RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.43□□□□□ -0.26
CCDC43-205ENST00000592333 MAGT1Q9H0U3 335 aa13.43□□□□□ -0.26
CCDC43-205ENST00000592333 FNDC10F2Z333 226 aa13.42□□□□□ -0.26
CCDC43-205ENST00000592333 F6UB75 175 aa13.42□□□□□ -0.26
CCDC43-205ENST00000592333 RPL7P18124 248 aaKnown RBP13.42□□□□□ -0.26
CCDC43-205ENST00000592333 SPANXN2Q5MJ10 180 aa13.42□□□□□ -0.26
CCDC43-205ENST00000592333 C20orf173Q96LM9 149 aa13.42□□□□□ -0.26
CCDC43-205ENST00000592333 C17orf77Q96MU5 243 aa13.42□□□□□ -0.26
CCDC43-205ENST00000592333 YTHDF2Q9Y5A9 579 aaKnown RBP13.42□□□□□ -0.26
CCDC43-205ENST00000592333 A0A1B0GVY2 172 aa13.41□□□□□ -0.26
CCDC43-205ENST00000592333 TSPOP30536 169 aa13.41□□□□□ -0.26
CCDC43-205ENST00000592333 FAM3BP58499 235 aaPredicted RBP13.41□□□□□ -0.26
CCDC43-205ENST00000592333 RAP2BP61225 183 aa13.41□□□□□ -0.26
CCDC43-205ENST00000592333 ACOT7LQ6ZUV0 252 aa13.41□□□□□ -0.26
CCDC43-205ENST00000592333 SHANK2-AS3Q9BTD1 123 aa13.41□□□□□ -0.26
CCDC43-205ENST00000592333 SCRT1Q9BWW7 348 aa13.41□□□□□ -0.26
CCDC43-205ENST00000592333 C9orf170A2RU37 121 aa13.4□□□□□ -0.26
CCDC43-205ENST00000592333 H3BRN7 92 aa13.4□□□□□ -0.26
CCDC43-205ENST00000592333 ZNF701M0R085 212 aaPredicted RBP13.4□□□□□ -0.26
CCDC43-205ENST00000592333 NDUFB6O95139 128 aa13.4□□□□□ -0.26
CCDC43-205ENST00000592333 IL5P05113 134 aa13.4□□□□□ -0.26
CCDC43-205ENST00000592333 TMEM182Q6ZP80 229 aaPredicted RBP13.4□□□□□ -0.26
CCDC43-205ENST00000592333 CYP2G1PQ6ZSU1 146 aa13.4□□□□□ -0.26
CCDC43-205ENST00000592333 SMIM8Q96KF7 97 aa13.4□□□□□ -0.26
CCDC43-205ENST00000592333 TMEM208Q9BTX3 173 aa13.4□□□□□ -0.26
CCDC43-205ENST00000592333 SLC25A39Q9BZJ4 359 aaPredicted RBP13.4□□□□□ -0.26
CCDC43-205ENST00000592333 LYRM9A8MSI8 78 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 K7EPK0 472 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 HYPMO75409 117 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 INSP01308 110 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 GATA2P23769 480 aaPredicted RBP13.39□□□□□ -0.27
CCDC43-205ENST00000592333 CNN1P51911 297 aaKnown RBP13.39□□□□□ -0.27
CCDC43-205ENST00000592333 DAD1P61803 113 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 PXDC1Q5TGL8 231 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 UBE2DNLQ8IWF7 75 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 C15orf53Q8NAA6 179 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 OR11H7Q8NGC8 314 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 KRTAP17-1Q9BYP8 105 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 SRRQ9GZT4 340 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 NPVFQ9HCQ7 196 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 PSENENQ9NZ42 101 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 HIGD1AQ9Y241 93 aa13.39□□□□□ -0.27
CCDC43-205ENST00000592333 A0A087X0K7 114 aa13.38□□□□□ -0.27
CCDC43-205ENST00000592333 TRAV8-2A0A0B4J237 113 aa13.38□□□□□ -0.27
CCDC43-205ENST00000592333 PRSS29PA6NIE9 313 aa13.38□□□□□ -0.27
CCDC43-205ENST00000592333 PMS2P5A8MQ11 134 aa13.38□□□□□ -0.27
CCDC43-205ENST00000592333 TAS2R30P59541 319 aa13.38□□□□□ -0.27
CCDC43-205ENST00000592333 DLK1P80370 383 aa13.38□□□□□ -0.27
CCDC43-205ENST00000592333 CNPY1Q3B7I2 92 aa13.38□□□□□ -0.27
CCDC43-205ENST00000592333 Q6ZR54 194 aa13.38□□□□□ -0.27
CCDC43-205ENST00000592333 H3BP45 60 aa13.37□□□□□ -0.27
CCDC43-205ENST00000592333 RTL8CO15255 209 aa13.37□□□□□ -0.27
CCDC43-205ENST00000592333 CRXO43186 299 aaPredicted RBP13.37□□□□□ -0.27
CCDC43-205ENST00000592333 INPP1P49441 399 aa13.37□□□□□ -0.27
CCDC43-205ENST00000592333 POLR2GP62487 172 aaKnown RBP eCLIP13.37□□□□□ -0.27
CCDC43-205ENST00000592333 C4orf46Q504U0 113 aa13.37□□□□□ -0.27
CCDC43-205ENST00000592333 SOHLH1Q5JUK2 328 aa13.37□□□□□ -0.27
CCDC43-205ENST00000592333 TMEM256Q8N2U0 113 aa13.37□□□□□ -0.27
CCDC43-205ENST00000592333 CCDC160A6NGH7 325 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 ADAP1O75689 374 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 OR4E1P0C645 316 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 LINC00869P0C866 280 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 MED14OSP0DP75 135 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 CXCL2P19875 107 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 TMEM14EPQ6UXP3 125 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 GSG1LQ6UXU4 331 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 OR10P1Q8NGE3 313 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 FAT2Q9NYQ8 4349 aa13.36□□□□□ -0.27
CCDC43-205ENST00000592333 SMCO3A2RU48 225 aa13.35□□□□□ -0.27
CCDC43-205ENST00000592333 CENPXA8MT69 81 aa13.35□□□□□ -0.27
CCDC43-205ENST00000592333 TSC22D2O75157 780 aa13.35□□□□□ -0.27
CCDC43-205ENST00000592333 TRIQKQ629K1 86 aa13.35□□□□□ -0.27
CCDC43-205ENST00000592333 TEPPQ6URK8 271 aa13.35□□□□□ -0.27
CCDC43-205ENST00000592333 GGACTQ9BVM4 153 aa13.35□□□□□ -0.27
CCDC43-205ENST00000592333 RBM38Q9H0Z9 239 aaKnown RBP13.35□□□□□ -0.27
CCDC43-205ENST00000592333 KIAA1109Q2LD37 5005 aa13.35□□□□□ -0.27
CCDC43-205ENST00000592333 DNAH2Q9P225 4427 aa13.34□□□□□ -0.27
CCDC43-205ENST00000592333 BOLA2-SMG1P6H3BVE0 249 aa13.34□□□□□ -0.27
CCDC43-205ENST00000592333 CXCL3P19876 107 aa13.34□□□□□ -0.27
CCDC43-205ENST00000592333 FGL1Q08830 312 aa13.34□□□□□ -0.27
CCDC43-205ENST00000592333 SPINK13Q1W4C9 94 aa13.34□□□□□ -0.27
CCDC43-205ENST00000592333 ZNF738Q8NE65 137 aa13.34□□□□□ -0.27
CCDC43-205ENST00000592333 MGAT4CQ9UBM8 478 aa13.34□□□□□ -0.27
CCDC43-205ENST00000592333 M0R2N4 97 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 M0R2Z0 102 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 SSSCA1O60232 199 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 OR5G3P0C626 314 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 HTN3P15516 51 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 PSG3Q16557 428 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 TMEM88Q6PEY1 159 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 RNF182Q8N6D2 247 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 OR8A1Q8NGG7 326 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 DNAH17Q9UFH2 4485 aa13.33□□□□□ -0.28
CCDC43-205ENST00000592333 TAS2R60P59551 318 aa13.32□□□□□ -0.28
CCDC43-205ENST00000592333 BAK1Q16611 211 aa13.32□□□□□ -0.28
CCDC43-205ENST00000592333 IGFL4Q6B9Z1 124 aa13.32□□□□□ -0.28
CCDC43-205ENST00000592333 ZNF546Q86UE3 836 aa13.32□□□□□ -0.28
CCDC43-205ENST00000592333 LRRC20Q8TCA0 184 aa13.32□□□□□ -0.28
CCDC43-205ENST00000592333 C20orf144Q9BQM9 153 aa13.32□□□□□ -0.28
CCDC43-205ENST00000592333 SLC50A1Q9BRV3 221 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms