RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 A8MZ25 164 aa11.12□□□□□ -0.63
DDX39A-221ENST00000593026 ARPC5O15511 151 aa11.12□□□□□ -0.63
DDX39A-221ENST00000593026 FRMD6-AS1P0C7T7 363 aa11.12□□□□□ -0.63
DDX39A-221ENST00000593026 ZNF266Q14584 549 aa11.12□□□□□ -0.63
DDX39A-221ENST00000593026 FAM24BQ8N5W8 94 aa11.12□□□□□ -0.63
DDX39A-221ENST00000593026 TMEM37Q8WXS4 190 aa11.12□□□□□ -0.63
DDX39A-221ENST00000593026 B9D2Q9BPU9 175 aa11.12□□□□□ -0.63
DDX39A-221ENST00000593026 RSG1Q9BU20 258 aa11.12□□□□□ -0.63
DDX39A-221ENST00000593026 MAP6D1Q9H9H5 199 aa11.12□□□□□ -0.63
DDX39A-221ENST00000593026 ZNF688P0C7X2 276 aa11.11□□□□□ -0.63
DDX39A-221ENST00000593026 RPL7P18124 248 aaKnown RBP11.11□□□□□ -0.63
DDX39A-221ENST00000593026 GATAD1Q8WUU5 269 aa11.11□□□□□ -0.63
DDX39A-221ENST00000593026 MEOX2P50222 304 aa11.1□□□□□ -0.63
DDX39A-221ENST00000593026 DEFB131AP59861 70 aa11.1□□□□□ -0.63
DDX39A-221ENST00000593026 SNRPD3P62318 126 aaKnown RBP11.1□□□□□ -0.63
DDX39A-221ENST00000593026 MORN5Q5VZ52 161 aa11.1□□□□□ -0.63
DDX39A-221ENST00000593026 APRG1Q8IVJ8 170 aa11.1□□□□□ -0.63
DDX39A-221ENST00000593026 MFFQ9GZY8 342 aa11.1□□□□□ -0.63
DDX39A-221ENST00000593026 TGP01266 2768 aa11.09□□□□□ -0.63
DDX39A-221ENST00000593026 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
DDX39A-221ENST00000593026 GCSAMLQ5JQS6 135 aa11.09□□□□□ -0.63
DDX39A-221ENST00000593026 SAMD13Q5VXD3 122 aa11.09□□□□□ -0.63
DDX39A-221ENST00000593026 ST6GAL2Q96JF0 529 aa11.09□□□□□ -0.63
DDX39A-221ENST00000593026 CITED4Q96RK1 184 aa11.09□□□□□ -0.63
DDX39A-221ENST00000593026 SEPSECSQ9HD40 501 aaKnown RBP11.09□□□□□ -0.63
DDX39A-221ENST00000593026 BORCS7-ASMTA0A0B4J1R7 106 aa11.08□□□□□ -0.64
DDX39A-221ENST00000593026 PSMG4Q5JS54 123 aa11.08□□□□□ -0.64
DDX39A-221ENST00000593026 FFAR4Q5NUL3 377 aa11.08□□□□□ -0.64
DDX39A-221ENST00000593026 FAM78BQ5VT40 261 aa11.08□□□□□ -0.64
DDX39A-221ENST00000593026 AKAP14Q86UN6 197 aa11.08□□□□□ -0.64
DDX39A-221ENST00000593026 BPIFA4PQ86YQ2 179 aa11.08□□□□□ -0.64
DDX39A-221ENST00000593026 HSD17B11Q8NBQ5 300 aa11.08□□□□□ -0.64
DDX39A-221ENST00000593026 OR11H4Q8NGC9 324 aa11.08□□□□□ -0.64
DDX39A-221ENST00000593026 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
DDX39A-221ENST00000593026 PRKDCP78527 4128 aaKnown RBP11.07□□□□□ -0.64
DDX39A-221ENST00000593026 RBMY1BA6NDE4 496 aaKnown RBP11.07□□□□□ -0.64
DDX39A-221ENST00000593026 RBMY1EA6NEQ0 496 aaKnown RBP11.07□□□□□ -0.64
DDX39A-221ENST00000593026 HMSDA8MTL9 139 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 ISLRO14498 428 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 SOCS3O14543 225 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 TAAR5O14804 337 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 RBMY1DP0C7P1 496 aaKnown RBP11.07□□□□□ -0.64
DDX39A-221ENST00000593026 ID1P41134 155 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 PSMB3P49720 205 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 ZNF345Q14585 488 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 ZNF124Q15973 351 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 RPL7L1Q6DKI1 246 aaKnown RBP11.07□□□□□ -0.64
DDX39A-221ENST00000593026 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 TCTE3Q8IZS6 198 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 C16orf92Q96LL3 132 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 ASCL2Q99929 193 aa11.07□□□□□ -0.64
DDX39A-221ENST00000593026 A0A087X0K7 114 aa11.06□□□□□ -0.64
DDX39A-221ENST00000593026 LOC102724200A0A096LPH7 203 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-221ENST00000593026 TRAV5A0A0B4J249 113 aa11.06□□□□□ -0.64
DDX39A-221ENST00000593026 MRPS12O15235 138 aaKnown RBP11.06□□□□□ -0.64
DDX39A-221ENST00000593026 LINC00322Q6ZN03 302 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-221ENST00000593026 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
DDX39A-221ENST00000593026 KCNRGQ8N5I3 272 aa11.06□□□□□ -0.64
DDX39A-221ENST00000593026 C17orf77Q96MU5 243 aa11.06□□□□□ -0.64
DDX39A-221ENST00000593026 MRPL32Q9BYC8 188 aaKnown RBP11.06□□□□□ -0.64
DDX39A-221ENST00000593026 RFNGQ9Y644 331 aa11.06□□□□□ -0.64
DDX39A-221ENST00000593026 A0A1B0GVG6 124 aa11.05□□□□□ -0.64
DDX39A-221ENST00000593026 ATP6V0CP27449 155 aa11.05□□□□□ -0.64
DDX39A-221ENST00000593026 HAGHQ16775 308 aa11.05□□□□□ -0.64
DDX39A-221ENST00000593026 ACOT6Q3I5F7 207 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-221ENST00000593026 SPATA31B1PQ5VZV4 182 aa11.05□□□□□ -0.64
DDX39A-221ENST00000593026 LRRC20Q8TCA0 184 aa11.05□□□□□ -0.64
DDX39A-221ENST00000593026 LINC00052Q96N35 136 aa11.05□□□□□ -0.64
DDX39A-221ENST00000593026 PSMG3Q9BT73 122 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-221ENST00000593026 FUT9Q9Y231 359 aa11.05□□□□□ -0.64
DDX39A-221ENST00000593026 A0A0D9SG52 128 aa11.04□□□□□ -0.64
DDX39A-221ENST00000593026 JTBO76095 146 aa11.04□□□□□ -0.64
DDX39A-221ENST00000593026 NHLRC4P0CG21 123 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-221ENST00000593026 CXCL2P19875 107 aa11.04□□□□□ -0.64
DDX39A-221ENST00000593026 M6PRP20645 277 aa11.04□□□□□ -0.64
DDX39A-221ENST00000593026 RHOBP62745 196 aa11.04□□□□□ -0.64
DDX39A-221ENST00000593026 MIR17HGQ75NE6 70 aa11.04□□□□□ -0.64
DDX39A-221ENST00000593026 OR2G3Q8NGZ4 309 aa11.04□□□□□ -0.64
DDX39A-221ENST00000593026 GNPNAT1Q96EK6 184 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-221ENST00000593026 KNCNA6PVL3 124 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 SNRPCP09234 159 aaKnown RBP11.03□□□□□ -0.64
DDX39A-221ENST00000593026 IGLC2P0DOY2 106 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 RPL35AP18077 110 aaKnown RBP11.03□□□□□ -0.64
DDX39A-221ENST00000593026 APOC4P55056 127 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 ACTL10Q5JWF8 245 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 LCN15Q6UWW0 184 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 STHQ8IWL8 128 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 ARPC5LQ9BPX5 153 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 SLC25A2Q9BXI2 301 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 SH3BGRL3Q9H299 93 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 HRH4Q9H3N8 390 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 TMEM14CQ9P0S9 112 aa11.03□□□□□ -0.64
DDX39A-221ENST00000593026 KIR2DL5BA0A0G2JN68 375 aa11.02□□□□□ -0.65
DDX39A-221ENST00000593026 KIR2DL5BA0A0G2JPC4 375 aa11.02□□□□□ -0.65
DDX39A-221ENST00000593026 KANTRA0A1W2PQU2 76 aa11.02□□□□□ -0.65
DDX39A-221ENST00000593026 H3BQ15 152 aa11.02□□□□□ -0.65
DDX39A-221ENST00000593026 H3BTX0 84 aa11.02□□□□□ -0.65
DDX39A-221ENST00000593026 C1QBP02746 253 aa11.02□□□□□ -0.65
DDX39A-221ENST00000593026 RAB2AP61019 212 aa11.02□□□□□ -0.65
DDX39A-221ENST00000593026 SERF2P84101 59 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms