RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 NRN1Q9NPD7 142 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 TIMM9Q9Y5J7 89 aa6.25□□□□□ -1.41
VRK3-211ENST00000596445 K7EQG2 157 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 JTBO76095 146 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 RPL7P18124 248 aaKnown RBP6.24□□□□□ -1.41
VRK3-211ENST00000596445 TFPI2P48307 235 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 CMC4P56277 68 aaPredicted RBP6.24□□□□□ -1.41
VRK3-211ENST00000596445 FFAR4Q5NUL3 377 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 RPL7L1Q6DKI1 246 aaKnown RBP6.24□□□□□ -1.41
VRK3-211ENST00000596445 WFDC3Q8IUB2 231 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 HSD17B11Q8NBQ5 300 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 MRAPQ8TCY5 172 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 DCANP1Q8TF63 244 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 SLC25A32Q9H2D1 315 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 C19orf73Q9NVV2 129 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 SMAD5-AS1Q9Y6J3 95 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 COL7A1Q02388 2944 aa6.24□□□□□ -1.41
VRK3-211ENST00000596445 OR11H12B2RN74 326 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 CXCL2P19875 107 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 ATP6V0CP27449 155 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 MEOX2P50222 304 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 CD300CQ08708 224 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 ODF3L2Q3SX64 289 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 DEFB121Q5J5C9 76 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 GCSAMLQ5JQS6 135 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 MORN5Q5VZ52 161 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 TMUB2Q71RG4 321 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 BPIFA4PQ86YQ2 179 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 GNPNAT1Q96EK6 184 aaPredicted RBP6.23□□□□□ -1.41
VRK3-211ENST00000596445 HYLS1Q96M11 299 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 ARPC5LQ9BPX5 153 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 PSMG3Q9BT73 122 aaPredicted RBP6.23□□□□□ -1.41
VRK3-211ENST00000596445 SEPSECSQ9HD40 501 aaKnown RBP6.23□□□□□ -1.41
VRK3-211ENST00000596445 CYTL1Q9NRR1 136 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 RFNGQ9Y644 331 aa6.23□□□□□ -1.41
VRK3-211ENST00000596445 KANTRA0A1W2PQU2 76 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 A8MZ25 164 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 MRPS12O15235 138 aaKnown RBP6.22□□□□□ -1.41
VRK3-211ENST00000596445 BCL2L11O43521 198 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 IGHV4-30-4P0DP06 118 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 ATF4P18848 351 aaPredicted RBP6.22□□□□□ -1.41
VRK3-211ENST00000596445 M6PRP20645 277 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 ID1P41134 155 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 SNRPD3P62318 126 aaKnown RBP6.22□□□□□ -1.41
VRK3-211ENST00000596445 SERF2P84101 59 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 ACOT6Q3I5F7 207 aaPredicted RBP6.22□□□□□ -1.41
VRK3-211ENST00000596445 FAM78BQ5VT40 261 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 SAMD13Q5VXD3 122 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 FAM24BQ8N5W8 94 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 DEFB125Q8N687 156 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 OR2G3Q8NGZ4 309 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 C17orf77Q96MU5 243 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 MRPL32Q9BYC8 188 aaKnown RBP6.22□□□□□ -1.41
VRK3-211ENST00000596445 WFDC10AQ9H1F0 79 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 SH3BGRL3Q9H299 93 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 TUBA4BQ9H853 241 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 MAP6D1Q9H9H5 199 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 UBQLN2Q9UHD9 624 aa6.22□□□□□ -1.41
VRK3-211ENST00000596445 TGP01266 2768 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 A0A087X0K7 114 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 TRAV5A0A0B4J249 113 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 ISLRO14498 428 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 SOCS3O14543 225 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 PFDN1O60925 122 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 MBP02144 154 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 ZNF688P0C7X2 276 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 PSMB3P49720 205 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 RHOBP62745 196 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 LGALSLQ3ZCW2 172 aaPredicted RBP6.21□□□□□ -1.42
VRK3-211ENST00000596445 ZFP69Q49AA0 526 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 SPATA31B1PQ5VZV4 182 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 MIR17HGQ75NE6 70 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 FAM167A-AS1Q96KT0 104 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 C16orf92Q96LL3 132 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 SLC25A2Q9BXI2 301 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 HRH4Q9H3N8 390 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 SRD5A3Q9H8P0 318 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 TMEM14CQ9P0S9 112 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 FUT9Q9Y231 359 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 NBEAL2Q6ZNJ1 2754 aa6.21□□□□□ -1.42
VRK3-211ENST00000596445 FRMD6-AS1P0C7T7 363 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 IGLC2P0DOY2 106 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 DEFB131AP59861 70 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 RAB2AP61019 212 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 EIF5AP63241 154 aaKnown RBP6.2□□□□□ -1.42
VRK3-211ENST00000596445 GUK1Q16774 197 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 PSMG4Q5JS54 123 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 LCN15Q6UWW0 184 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 APRG1Q8IVJ8 170 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 OR10G4Q8NGN3 311 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 OR10G9Q8NGN4 311 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 OR10G7Q8NGN6 311 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 CITED4Q96RK1 184 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 ZNF471Q9BX82 626 aaPredicted RBP6.2□□□□□ -1.42
VRK3-211ENST00000596445 AGRNO00468 2067 aa6.2□□□□□ -1.42
VRK3-211ENST00000596445 TRAV8-2A0A0B4J237 113 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 A0A1W2PPV4 95 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 RBMY1BA6NDE4 496 aaKnown RBP6.19□□□□□ -1.42
VRK3-211ENST00000596445 RBMY1EA6NEQ0 496 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms