RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 C16orf90A8MZG2 172 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 VAMP1P23763 118 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 ALDH3B2P48448 385 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 B2MP61769 119 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 AKR1C1Q04828 323 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 TNP2Q05952 138 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 FCN2Q15485 313 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 TMEM128Q5BJH2 165 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 TMEM182Q6ZP80 229 aaPredicted RBP7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 RNF182Q8N6D2 247 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 GPR82Q96P67 336 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 CIB3Q96Q77 187 aaPredicted RBP7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 MRPS26Q9BYN8 205 aaKnown RBP7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 KRTAP4-5Q9BYR2 181 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 PPP1R14DQ9NXH3 145 aa7.44□□□□□ -1.22
CHMP2A-202ENST00000596708 TRAV12-2A0A075B6T6 113 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 FABP12A6NFH5 140 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 CRXO43186 299 aaPredicted RBP7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 SYNGR2O43760 224 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 SLC25A6P12236 298 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 FAUP35544 74 aaKnown RBP7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 CCL18P55774 89 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 RHOBP62745 196 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 SPANXN5Q5MJ07 72 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 BAP18Q8IXM2 172 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 C6orf223Q8N319 242 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 ZNF738Q8NE65 137 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 DYNC2LI1Q8TCX1 351 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 C17orf77Q96MU5 243 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 LINC01587Q99440 93 aa7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 SLC25A39Q9BZJ4 359 aaPredicted RBP7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 CCDC59Q9P031 241 aaKnown RBP7.43□□□□□ -1.22
CHMP2A-202ENST00000596708 ABCA13Q86UQ4 5058 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 TRAV8-2A0A0B4J237 113 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 NBDYA0A0U1RRE5 68 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 SMCO3A2RU48 225 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 PRSS46E5RG02 174 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 H3BP45 60 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 IL5P05113 134 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 ATP5G1P05496 136 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 HOXB5P09067 269 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 HTN1P15515 57 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 AZU1P20160 251 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 ATP5G3P48201 142 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 RAP2BP61225 183 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 HIST1H1AQ02539 215 aaPredicted RBP7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 LRTM2Q8N967 370 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 LRRC20Q8TCA0 184 aa7.42□□□□□ -1.22
CHMP2A-202ENST00000596708 H3BRN7 92 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 BOLA2-SMG1P6H3BVE0 249 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 SFT2D2O95562 160 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 RPL7P18124 248 aaKnown RBP7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 TSPOP30536 169 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 TNFSF8P32971 234 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 CLINT1Q14677 625 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 CYP2G1PQ6ZSU1 146 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 TMEM144Q7Z5S9 345 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 TOMM5Q8N4H5 51 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 ZNRF2Q8NHG8 242 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 RAB2BQ8WUD1 216 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 HIGD1AQ9Y241 93 aa7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 STRAPQ9Y3F4 350 aaKnown RBP7.41□□□□□ -1.22
CHMP2A-202ENST00000596708 CBY3A6NI87 242 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 HYPMO75409 117 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 OR5G3P0C626 314 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 PRB4P10163 310 aaPredicted RBP7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 TAS2R60P59551 318 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 AP3S2P59780 193 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 PPP1R1AQ13522 171 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 PYDC2Q56P42 97 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 ACOT7LQ6ZUV0 252 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 TMEM256Q8N2U0 113 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 MAPKAPK5-AS1Q8N8E1 139 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 OR8A1Q8NGG7 326 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 SOSTQ9BQB4 213 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 SHANK2-AS3Q9BTD1 123 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 LINC00588Q9Y4M8 146 aa7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 TIMM8BQ9Y5J9 83 aaPredicted RBP7.4□□□□□ -1.22
CHMP2A-202ENST00000596708 PLAC8L1A1L4L8 177 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 NOL3O60936 208 aaKnown RBP7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 CDK2AP2O75956 126 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 CXCL3P19876 107 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 TMBIM6P55061 237 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 OR5I1Q13606 314 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 PSG3Q16557 428 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 SSX7Q7RTT5 188 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 S100A7AQ86SG5 101 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 MCFD2Q8NI22 146 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 RNF141Q8WVD5 230 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 C16orf74Q96GX8 76 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 UHRF2Q96PU4 802 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 BCL7BQ9BQE9 202 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 SLC25A21Q9BQT8 299 aaPredicted RBP7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 PSENENQ9NZ42 101 aa7.39□□□□□ -1.23
CHMP2A-202ENST00000596708 LINC00869P0C866 280 aa7.38□□□□□ -1.23
CHMP2A-202ENST00000596708 ANXA7P20073 488 aaKnown RBP7.38□□□□□ -1.23
CHMP2A-202ENST00000596708 CDKN1BP46527 198 aa7.38□□□□□ -1.23
CHMP2A-202ENST00000596708 RRAS2P62070 204 aaPredicted RBP7.38□□□□□ -1.23
CHMP2A-202ENST00000596708 POLR2GP62487 172 aaKnown RBP eCLIP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms