RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 CEMP1Q6PRD7 247 aaPredicted RBP10.71□□□□□ -0.69
USE1-205ENST00000594724 Q8NAQ8 132 aa10.71□□□□□ -0.69
USE1-205ENST00000594724 SHANK2-AS3Q9BTD1 123 aa10.71□□□□□ -0.69
USE1-205ENST00000594724 GGACTQ9BVM4 153 aa10.71□□□□□ -0.69
USE1-205ENST00000594724 C11orf68Q9H3H3 251 aaKnown RBP10.71□□□□□ -0.69
USE1-205ENST00000594724 SAV1Q9H4B6 383 aaPredicted RBP10.71□□□□□ -0.69
USE1-205ENST00000594724 GPN1Q9HCN4 374 aaPredicted RBP10.71□□□□□ -0.69
USE1-205ENST00000594724 BATF3Q9NR55 127 aa10.71□□□□□ -0.69
USE1-205ENST00000594724 X6R8D5 127 aa10.71□□□□□ -0.69
USE1-205ENST00000594724 IGHV4-28A0A0C4DH34 117 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 NUPR2A6NF83 97 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 INMT-MINDY4F8WBC2 141 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 JTBO76095 146 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 RBMY1A1P0DJD3 496 aaKnown RBP10.7□□□□□ -0.7
USE1-205ENST00000594724 RBMY1CP0DJD4 496 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 PVALBP20472 110 aaPredicted RBP10.7□□□□□ -0.7
USE1-205ENST00000594724 MEOX2P50222 304 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 FGL1Q08830 312 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 RBMY1FQ15415 496 aaKnown RBP10.7□□□□□ -0.7
USE1-205ENST00000594724 FOXI2Q6ZQN5 318 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 OR4B1Q8NGF8 309 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 C11orf45Q8TAV5 145 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 GPR82Q96P67 336 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 MGST2Q99735 147 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 RYR2Q92736 4967 aa10.7□□□□□ -0.7
USE1-205ENST00000594724 IGSF23A1L1A6 192 aa10.69□□□□□ -0.7
USE1-205ENST00000594724 ZNF705EA8MWA4 302 aaPredicted RBP10.69□□□□□ -0.7
USE1-205ENST00000594724 ZNF546Q86UE3 836 aa10.69□□□□□ -0.7
USE1-205ENST00000594724 TMEM252Q8N6L7 170 aa10.69□□□□□ -0.7
USE1-205ENST00000594724 PHLDA1Q8WV24 401 aaPredicted RBP10.69□□□□□ -0.7
USE1-205ENST00000594724 C1QTNF4Q9BXJ3 329 aa10.69□□□□□ -0.7
USE1-205ENST00000594724 ARV1Q9H2C2 271 aa10.69□□□□□ -0.7
USE1-205ENST00000594724 RPRMQ9NS64 109 aa10.69□□□□□ -0.7
USE1-205ENST00000594724 TRAV8-2A0A0B4J237 113 aa10.68□□□□□ -0.7
USE1-205ENST00000594724 MIFP14174 115 aa10.68□□□□□ -0.7
USE1-205ENST00000594724 RPL7P18124 248 aaKnown RBP10.68□□□□□ -0.7
USE1-205ENST00000594724 PLECQ15149 4684 aaKnown RBP10.68□□□□□ -0.7
USE1-205ENST00000594724 FAM78BQ5VT40 261 aa10.68□□□□□ -0.7
USE1-205ENST00000594724 SAMD13Q5VXD3 122 aa10.68□□□□□ -0.7
USE1-205ENST00000594724 EBLN2Q6P2I7 272 aa10.68□□□□□ -0.7
USE1-205ENST00000594724 RNF182Q8N6D2 247 aa10.68□□□□□ -0.7
USE1-205ENST00000594724 SLC35B3Q9H1N7 401 aa10.68□□□□□ -0.7
USE1-205ENST00000594724 LYRM2Q9NU23 88 aaPredicted RBP10.68□□□□□ -0.7
USE1-205ENST00000594724 UQCC1Q9NVA1 299 aa10.68□□□□□ -0.7
USE1-205ENST00000594724 ELOA3CA0A087WX78 387 aaPredicted RBP10.67□□□□□ -0.7
USE1-205ENST00000594724 A0A0J9YX75 114 aa10.67□□□□□ -0.7
USE1-205ENST00000594724 PRAF2O60831 178 aa10.67□□□□□ -0.7
USE1-205ENST00000594724 CAMLGP49069 296 aa10.67□□□□□ -0.7
USE1-205ENST00000594724 SULT1A1P50225 295 aa10.67□□□□□ -0.7
USE1-205ENST00000594724 LINC00305Q7Z4B0 112 aa10.67□□□□□ -0.7
USE1-205ENST00000594724 TMEM37Q8WXS4 190 aa10.67□□□□□ -0.7
USE1-205ENST00000594724 LYSTQ99698 3801 aa10.67□□□□□ -0.7
USE1-205ENST00000594724 KLK5Q9Y337 293 aaPredicted RBP10.67□□□□□ -0.7
USE1-205ENST00000594724 COX7A2P2O60397 106 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 SNRPCP09234 159 aaKnown RBP10.66□□□□□ -0.7
USE1-205ENST00000594724 ZNF705DP0CH99 300 aaPredicted RBP10.66□□□□□ -0.7
USE1-205ENST00000594724 ZNF705BP0CI00 300 aaPredicted RBP10.66□□□□□ -0.7
USE1-205ENST00000594724 HLA-DMBP28068 263 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 S100A11P31949 105 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 DEFA1P59665 94 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 DEFA3P59666 94 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 PSG9Q00887 426 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 LRRC37A5PQ49AS3 106 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 PXDC1Q5TGL8 231 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 MORN5Q5VZ52 161 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 SPATA31B1PQ5VZV4 182 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 MIC13Q5XKP0 118 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 S100A7AQ86SG5 101 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 ZNF709Q8N972 641 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 CLUHP3Q96NS8 147 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 MARVELD1Q9BSK0 173 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 MFFQ9GZY8 342 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 WDR83OSQ9Y284 106 aa10.66□□□□□ -0.7
USE1-205ENST00000594724 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
USE1-205ENST00000594724 UBE2L5PA0A1B0GUS4 154 aa10.65□□□□□ -0.7
USE1-205ENST00000594724 MRPS12O15235 138 aaKnown RBP10.65□□□□□ -0.7
USE1-205ENST00000594724 PRB4P10163 310 aaPredicted RBP10.65□□□□□ -0.7
USE1-205ENST00000594724 NHLH2Q02577 135 aa10.65□□□□□ -0.7
USE1-205ENST00000594724 RAB31Q13636 194 aa10.65□□□□□ -0.7
USE1-205ENST00000594724 VWC2Q2TAL6 325 aa10.65□□□□□ -0.7
USE1-205ENST00000594724 STX12Q86Y82 276 aa10.65□□□□□ -0.7
USE1-205ENST00000594724 NMES1Q9C002 83 aa10.65□□□□□ -0.7
USE1-205ENST00000594724 OR5AC2Q9NZP5 309 aa10.65□□□□□ -0.7
USE1-205ENST00000594724 DNAH1Q9P2D7 4330 aa10.65□□□□□ -0.7
USE1-205ENST00000594724 A0A087X0K7 114 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 H0YIZ8 118 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 RLN2P04090 185 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 HBG1P69891 147 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 HBG2P69892 147 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 BAXQ07812 192 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 C10orf113Q5VZT2 155 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 Q6ZRG5 221 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 ZNF738Q8NE65 137 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 LRRC20Q8TCA0 184 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 DNAJC4Q9NNZ3 241 aa10.64□□□□□ -0.71
USE1-205ENST00000594724 TRAV5A0A0B4J249 113 aa10.63□□□□□ -0.71
USE1-205ENST00000594724 H3BTX0 84 aa10.63□□□□□ -0.71
USE1-205ENST00000594724 LY6G6CO95867 125 aa10.63□□□□□ -0.71
USE1-205ENST00000594724 CXCL3P19876 107 aa10.63□□□□□ -0.71
USE1-205ENST00000594724 FGF7P21781 194 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms