RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 C20orf173Q96LM9 149 aa12.9□□□□□ -0.34
CHMP2A-203ENST00000597209 SHANK2-AS3Q9BTD1 123 aa12.9□□□□□ -0.34
CHMP2A-203ENST00000597209 CCDC32Q9BV29 185 aa12.9□□□□□ -0.34
CHMP2A-203ENST00000597209 GGACTQ9BVM4 153 aa12.9□□□□□ -0.34
CHMP2A-203ENST00000597209 GSKIPQ9P0R6 139 aa12.9□□□□□ -0.34
CHMP2A-203ENST00000597209 HIGD1AQ9Y241 93 aa12.9□□□□□ -0.34
CHMP2A-203ENST00000597209 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
CHMP2A-203ENST00000597209 IGLL5B9A064 214 aa12.89□□□□□ -0.35
CHMP2A-203ENST00000597209 MBPP02686 304 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-203ENST00000597209 RRAS2P62070 204 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-203ENST00000597209 FAM78BQ5VT40 261 aa12.89□□□□□ -0.35
CHMP2A-203ENST00000597209 TEPPQ6URK8 271 aa12.89□□□□□ -0.35
CHMP2A-203ENST00000597209 DOK5Q9P104 306 aa12.89□□□□□ -0.35
CHMP2A-203ENST00000597209 MGAT4CQ9UBM8 478 aa12.89□□□□□ -0.35
CHMP2A-203ENST00000597209 CELA1Q9UNI1 258 aa12.89□□□□□ -0.35
CHMP2A-203ENST00000597209 C7orf66A4D0T2 115 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 F6UB75 175 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 LINC00869P0C866 280 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 RPL7P18124 248 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 FXYD7P58549 80 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 C12orf74Q32Q52 190 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 PXDC1Q5TGL8 231 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 GSG1LQ6UXU4 331 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 RPP25LQ8N5L8 163 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 ZNF431Q8TF32 576 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 SCRT1Q9BWW7 348 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 SLC35B3Q9H1N7 401 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 RNF24Q9Y225 148 aa12.88□□□□□ -0.35
CHMP2A-203ENST00000597209 DEDDO75618 318 aa12.87□□□□□ -0.35
CHMP2A-203ENST00000597209 ZNF846Q147U1 533 aa12.87□□□□□ -0.35
CHMP2A-203ENST00000597209 RNF126Q9BV68 326 aa12.87□□□□□ -0.35
CHMP2A-203ENST00000597209 RFNGQ9Y644 331 aa12.87□□□□□ -0.35
CHMP2A-203ENST00000597209 A0A087X0K7 114 aa12.86□□□□□ -0.35
CHMP2A-203ENST00000597209 TRAV8-2A0A0B4J237 113 aa12.86□□□□□ -0.35
CHMP2A-203ENST00000597209 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
CHMP2A-203ENST00000597209 OR5G3P0C626 314 aa12.86□□□□□ -0.35
CHMP2A-203ENST00000597209 ARL16Q0P5N6 197 aa12.86□□□□□ -0.35
CHMP2A-203ENST00000597209 AMTNQ6UX39 209 aa12.86□□□□□ -0.35
CHMP2A-203ENST00000597209 NUDT15Q9NV35 164 aa12.86□□□□□ -0.35
CHMP2A-203ENST00000597209 GOLT1BQ9Y3E0 138 aa12.86□□□□□ -0.35
CHMP2A-203ENST00000597209 IGHV4-4A0A075B6R2 117 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 TRAV6A0A075B6T7 132 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 TEX48A0A1B0GUV7 120 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 L7N2F9 121 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 CCSO14618 274 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 AMBPP02760 352 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 SPART-AS1P0CW21 52 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 VAMP2P63027 116 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 PATE2Q6UY27 113 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 ZNF546Q86UE3 836 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 C1orf158Q8N1D5 194 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 C12orf45Q8N5I9 185 aaPredicted RBP12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 KMT2AQ03164 3969 aa12.85□□□□□ -0.35
CHMP2A-203ENST00000597209 IGHV3OR16-12A0A075B7B8 117 aa12.84□□□□□ -0.35
CHMP2A-203ENST00000597209 DEFB131BA0A096LNP1 70 aa12.84□□□□□ -0.35
CHMP2A-203ENST00000597209 H2AFB2P0C5Z0 115 aa12.84□□□□□ -0.35
CHMP2A-203ENST00000597209 SLC38A11Q08AI6 406 aa12.84□□□□□ -0.35
CHMP2A-203ENST00000597209 IGF2BP2-AS1Q96M15 143 aa12.84□□□□□ -0.35
CHMP2A-203ENST00000597209 UHRF2Q96PU4 802 aa12.84□□□□□ -0.35
CHMP2A-203ENST00000597209 SEC22CQ9BRL7 303 aa12.84□□□□□ -0.35
CHMP2A-203ENST00000597209 ARV1Q9H2C2 271 aa12.84□□□□□ -0.35
CHMP2A-203ENST00000597209 C11orf1Q9H5F2 150 aa12.84□□□□□ -0.35
CHMP2A-203ENST00000597209 GOSR2O14653 212 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 AGPAT2O15120 278 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 MRPS12O15235 138 aaKnown RBP12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 PRR20EP86478 221 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 PRR20CP86479 221 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 PRR20DP86480 221 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 PRR20BP86481 221 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 PRR20AP86496 221 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 FGL1Q08830 312 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 S100ZQ8WXG8 99 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 C2orf50Q96LR7 162 aa12.83□□□□□ -0.36
CHMP2A-203ENST00000597209 C5orf51A6NDU8 294 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 FAM25EA8MYX2 175 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 HBE1P02100 147 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 CNN1P51911 297 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 IL15RAQ13261 267 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 OXA1LQ15070 435 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 IGFL4Q6B9Z1 124 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 ZNF767PQ75MW2 155 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 RNF182Q8N6D2 247 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 OR11H7Q8NGC8 314 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 DKK2Q9UBU2 259 aa12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 LSM5Q9Y4Y9 91 aaKnown RBP12.82□□□□□ -0.36
CHMP2A-203ENST00000597209 VPS13DQ5THJ4 4388 aa12.81□□□□□ -0.36
CHMP2A-203ENST00000597209 FAM240BA0A1B0GVZ2 78 aa12.81□□□□□ -0.36
CHMP2A-203ENST00000597209 CXCL2P19875 107 aa12.81□□□□□ -0.36
CHMP2A-203ENST00000597209 CXCL3P19876 107 aa12.81□□□□□ -0.36
CHMP2A-203ENST00000597209 ASAH1Q13510 395 aa12.81□□□□□ -0.36
CHMP2A-203ENST00000597209 PSG3Q16557 428 aa12.81□□□□□ -0.36
CHMP2A-203ENST00000597209 MZT2BQ6NZ67 158 aa12.81□□□□□ -0.36
CHMP2A-203ENST00000597209 MGST2Q99735 147 aa12.81□□□□□ -0.36
CHMP2A-203ENST00000597209 LOC102723971A0A1B0GUV8 181 aa12.8□□□□□ -0.36
CHMP2A-203ENST00000597209 PVALBP20472 110 aaPredicted RBP12.8□□□□□ -0.36
CHMP2A-203ENST00000597209 BCAP31P51572 246 aa12.8□□□□□ -0.36
CHMP2A-203ENST00000597209 EMP1P54849 157 aa12.8□□□□□ -0.36
CHMP2A-203ENST00000597209 B2MP61769 119 aa12.8□□□□□ -0.36
CHMP2A-203ENST00000597209 RRN3P1Q2M238 152 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms