RNA–Protein interactions for RNA: ENST00000594847.6

STRN4-210, Transcript of striatin 4, human

TSL 3

Gene STRN4, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-210	ENST00000594847	SLC39A9	Q9NUM3	307 aa		11.19	□□□□□ -0.62
STRN4-210	ENST00000594847	ELOA3C	A0A087WX78	387 aa	Predicted RBP	11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	ZNF688	P0C7X2	276 aa		11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	B2M	P61769	119 aa		11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	OR2T35	Q8NGX2	323 aa		11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	GPR82	Q96P67	336 aa		11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	SLC25A22	Q9H936	323 aa		11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	DNAJC4	Q9NNZ3	241 aa		11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	PXMP4	Q9Y6I8	212 aa		11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	AGRN	O00468	2067 aa		11.18	□□□□□ -0.62
STRN4-210	ENST00000594847	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.17	□□□□□ -0.62
STRN4-210	ENST00000594847	RNF222	A6NCQ9	220 aa		11.17	□□□□□ -0.62
STRN4-210	ENST00000594847	S100A7	P31151	101 aa		11.17	□□□□□ -0.62
STRN4-210	ENST00000594847	GALR1	P47211	349 aa		11.17	□□□□□ -0.62
STRN4-210	ENST00000594847		Q6ZNX1	250 aa		11.17	□□□□□ -0.62
STRN4-210	ENST00000594847	LINC00305	Q7Z4B0	112 aa		11.17	□□□□□ -0.62
STRN4-210	ENST00000594847	COX7A2P2	O60397	106 aa		11.16	□□□□□ -0.62
STRN4-210	ENST00000594847	C10orf113	Q5VZT2	155 aa		11.16	□□□□□ -0.62
STRN4-210	ENST00000594847		Q6ZRG5	221 aa		11.16	□□□□□ -0.62
STRN4-210	ENST00000594847	RSG1	Q9BU20	258 aa		11.16	□□□□□ -0.62
STRN4-210	ENST00000594847	SMIM3	Q9BZL3	60 aa		11.16	□□□□□ -0.62
STRN4-210	ENST00000594847	TNFSF18	Q9UNG2	199 aa		11.16	□□□□□ -0.62
STRN4-210	ENST00000594847		A0A087X0K7	114 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	KIR2DL5B	A0A0G2JN68	375 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	KIR2DL5B	A0A0G2JPC4	375 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	ISLR	O14498	428 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	RPL7	P18124	248 aa	Known RBP	11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	PSMB3	P49720	205 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	GCSAML	Q5JQS6	135 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	S100A7A	Q86SG5	101 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	KIR2DL5A	Q8N109	375 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	OR1L4	Q8NGR5	311 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	KIR2DL5B	Q8NHK3	375 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	GATAD1	Q8WUU5	269 aa		11.15	□□□□□ -0.62
STRN4-210	ENST00000594847	TRAV8-2	A0A0B4J237	113 aa		11.14	□□□□□ -0.63
STRN4-210	ENST00000594847	MEOX2	P50222	304 aa		11.14	□□□□□ -0.63
STRN4-210	ENST00000594847	SNRPD3	P62318	126 aa	Known RBP	11.14	□□□□□ -0.63
STRN4-210	ENST00000594847	PSMG4	Q5JS54	123 aa		11.14	□□□□□ -0.63
STRN4-210	ENST00000594847	TRPT1	Q86TN4	253 aa	Known RBP	11.14	□□□□□ -0.63
STRN4-210	ENST00000594847	C20orf173	Q96LM9	149 aa		11.14	□□□□□ -0.63
STRN4-210	ENST00000594847	PFDN5	Q99471	154 aa		11.14	□□□□□ -0.63
STRN4-210	ENST00000594847	RFNG	Q9Y644	331 aa		11.14	□□□□□ -0.63
STRN4-210	ENST00000594847		U3KQK5	164 aa		11.14	□□□□□ -0.63
STRN4-210	ENST00000594847	TRAV5	A0A0B4J249	113 aa		11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	KNCN	A6PVL3	124 aa		11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	GIG44	P09565	113 aa	Predicted RBP	11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	IGLC2	P0DOY2	106 aa		11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	RPL35A	P18077	110 aa	Known RBP	11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	SAMD13	Q5VXD3	122 aa		11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	RCHY1	Q96PM5	261 aa		11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	SPATA25	Q9BR10	227 aa		11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	RETN	Q9HD89	108 aa		11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	RNF24	Q9Y225	148 aa		11.13	□□□□□ -0.63
STRN4-210	ENST00000594847	FXYD6-FXYD2	A0A087WZ82	144 aa		11.12	□□□□□ -0.63
STRN4-210	ENST00000594847	SMLR1	H3BR10	107 aa		11.12	□□□□□ -0.63
STRN4-210	ENST00000594847	IFNA5	P01569	189 aa		11.12	□□□□□ -0.63
STRN4-210	ENST00000594847	BPIFA4P	Q86YQ2	179 aa		11.12	□□□□□ -0.63
STRN4-210	ENST00000594847	OR11H4	Q8NGC9	324 aa		11.12	□□□□□ -0.63
STRN4-210	ENST00000594847	FAM167A-AS1	Q96KT0	104 aa		11.12	□□□□□ -0.63
STRN4-210	ENST00000594847	ZMAT4	Q9H898	229 aa		11.12	□□□□□ -0.63
STRN4-210	ENST00000594847	KCNIP2	Q9NS61	270 aa		11.12	□□□□□ -0.63
STRN4-210	ENST00000594847		H3BMM0	161 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847		H3BQ15	152 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	UBE2C	O00762	179 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	ID1	P41134	155 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	APOC4	P55056	127 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	DEFB1	P60022	68 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	GDF5OS	Q5U4N7	250 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	SPATA31B1P	Q5VZV4	182 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847		Q6ZWC4	215 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	ZNF709	Q8N972	641 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	SCGB1C1	Q8TD33	95 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	SAT2	Q96F10	170 aa	Predicted RBP	11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	ST6GAL2	Q96JF0	529 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	OVOL2	Q9BRP0	275 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	CSTL1	Q9H114	145 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	HRH4	Q9H3N8	390 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847	TIMM9	Q9Y5J7	89 aa		11.11	□□□□□ -0.63
STRN4-210	ENST00000594847		A8MTW9	85 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	C17orf112	F2Z3M2	114 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	HLA-DRB4	P13762	266 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	ATF4	P18848	351 aa	Predicted RBP	11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	CXCL2	P19875	107 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	ACTL10	Q5JWF8	245 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	STH	Q8IWL8	128 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	C16orf92	Q96LL3	132 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	CLUHP3	Q96NS8	147 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	SAV1	Q9H4B6	383 aa	Predicted RBP	11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	ZNF331	Q9NQX6	463 aa	Predicted RBP	11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	TMEM14C	Q9P0S9	112 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	TP53TG1	Q9Y2A0	90 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	HLA-DRB4	X5D2U9	266 aa		11.1	□□□□□ -0.63
STRN4-210	ENST00000594847	ZNF266	Q14584	549 aa		11.09	□□□□□ -0.63
STRN4-210	ENST00000594847	FFAR4	Q5NUL3	377 aa		11.09	□□□□□ -0.63
STRN4-210	ENST00000594847	FAM78B	Q5VT40	261 aa		11.09	□□□□□ -0.63
STRN4-210	ENST00000594847	IGFL4	Q6B9Z1	124 aa		11.09	□□□□□ -0.63
STRN4-210	ENST00000594847	FOXI2	Q6ZQN5	318 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms