGQ9Y644 331 aa8.92□□□□□ -0.98
TRIM28-212ENST00000597995 TRAV6A0A075B6T7 132 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 ZNF98A6NK75 572 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 CCSO14618 274 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 MBPP02686 304 aaPredicted RBP8.91□□□□□ -0.98
TRIM28-212ENST00000597995 METTL15P1P0C7V9 234 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 AKR1C1Q04828 323 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 ARL16Q0P5N6 197 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 OXA1LQ15070 435 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 CNPY1Q3B7I2 92 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 UBE2DNLQ8IWF7 75 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 OR8I2Q8N0Y5 310 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 C20orf173Q96LM9 149 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 SEC22CQ9BRL7 303 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 NIPSNAP3BQ9BS92 247 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 DKK2Q9UBU2 259 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 SLC45A2Q9UMX9 530 aa8.91□□□□□ -0.98
TRIM28-212ENST00000597995 C7orf66A4D0T2 115 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 SCGB1D2O95969 90 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 CFDP00746 253 aaPredicted RBP8.9□□□□□ -0.98
TRIM28-212ENST00000597995 ORM2P19652 201 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 ID1P41134 155 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 PSMB3P49720 205 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 EMP1P54849 157 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 RRAS2P62070 204 aaPredicted RBP8.9□□□□□ -0.98
TRIM28-212ENST00000597995 SPATA31B1PQ5VZV4 182 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 FOXI2Q6ZQN5 318 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 CYP2G1PQ6ZSU1 146 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 BPIFCQ8NFQ6 507 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 PPP1R14BQ96C90 147 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 LINC00052Q96N35 136 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 CCDC32Q9BV29 185 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 SAV1Q9H4B6 383 aaPredicted RBP8.9□□□□□ -0.98
TRIM28-212ENST00000597995 C11orf1Q9H5F2 150 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 NUDT15Q9NV35 164 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 GSKIPQ9P0R6 139 aa8.9□□□□□ -0.98
TRIM28-212ENST00000597995 IGLV2-18A0A075B6J9 118 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 SMCO3A2RU48 225 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 F6UB75 175 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 H3BRN7 92 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 IGKV3-20P01619 116 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 FXYD7P58549 80 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 TAS2R30P59541 319 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 DLK1P80370 383 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 FAM222AQ5U5X8 452 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 ZNF709Q8N972 641 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 OR1B1Q8NGR6 318 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 ZNF431Q8TF32 576 aaPredicted RBP8.89□□□□□ -0.99
TRIM28-212ENST00000597995 SLC25A22Q9H936 323 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 DOK5Q9P104 306 aa8.89□□□□□ -0.99
TRIM28-212ENST00000597995 IGHV3OR16-12A0A075B7B8 117 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 A6NHS1 94 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 FNDC10F2Z333 226 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 ISLRO14498 428 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 TSC22D2O75157 780 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 IL5P05113 134 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 S100A7P31151 101 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-212ENST00000597995 PLP1P60201 277 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 PATE2Q6UY27 113 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 LINC00299Q6ZSB3 139 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 RSG1Q9BU20 258 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 TMEM147Q9BVK8 224 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 SLC25A39Q9BZJ4 359 aaPredicted RBP8.88□□□□□ -0.99
TRIM28-212ENST00000597995 GOLT1BQ9Y3E0 138 aa8.88□□□□□ -0.99
TRIM28-212ENST00000597995 TRAV8-2A0A0B4J237 113 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 A0A0J9YX75 114 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 K7EPK0 472 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 HBE1P02100 147 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 H2AFB2P0C5Z0 115 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 LINC00869P0C866 280 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 GALR1P47211 349 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 PSG9Q00887 426 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 SLC38A11Q08AI6 406 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 IL15RAQ13261 267 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 SAMD13Q5VXD3 122 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 IGFL4Q6B9Z1 124 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 OR10P1Q8NGE3 313 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 UHRF2Q96PU4 802 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 SHANK2-AS3Q9BTD1 123 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 SLC35B3Q9H1N7 401 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 NPVFQ9HCQ7 196 aa8.87□□□□□ -0.99
TRIM28-212ENST00000597995 NACAE9PAV3 2078 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 A8MTW9 85 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 IFITM3Q01628 133 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 FAM78BQ5VT40 261 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 EBLN2Q6P2I7 272 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 ZNF575Q86XF7 245 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 C1orf158Q8N1D5 194 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 C12orf45Q8N5I9 185 aaPredicted RBP8.86□□□□□ -0.99
TRIM28-212ENST00000597995 C15orf53Q8NAA6 179 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 OR4B1Q8NGF8 309 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 C16orf92Q96LL3 132 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 PLA2G2EQ9NZK7 142 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 HIGD1AQ9Y241 93 aa8.86□□□□□ -0.99
TRIM28-212ENST00000597995 YTHDF2Q9Y5A9 579 aaKnown RBP8.86□□□□□ -0.99
TRIM28-212ENST00000597995 LOC102723971A0A1B0GUV8 181 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 FAM240BA0A1B0GVZ2 78 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms