RNA–Protein interactions for RNA: ENST00000594693.5

ZNF548-204, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-204ENST00000594693 TIMM9Q9Y5J7 89 aa13.18□□□□□ -0.3
ZNF548-204ENST00000594693 RFNGQ9Y644 331 aa13.18□□□□□ -0.3
ZNF548-204ENST00000594693 SMAD5-AS1Q9Y6J3 95 aa13.18□□□□□ -0.3
ZNF548-204ENST00000594693 A0A0D9SG52 128 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 K7EQG2 157 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 TFPI2P48307 235 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 CD300CQ08708 224 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 GCSAMLQ5JQS6 135 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 MORN5Q5VZ52 161 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 WFDC3Q8IUB2 231 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 STXBP6Q8NFX7 210 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 C17orf77Q96MU5 243 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 FAM110AQ9BQ89 295 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 NRN1Q9NPD7 142 aa13.17□□□□□ -0.3
ZNF548-204ENST00000594693 BORCS7-ASMTA0A0B4J1R7 106 aa13.16□□□□□ -0.3
ZNF548-204ENST00000594693 JTBO76095 146 aa13.16□□□□□ -0.3
ZNF548-204ENST00000594693 CMC4P56277 68 aaPredicted RBP13.16□□□□□ -0.3
ZNF548-204ENST00000594693 A8MZ25 164 aa13.15□□□□□ -0.3
ZNF548-204ENST00000594693 MRPS12O15235 138 aaKnown RBP13.15□□□□□ -0.3
ZNF548-204ENST00000594693 RPL7P18124 248 aaKnown RBP13.15□□□□□ -0.3
ZNF548-204ENST00000594693 ATP6V0CP27449 155 aa13.15□□□□□ -0.3
ZNF548-204ENST00000594693 GALR1P47211 349 aa13.15□□□□□ -0.3
ZNF548-204ENST00000594693 DEFB121Q5J5C9 76 aa13.15□□□□□ -0.3
ZNF548-204ENST00000594693 FFAR4Q5NUL3 377 aa13.15□□□□□ -0.3
ZNF548-204ENST00000594693 HSD17B11Q8NBQ5 300 aa13.15□□□□□ -0.3
ZNF548-204ENST00000594693 MRAPQ8TCY5 172 aa13.15□□□□□ -0.3
ZNF548-204ENST00000594693 HYLS1Q96M11 299 aa13.15□□□□□ -0.3
ZNF548-204ENST00000594693 ARPC5LQ9BPX5 153 aa13.15□□□□□ -0.3
ZNF548-204ENST00000594693 PSMG3Q9BT73 122 aaPredicted RBP13.15□□□□□ -0.3
ZNF548-204ENST00000594693 SEPSECSQ9HD40 501 aaKnown RBP13.15□□□□□ -0.3
ZNF548-204ENST00000594693 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
ZNF548-204ENST00000594693 OR11H12B2RN74 326 aa13.14□□□□□ -0.31
ZNF548-204ENST00000594693 ODF3L2Q3SX64 289 aa13.14□□□□□ -0.31
ZNF548-204ENST00000594693 LGALSLQ3ZCW2 172 aaPredicted RBP13.14□□□□□ -0.31
ZNF548-204ENST00000594693 FAM24BQ8N5W8 94 aa13.14□□□□□ -0.31
ZNF548-204ENST00000594693 OR2G3Q8NGZ4 309 aa13.14□□□□□ -0.31
ZNF548-204ENST00000594693 SOCS3O14543 225 aa13.13□□□□□ -0.31
ZNF548-204ENST00000594693 IGHV4-30-4P0DP06 118 aa13.13□□□□□ -0.31
ZNF548-204ENST00000594693 SERF2P84101 59 aa13.13□□□□□ -0.31
ZNF548-204ENST00000594693 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
ZNF548-204ENST00000594693 TMUB2Q71RG4 321 aa13.13□□□□□ -0.31
ZNF548-204ENST00000594693 DEFB125Q8N687 156 aa13.13□□□□□ -0.31
ZNF548-204ENST00000594693 GNPNAT1Q96EK6 184 aaPredicted RBP13.13□□□□□ -0.31
ZNF548-204ENST00000594693 UBQLN2Q9UHD9 624 aa13.13□□□□□ -0.31
ZNF548-204ENST00000594693 A0A087X0K7 114 aa13.12□□□□□ -0.31
ZNF548-204ENST00000594693 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.12□□□□□ -0.31
ZNF548-204ENST00000594693 BPIFA4PQ86YQ2 179 aa13.12□□□□□ -0.31
ZNF548-204ENST00000594693 WFDC10AQ9H1F0 79 aa13.12□□□□□ -0.31
ZNF548-204ENST00000594693 SH3BGRL3Q9H299 93 aa13.12□□□□□ -0.31
ZNF548-204ENST00000594693 MAP6D1Q9H9H5 199 aa13.12□□□□□ -0.31
ZNF548-204ENST00000594693 KANTRA0A1W2PQU2 76 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 BCL2L11O43521 198 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 M6PRP20645 277 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 MEOX2P50222 304 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 ACOT6Q3I5F7 207 aaPredicted RBP13.11□□□□□ -0.31
ZNF548-204ENST00000594693 SPATA31B1PQ5VZV4 182 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 FAM167A-AS1Q96KT0 104 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 CITED4Q96RK1 184 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 MRPL32Q9BYC8 188 aaKnown RBP13.11□□□□□ -0.31
ZNF548-204ENST00000594693 TMEM14CQ9P0S9 112 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 FUT9Q9Y231 359 aa13.11□□□□□ -0.31
ZNF548-204ENST00000594693 IGLC2P0DOY2 106 aa13.1□□□□□ -0.31
ZNF548-204ENST00000594693 ATF4P18848 351 aaPredicted RBP13.1□□□□□ -0.31
ZNF548-204ENST00000594693 DEFB131AP59861 70 aa13.1□□□□□ -0.31
ZNF548-204ENST00000594693 SAMD13Q5VXD3 122 aa13.1□□□□□ -0.31
ZNF548-204ENST00000594693 LINC00322Q6ZN03 302 aaPredicted RBP13.1□□□□□ -0.31
ZNF548-204ENST00000594693 SLC25A2Q9BXI2 301 aa13.1□□□□□ -0.31
ZNF548-204ENST00000594693 HRH4Q9H3N8 390 aa13.1□□□□□ -0.31
ZNF548-204ENST00000594693 ISLRO14498 428 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 MBP02144 154 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 ZNF688P0C7X2 276 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 SPP1P10451 314 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 ID1P41134 155 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 RAB2AP61019 212 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 SNRPD3P62318 126 aaKnown RBP13.09□□□□□ -0.31
ZNF548-204ENST00000594693 RHOBP62745 196 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 ZFP69Q49AA0 526 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 APRG1Q8IVJ8 170 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 OR10G4Q8NGN3 311 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 OR10G9Q8NGN4 311 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 OR10G7Q8NGN6 311 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 TUBA4BQ9H853 241 aa13.09□□□□□ -0.31
ZNF548-204ENST00000594693 RBMY1BA6NDE4 496 aaKnown RBP13.08□□□□□ -0.32
ZNF548-204ENST00000594693 RBMY1EA6NEQ0 496 aaKnown RBP13.08□□□□□ -0.32
ZNF548-204ENST00000594693 H3BQ15 152 aa13.08□□□□□ -0.32
ZNF548-204ENST00000594693 PFDN1O60925 122 aa13.08□□□□□ -0.32
ZNF548-204ENST00000594693 RBMY1DP0C7P1 496 aaKnown RBP13.08□□□□□ -0.32
ZNF548-204ENST00000594693 FRMD6-AS1P0C7T7 363 aa13.08□□□□□ -0.32
ZNF548-204ENST00000594693 PSMB3P49720 205 aa13.08□□□□□ -0.32
ZNF548-204ENST00000594693 RPP25LQ8N5L8 163 aaKnown RBP13.08□□□□□ -0.32
ZNF548-204ENST00000594693 C16orf92Q96LL3 132 aa13.08□□□□□ -0.32
ZNF548-204ENST00000594693 SRD5A3Q9H8P0 318 aa13.08□□□□□ -0.32
ZNF548-204ENST00000594693 PRKDCP78527 4128 aaKnown RBP13.07□□□□□ -0.32
ZNF548-204ENST00000594693 TRAV8-2A0A0B4J237 113 aa13.07□□□□□ -0.32
ZNF548-204ENST00000594693 HIST1H1EP10412 219 aaKnown RBP13.07□□□□□ -0.32
ZNF548-204ENST00000594693 ZNF124Q15973 351 aa13.07□□□□□ -0.32
ZNF548-204ENST00000594693 GUK1Q16774 197 aa13.07□□□□□ -0.32
ZNF548-204ENST00000594693 PSMG4Q5JS54 123 aa13.07□□□□□ -0.32
ZNF548-204ENST00000594693 C9orf62Q8N4C0 152 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms