RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 RUSC1-AS1Q66K80 236 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 LHFPL4Q7Z7J7 247 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 TEX45Q8NA69 505 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 TMEM116Q8NCL8 245 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 C8orf46Q8TAG6 207 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 NDFIP1Q9BT67 221 aa8.65□□□□□ -1.02
VPS4B-206ENST00000591475 KMT2BQ9UMN6 2715 aaPredicted RBP8.65□□□□□ -1.03
VPS4B-206ENST00000591475 ICE1Q9Y2F5 2266 aa8.65□□□□□ -1.03
VPS4B-206ENST00000591475 HSBP1L1C9JCN9 74 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 TMEM178BH3BS89 294 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 LIPFP07098 398 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 CD24P25063 80 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 RPL27AP46776 148 aaKnown RBP8.64□□□□□ -1.03
VPS4B-206ENST00000591475 PCP4P48539 62 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 FBLN7Q53RD9 439 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 Q86TA4 180 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 ITLN2Q8WWU7 325 aaPredicted RBP8.64□□□□□ -1.03
VPS4B-206ENST00000591475 RITA1Q96K30 269 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 OTORQ9NRC9 128 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 ZNF462Q96JM2 2506 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 ARFGEF3Q5TH69 2177 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 NPIPB6E9PJ23 425 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 H3BTX0 84 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 HAX1O00165 279 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 ADIPOQQ15848 244 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 LYPD2Q6UXB3 125 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 LINC00173Q6ZV60 143 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 MAP1LC3CQ9BXW4 147 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 HIGD1AQ9Y241 93 aa8.64□□□□□ -1.03
VPS4B-206ENST00000591475 IGHV2-70DA0A0C4DH43 119 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 K7EP13 123 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 COL8A1P27658 744 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
VPS4B-206ENST00000591475 DLX6P56179 175 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 PAX2Q02962 417 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 BSPH1Q075Z2 132 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 SLC25A34Q6PIV7 304 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 PET117Q6UWS5 81 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 PLCE1Q9P212 2302 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.63□□□□□ -1.03
VPS4B-206ENST00000591475 IGHV3-21A0A0B4J1V1 117 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 hDV102S1A0JD36 115 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 TNFRSF13BO14836 293 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-206ENST00000591475 LOXP28300 417 aaPredicted RBP8.63□□□□□ -1.03
VPS4B-206ENST00000591475 C21orf62-AS1Q17RA5 79 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 LINC01560Q8TB33 94 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 RNASE8Q8TDE3 154 aaKnown RBP8.63□□□□□ -1.03
VPS4B-206ENST00000591475 CCL17Q92583 94 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 TMEM14CQ9P0S9 112 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 HSPB8Q9UJY1 196 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 CHD6Q8TD26 2715 aa8.63□□□□□ -1.03
VPS4B-206ENST00000591475 ANKHD1Q8IWZ3 2542 aaKnown RBP8.63□□□□□ -1.03
VPS4B-206ENST00000591475 MYO18BQ8IUG5 2567 aa8.62□□□□□ -1.03
VPS4B-206ENST00000591475 IGHV3-72A0A0B4J1Y9 119 aa8.62□□□□□ -1.03
VPS4B-206ENST00000591475 IGHV1-8P0DP01 117 aa8.62□□□□□ -1.03
VPS4B-206ENST00000591475 LYZP61626 148 aa8.62□□□□□ -1.03
VPS4B-206ENST00000591475 TMEM155Q4W5P6 130 aa8.62□□□□□ -1.03
VPS4B-206ENST00000591475 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
VPS4B-206ENST00000591475 CIARTQ8N365 385 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-206ENST00000591475 OR4C5Q8NGB2 326 aa8.62□□□□□ -1.03
VPS4B-206ENST00000591475 GSX1Q9H4S2 264 aaPredicted RBP8.62□□□□□ -1.03
VPS4B-206ENST00000591475 FLNCQ14315 2725 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 LOC105371242A0A075B767 164 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 TRAV30A0A087WSZ9 112 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 TRBV6-1A0A0K0K1D8 114 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 CRYGBP07316 175 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 APELAP0DMC3 54 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 HTR1DP28221 377 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 VAMP3Q15836 100 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 C16orf54Q6UWD8 224 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 GOLT1AQ6ZVE7 132 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 PRNTQ86SH4 94 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 TMEM190Q8WZ59 177 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 TMEM133Q9H2Q1 129 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 MS4A6AQ9H2W1 248 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 SCRT2Q9NQ03 307 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 CTSZQ9UBR2 303 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 F11RQ9Y624 299 aaKnown RBP8.61□□□□□ -1.03
VPS4B-206ENST00000591475 TRAV8-1A0A0A6YYK1 113 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.61□□□□□ -1.03
VPS4B-206ENST00000591475 VSTM5A8MXK1 200 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 NUDT3O95989 172 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 APOHP02749 345 aaPredicted RBP8.61□□□□□ -1.03
VPS4B-206ENST00000591475 PSG1P11464 419 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 RBX1P62877 108 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 RIGQ13278 110 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 BVES-AS1Q5T3Y7 98 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 C12orf54Q6X4T0 127 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 TMUB1Q9BVT8 246 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 SLC25A39Q9BZJ4 359 aaPredicted RBP8.61□□□□□ -1.03
VPS4B-206ENST00000591475 SIGLEC9Q9Y336 463 aa8.61□□□□□ -1.03
VPS4B-206ENST00000591475 A0A1B0GUT8 65 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 IGLV2-11P01706 119 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 HLA-DRB1P01911 266 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 CD3EP07766 207 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 HOXB4P17483 251 aaPredicted RBP8.6□□□□□ -1.03
VPS4B-206ENST00000591475 CNTFRP26992 372 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 ZNF138P52744 262 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 EXOC3-AS1Q8N2X6 119 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 TNFRSF14Q92956 283 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms