RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 RBPMS2Q6ZRY4 209 aaKnown RBP7.85□□□□□ -1.15
LIG1-210ENST00000596332 LINC00305Q7Z4B0 112 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 ZNF503Q96F45 646 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 TIMM9Q9Y5J7 89 aa7.85□□□□□ -1.15
LIG1-210ENST00000596332 DNAH9Q9NYC9 4486 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 ELOA3CA0A087WX78 387 aaPredicted RBP7.84□□□□□ -1.15
LIG1-210ENST00000596332 TRAV2A0A0B4J234 112 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 TRAV8-2A0A0B4J237 113 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 H3BQ15 152 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 EIF3GO75821 320 aaKnown RBP eCLIP7.84□□□□□ -1.15
LIG1-210ENST00000596332 RAB31Q13636 194 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 C10orf113Q5VZT2 155 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 DEFB125Q8N687 156 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 HSD17B11Q8NBQ5 300 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 OR2G3Q8NGZ4 309 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 GATAD1Q8WUU5 269 aa7.84□□□□□ -1.15
LIG1-210ENST00000596332 SAT2Q96F10 170 aaPredicted RBP7.84□□□□□ -1.15
LIG1-210ENST00000596332 RBMY1BA6NDE4 496 aaKnown RBP7.83□□□□□ -1.16
LIG1-210ENST00000596332 RBMY1EA6NEQ0 496 aaKnown RBP7.83□□□□□ -1.16
LIG1-210ENST00000596332 IFNA5P01569 189 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 CD5P06127 495 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 RBMY1DP0C7P1 496 aaKnown RBP7.83□□□□□ -1.16
LIG1-210ENST00000596332 IGLC2P0DOY2 106 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 TFPI2P48307 235 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 Q6ZRG5 221 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 TMUB2Q71RG4 321 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 MIR17HGQ75NE6 70 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 WFDC3Q8IUB2 231 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 C9orf62Q8N4C0 152 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 RPP25LQ8N5L8 163 aaKnown RBP7.83□□□□□ -1.16
LIG1-210ENST00000596332 C20orf173Q96LM9 149 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 FAM110AQ9BQ89 295 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 SLC25A2Q9BXI2 301 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 TMEM231Q9H6L2 316 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 SLC25A22Q9H936 323 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 MAP6D1Q9H9H5 199 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 NRN1Q9NPD7 142 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 ZMAT5Q9UDW3 170 aaKnown RBP7.83□□□□□ -1.16
LIG1-210ENST00000596332 UBQLN2Q9UHD9 624 aa7.83□□□□□ -1.16
LIG1-210ENST00000596332 COL7A1Q02388 2944 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 A0A087X0K7 114 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 A0A0D9SG52 128 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 HELTA6NFD8 242 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 TAAR5O14804 337 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 COX7A2P2O60397 106 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 SNRPCP09234 159 aaKnown RBP7.82□□□□□ -1.16
LIG1-210ENST00000596332 IGHV4-30-4P0DP06 118 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 NUP62P37198 522 aaPredicted RBP7.82□□□□□ -1.16
LIG1-210ENST00000596332 NKX2-5P52952 324 aaPredicted RBP7.82□□□□□ -1.16
LIG1-210ENST00000596332 DEFB1P60022 68 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 CD81P60033 236 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 RAB2AP61019 212 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 ZNF266Q14584 549 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 FFAR4Q5NUL3 377 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 ZNF767PQ75MW2 155 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 SSX7Q7RTT5 188 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 APRG1Q8IVJ8 170 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 OR8I2Q8N0Y5 310 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 STXBP6Q8NFX7 210 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 SCGB1C1Q8TD33 95 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 GRAMD2BQ96HH9 432 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 ARPC5LQ9BPX5 153 aa7.82□□□□□ -1.16
LIG1-210ENST00000596332 PSMG3Q9BT73 122 aaPredicted RBP7.82□□□□□ -1.16
LIG1-210ENST00000596332 OR4C46A6NHA9 309 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 OR11H12B2RN74 326 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 C17orf112F2Z3M2 114 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 SLC17A3O00476 420 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 BCL2L11O43521 198 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 JTBO76095 146 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 NDUFB4O95168 129 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 SPP1P10451 314 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 BMI1P35226 326 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 ZNF726P1Q15940 193 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 FAM78BQ5VT40 261 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 IGFL4Q6B9Z1 124 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 SLC7A5P1Q8MH63 180 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 OR1L4Q8NGR5 311 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 HYLS1Q96M11 299 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 GPR82Q96P67 336 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 PFDN5Q99471 154 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 RPRMQ9NS64 109 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 ZNF586Q9NXT0 402 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 TMEM14CQ9P0S9 112 aa7.81□□□□□ -1.16
LIG1-210ENST00000596332 H3BTX0 84 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 FRMD6-AS1P0C7T7 363 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 PYYP10082 97 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 RPL7P18124 248 aaKnown RBP7.8□□□□□ -1.16
LIG1-210ENST00000596332 M6PRP20645 277 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 HLA-DMBP28068 263 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 DEFB131AP59861 70 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 RPL11P62913 178 aaKnown RBP7.8□□□□□ -1.16
LIG1-210ENST00000596332 SERF2P84101 59 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 ZNF709Q8N972 641 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 MRAPQ8TCY5 172 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 FXYD5Q96DB9 178 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 NARS2Q96I59 477 aaKnown RBP7.8□□□□□ -1.16
LIG1-210ENST00000596332 HRH4Q9H3N8 390 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 PFDN2Q9UHV9 154 aa7.8□□□□□ -1.16
LIG1-210ENST00000596332 FUT9Q9Y231 359 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms