RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 LOC102724200A0A096LPH7 203 aaPredicted RBP15.81■□□□□ 0.12
ATG4D-212ENST00000590096 ZNF688P0C7X2 276 aa15.81■□□□□ 0.12
ATG4D-212ENST00000590096 RPL7P18124 248 aaKnown RBP15.81■□□□□ 0.12
ATG4D-212ENST00000590096 HAGHQ16775 308 aa15.81■□□□□ 0.12
ATG4D-212ENST00000590096 Q5BKY6 102 aa15.81■□□□□ 0.12
ATG4D-212ENST00000590096 LINC00322Q6ZN03 302 aaPredicted RBP15.81■□□□□ 0.12
ATG4D-212ENST00000590096 LINC00305Q7Z4B0 112 aa15.81■□□□□ 0.12
ATG4D-212ENST00000590096 PFDN5Q99471 154 aa15.81■□□□□ 0.12
ATG4D-212ENST00000590096 KCNIP2Q9NS61 270 aa15.81■□□□□ 0.12
ATG4D-212ENST00000590096 C17orf112F2Z3M2 114 aa15.8■□□□□ 0.12
ATG4D-212ENST00000590096 INO80EQ8NBZ0 244 aaPredicted RBP15.8■□□□□ 0.12
ATG4D-212ENST00000590096 SCGB1C1Q8TD33 95 aa15.8■□□□□ 0.12
ATG4D-212ENST00000590096 ZMAT4Q9H898 229 aa15.8■□□□□ 0.12
ATG4D-212ENST00000590096 SEPSECSQ9HD40 501 aaKnown RBP15.8■□□□□ 0.12
ATG4D-212ENST00000590096 DNAJC4Q9NNZ3 241 aa15.8■□□□□ 0.12
ATG4D-212ENST00000590096 FXYD6-FXYD2A0A087WZ82 144 aa15.79■□□□□ 0.12
ATG4D-212ENST00000590096 ATF4P18848 351 aaPredicted RBP15.79■□□□□ 0.12
ATG4D-212ENST00000590096 ID1P41134 155 aa15.79■□□□□ 0.12
ATG4D-212ENST00000590096 MEOX2P50222 304 aa15.79■□□□□ 0.12
ATG4D-212ENST00000590096 ZNF124Q15973 351 aa15.79■□□□□ 0.12
ATG4D-212ENST00000590096 PSMG4Q5JS54 123 aa15.79■□□□□ 0.12
ATG4D-212ENST00000590096 SAMD13Q5VXD3 122 aa15.79■□□□□ 0.12
ATG4D-212ENST00000590096 TMEM37Q8WXS4 190 aa15.79■□□□□ 0.12
ATG4D-212ENST00000590096 AQP10Q96PS8 301 aa15.79■□□□□ 0.12
ATG4D-212ENST00000590096 RSG1Q9BU20 258 aa15.79■□□□□ 0.12
ATG4D-212ENST00000590096 APOC4P55056 127 aa15.77■□□□□ 0.12
ATG4D-212ENST00000590096 SPATA25Q9BR10 227 aa15.77■□□□□ 0.12
ATG4D-212ENST00000590096 TM2D3Q9BRN9 247 aa15.77■□□□□ 0.12
ATG4D-212ENST00000590096 RPL35AP18077 110 aaKnown RBP15.76■□□□□ 0.11
ATG4D-212ENST00000590096 PSMB3P49720 205 aa15.76■□□□□ 0.11
ATG4D-212ENST00000590096 GATAD1Q8WUU5 269 aa15.76■□□□□ 0.11
ATG4D-212ENST00000590096 C16orf92Q96LL3 132 aa15.76■□□□□ 0.11
ATG4D-212ENST00000590096 PARD6GQ9BYG4 376 aaPredicted RBP15.76■□□□□ 0.11
ATG4D-212ENST00000590096 WFDC1Q9HC57 220 aa15.76■□□□□ 0.11
ATG4D-212ENST00000590096 ISLRO14498 428 aa15.75■□□□□ 0.11
ATG4D-212ENST00000590096 ZNF266Q14584 549 aa15.75■□□□□ 0.11
ATG4D-212ENST00000590096 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.75■□□□□ 0.11
ATG4D-212ENST00000590096 BPIFA4PQ86YQ2 179 aa15.75■□□□□ 0.11
ATG4D-212ENST00000590096 STHQ8IWL8 128 aa15.75■□□□□ 0.11
ATG4D-212ENST00000590096 LINC00052Q96N35 136 aa15.75■□□□□ 0.11
ATG4D-212ENST00000590096 TNFSF18Q9UNG2 199 aa15.75■□□□□ 0.11
ATG4D-212ENST00000590096 U3KQK5 164 aa15.75■□□□□ 0.11
ATG4D-212ENST00000590096 SOCS3O14543 225 aa15.74■□□□□ 0.11
ATG4D-212ENST00000590096 COL7A1Q02388 2944 aa15.73■□□□□ 0.11
ATG4D-212ENST00000590096 KIR2DL5BA0A0G2JN68 375 aa15.73■□□□□ 0.11
ATG4D-212ENST00000590096 KIR2DL5BA0A0G2JPC4 375 aa15.73■□□□□ 0.11
ATG4D-212ENST00000590096 MORN5Q5VZ52 161 aa15.73■□□□□ 0.11
ATG4D-212ENST00000590096 KIR2DL5AQ8N109 375 aa15.73■□□□□ 0.11
ATG4D-212ENST00000590096 KIR2DL5BQ8NHK3 375 aa15.73■□□□□ 0.11
ATG4D-212ENST00000590096 LRRC20Q8TCA0 184 aa15.73■□□□□ 0.11
ATG4D-212ENST00000590096 NBEAL2Q6ZNJ1 2754 aa15.73■□□□□ 0.11
ATG4D-212ENST00000590096 A0A087X0K7 114 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 RNF222A6NCQ9 220 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 KNCNA6PVL3 124 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 G3V3Q6 166 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 SMLR1H3BR10 107 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 UBE2CO00762 179 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 GCSAMLQ5JQS6 135 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 ACTL10Q5JWF8 245 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 Q6ZNX1 250 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 RCHY1Q96PM5 261 aa15.72■□□□□ 0.11
ATG4D-212ENST00000590096 HUWE1Q7Z6Z7 4374 aaKnown RBP15.71■□□□□ 0.11
ATG4D-212ENST00000590096 TRAV5A0A0B4J249 113 aa15.71■□□□□ 0.11
ATG4D-212ENST00000590096 FFAR4Q5NUL3 377 aa15.71■□□□□ 0.11
ATG4D-212ENST00000590096 FAM78BQ5VT40 261 aa15.71■□□□□ 0.11
ATG4D-212ENST00000590096 C17orf77Q96MU5 243 aa15.71■□□□□ 0.11
ATG4D-212ENST00000590096 MRPS12O15235 138 aaKnown RBP15.7■□□□□ 0.1
ATG4D-212ENST00000590096 ARPC5O15511 151 aa15.7■□□□□ 0.1
ATG4D-212ENST00000590096 LCN15Q6UWW0 184 aa15.7■□□□□ 0.1
ATG4D-212ENST00000590096 CSTL1Q9H114 145 aa15.7■□□□□ 0.1
ATG4D-212ENST00000590096 RPRMQ9NS64 109 aa15.7■□□□□ 0.1
ATG4D-212ENST00000590096 CXCL2P19875 107 aa15.69■□□□□ 0.1
ATG4D-212ENST00000590096 TRPT1Q86TN4 253 aaKnown RBP15.69■□□□□ 0.1
ATG4D-212ENST00000590096 HSD17B11Q8NBQ5 300 aa15.69■□□□□ 0.1
ATG4D-212ENST00000590096 MRPL32Q9BYC8 188 aaKnown RBP15.69■□□□□ 0.1
ATG4D-212ENST00000590096 TIMM9Q9Y5J7 89 aa15.69■□□□□ 0.1
ATG4D-212ENST00000590096 BORCS7-ASMTA0A0B4J1R7 106 aa15.68■□□□□ 0.1
ATG4D-212ENST00000590096 FOXI2Q6ZQN5 318 aa15.68■□□□□ 0.1
ATG4D-212ENST00000590096 Q6ZWC4 215 aa15.68■□□□□ 0.1
ATG4D-212ENST00000590096 MFFQ9GZY8 342 aa15.68■□□□□ 0.1
ATG4D-212ENST00000590096 RETNQ9HD89 108 aa15.68■□□□□ 0.1
ATG4D-212ENST00000590096 AGRNO00468 2067 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 TRAV8-2A0A0B4J237 113 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 SNRPCP09234 159 aaKnown RBP15.67■□□□□ 0.1
ATG4D-212ENST00000590096 HLA-DRB4P13762 266 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 IGFL4Q6B9Z1 124 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 EBLN2Q6P2I7 272 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 MIR17HGQ75NE6 70 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 C20orf173Q96LM9 149 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 SLC50A1Q9BRV3 221 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 HRH4Q9H3N8 390 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 SAV1Q9H4B6 383 aaPredicted RBP15.67■□□□□ 0.1
ATG4D-212ENST00000590096 TMEM14CQ9P0S9 112 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 FUT9Q9Y231 359 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 HLA-DRB4X5D2U9 266 aa15.67■□□□□ 0.1
ATG4D-212ENST00000590096 CA1P00915 261 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-212ENST00000590096 IGLC2P0DOY2 106 aa15.66■□□□□ 0.1
ATG4D-212ENST00000590096 SPP1P10451 314 aa15.66■□□□□ 0.1
ATG4D-212ENST00000590096 GUK1Q16774 197 aa15.66■□□□□ 0.1
ATG4D-212ENST00000590096 DEFB135Q30KP9 77 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms