RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 ATP5G1P05496 136 aa7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 GALR1P47211 349 aa7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 ATP5G3P48201 142 aa7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 FAM3BP58499 235 aaPredicted RBP7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 HIST1H1AQ02539 215 aaPredicted RBP7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 IL18Q14116 193 aa7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 THAP8Q8NA92 274 aa7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 LINC01587Q99440 93 aa7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 NOP10Q9NPE3 64 aaKnown RBP7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 MCUBQ9NWR8 336 aa7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 PFDN2Q9UHV9 154 aa7.79□□□□□ -1.16
PRKCSH-220ENST00000593104 PRSS46E5RG02 174 aa7.78□□□□□ -1.16
PRKCSH-220ENST00000593104 BOLA2-SMG1P6H3BVE0 249 aa7.78□□□□□ -1.16
PRKCSH-220ENST00000593104 PITX3O75364 302 aa7.78□□□□□ -1.16
PRKCSH-220ENST00000593104 CCL18P55774 89 aa7.78□□□□□ -1.16
PRKCSH-220ENST00000593104 CLINT1Q14677 625 aa7.78□□□□□ -1.16
PRKCSH-220ENST00000593104 PRRT1Q99946 306 aa7.78□□□□□ -1.16
PRKCSH-220ENST00000593104 Q9H8V8 135 aa7.78□□□□□ -1.16
PRKCSH-220ENST00000593104 KCNIP3Q9Y2W7 256 aa7.78□□□□□ -1.16
PRKCSH-220ENST00000593104 TRAV26-1A0A087WT03 109 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 ANKRD20A5PA0PJZ0 165 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 WRBO00258 174 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 FABP1P07148 127 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 HOXA5P20719 270 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 ALDH3B2P48448 385 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 MEOX2P50222 304 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 RHOBP62745 196 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 AKR1C1Q04828 323 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 SSBP1Q04837 148 aaKnown RBP7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 OR5I1Q13606 314 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 ACOT7LQ6ZUV0 252 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 TMED4Q7Z7H5 227 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 DIRAS2Q96HU8 199 aa7.77□□□□□ -1.17
PRKCSH-220ENST00000593104 CBY3A6NI87 242 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 H3BRN7 92 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 CCNKO75909 580 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 DUSP14O95147 198 aaKnown RBP7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 TSPOP30536 169 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 RAB11AP62491 216 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 SPANXN5Q5MJ07 72 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 GPR141Q7Z602 305 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 C15orf40Q8WUR7 153 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 TMEM147Q9BVK8 224 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 ZNF586Q9NXT0 402 aa7.76□□□□□ -1.17
PRKCSH-220ENST00000593104 SMCO3A2RU48 225 aa7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 H3BTX0 84 aa7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 J3KRW8 73 aa7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 CXCL3P19876 107 aa7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 MRPS10P82664 201 aaKnown RBP7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 ESRGQ1W209 222 aa7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 GGNBP1Q5YKI7 109 aa7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 BPIFCQ8NFQ6 507 aa7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 OR8A1Q8NGG7 326 aa7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 RNASE8Q8TDE3 154 aaKnown RBP7.75□□□□□ -1.17
PRKCSH-220ENST00000593104 GAGE12BA1L429 117 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 PRAC2D3DTV9 90 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 CTDSPLO15194 276 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 GAGE7O76087 117 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 HOXB5P09067 269 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 OR5G3P0C626 314 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 GAGE12FP0CL80 117 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 GAGE12GP0CL81 117 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 GAGE12IP0CL82 117 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 VAMP1P23763 118 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 TAS2R60P59551 318 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 CYP2G1PQ6ZSU1 146 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 TMEM144Q7Z5S9 345 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 GNPNAT1Q96EK6 184 aaPredicted RBP7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 C16orf74Q96GX8 76 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 SHANK2-AS3Q9BTD1 123 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 PPP1R14DQ9NXH3 145 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 SCP2D1Q9UJQ7 156 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 TIMM8BQ9Y5J9 83 aaPredicted RBP7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 TNFRSF18Q9Y5U5 241 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 DNAH5Q8TE73 4624 aa7.74□□□□□ -1.17
PRKCSH-220ENST00000593104 ZNF701M0R085 212 aaPredicted RBP7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 SYNGR2O43760 224 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 IL5P05113 134 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 LINC00869P0C866 280 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 ANXA3P12429 323 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 ATP5IP56385 69 aaPredicted RBP7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 RRAS2P62070 204 aaPredicted RBP7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 PSG3Q16557 428 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 SAMD13Q5VXD3 122 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 OR4D5Q8NGN0 318 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 RPUSD4Q96CM3 377 aaKnown RBP7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 Q9H3A6 140 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 CACFD1Q9UGQ2 172 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 SLC45A2Q9UMX9 530 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 HIGD1AQ9Y241 93 aa7.73□□□□□ -1.17
PRKCSH-220ENST00000593104 LINC00854A0A1B0GVQ3 168 aa7.72□□□□□ -1.17
PRKCSH-220ENST00000593104 MRPS12O15235 138 aaKnown RBP7.72□□□□□ -1.17
PRKCSH-220ENST00000593104 CDKN1BP46527 198 aa7.72□□□□□ -1.17
PRKCSH-220ENST00000593104 LINC00315P59091 139 aa7.72□□□□□ -1.17
PRKCSH-220ENST00000593104 POLR2GP62487 172 aaKnown RBP eCLIP7.72□□□□□ -1.17
PRKCSH-220ENST00000593104 SRPXP78539 464 aa7.72□□□□□ -1.17
PRKCSH-220ENST00000593104 PPP1R1AQ13522 171 aa7.72□□□□□ -1.17
PRKCSH-220ENST00000593104 GFI1BQ5VTD9 330 aa7.72□□□□□ -1.17
PRKCSH-220ENST00000593104 PATE2Q6UY27 113 aa7.72□□□□□ -1.17
PRKCSH-220ENST00000593104 RXFP4Q8TDU9 374 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms